RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
UBXN1-217ENST00000534176 LARP1Q6PKG0 1096 aaKnown RBP21.49■■□□□ 1.03
UBXN1-217ENST00000534176 NME9Q86XW9 330 aa21.49■■□□□ 1.03
UBXN1-217ENST00000534176 COG3Q96JB2 828 aa21.49■■□□□ 1.03
UBXN1-217ENST00000534176 WDR17Q8IZU2 1322 aa21.49■■□□□ 1.03
UBXN1-217ENST00000534176 OVOS2A0A0J9YW53 1432 aa21.48■■□□□ 1.03
UBXN1-217ENST00000534176 OVOS2Q6IE36 1432 aa21.48■■□□□ 1.03
UBXN1-217ENST00000534176 ZBTB7CA1YPR0 619 aa21.48■■□□□ 1.03
UBXN1-217ENST00000534176 COL18A1P39060 1754 aa21.47■■□□□ 1.03
UBXN1-217ENST00000534176 TOM1L2Q6ZVM7 507 aa21.47■■□□□ 1.03
UBXN1-217ENST00000534176 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
UBXN1-217ENST00000534176 PDE3BQ13370 1112 aa21.45■■□□□ 1.02
UBXN1-217ENST00000534176 EP400Q96L91 3159 aa21.45■■□□□ 1.02
UBXN1-217ENST00000534176 SOX12O15370 315 aa21.44■■□□□ 1.02
UBXN1-217ENST00000534176 FAM196AQ6ZSG2 479 aa21.44■■□□□ 1.02
UBXN1-217ENST00000534176 CCDC7Q96M83 1385 aa21.44■■□□□ 1.02
UBXN1-217ENST00000534176 CSB-PGBD3P0DP91 1061 aa21.43■■□□□ 1.02
UBXN1-217ENST00000534176 CARD10Q9BWT7 1032 aa21.43■■□□□ 1.02
UBXN1-217ENST00000534176 AXIN2Q9Y2T1 843 aa21.42■■□□□ 1.02
UBXN1-217ENST00000534176 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
UBXN1-217ENST00000534176 LTN1O94822 1766 aa21.39■■□□□ 1.01
UBXN1-217ENST00000534176 ERBB3P21860 1342 aa21.39■■□□□ 1.01
UBXN1-217ENST00000534176 BAG6P46379 1132 aa21.39■■□□□ 1.01
UBXN1-217ENST00000534176 ZRANB1Q9UGI0 708 aa21.39■■□□□ 1.01
UBXN1-217ENST00000534176 RGPD1P0DJD0 1748 aa21.38■■□□□ 1.01
UBXN1-217ENST00000534176 RTL1A6NKG5 1358 aa21.38■■□□□ 1.01
UBXN1-217ENST00000534176 FYB1O15117 783 aa21.38■■□□□ 1.01
UBXN1-217ENST00000534176 HSPA5P11021 654 aaKnown RBP21.38■■□□□ 1.01
UBXN1-217ENST00000534176 IP6K1Q92551 441 aa21.38■■□□□ 1.01
UBXN1-217ENST00000534176 MYOM1P52179 1685 aa21.37■■□□□ 1.01
UBXN1-217ENST00000534176 KIF24Q5T7B8 1368 aa21.37■■□□□ 1.01
UBXN1-217ENST00000534176 DDB1Q16531 1140 aa21.37■■□□□ 1.01
UBXN1-217ENST00000534176 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
UBXN1-217ENST00000534176 FAM208AQ9UK61 1670 aaKnown RBP21.35■■□□□ 1.01
UBXN1-217ENST00000534176 DISP2A7MBM2 1401 aa21.35■■□□□ 1.01
UBXN1-217ENST00000534176 RGPD5Q99666 1765 aa21.34■■□□□ 1.01
UBXN1-217ENST00000534176 AMPHP49418 695 aa21.34■■□□□ 1.01
UBXN1-217ENST00000534176 OVOS2A0A0G2JMS6 1433 aa21.34■■□□□ 1.01
UBXN1-217ENST00000534176 KIF20BQ96Q89 1820 aa21.34■■□□□ 1.01
UBXN1-217ENST00000534176 NSD3Q9BZ95 1437 aa21.33■■□□□ 1.01
UBXN1-217ENST00000534176 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
UBXN1-217ENST00000534176 PARD3Q8TEW0 1356 aa21.33■■□□□ 1
UBXN1-217ENST00000534176 WNK3Q9BYP7 1800 aa21.32■■□□□ 1
UBXN1-217ENST00000534176 MAP3K19Q56UN5 1328 aa21.31■■□□□ 1
UBXN1-217ENST00000534176 BCL9O00512 1426 aa21.31■■□□□ 1
UBXN1-217ENST00000534176 SMG6Q86US8 1419 aaKnown RBP21.31■■□□□ 1
UBXN1-217ENST00000534176 EXOC5O00471 708 aa21.31■■□□□ 1
UBXN1-217ENST00000534176 GGNBP2Q9H3C7 697 aa21.31■■□□□ 1
UBXN1-217ENST00000534176 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
UBXN1-217ENST00000534176 LRRC37A3O60309 1634 aa21.29■■□□□ 1
UBXN1-217ENST00000534176 HOXC9P31274 260 aa21.29■■□□□ 1
UBXN1-217ENST00000534176 CARD14Q9BXL6 1004 aa21.29■■□□□ 1
UBXN1-217ENST00000534176 NSD2O96028 1365 aa21.28■■□□□ 1
UBXN1-217ENST00000534176 IL2RBP14784 551 aa21.28■■□□□ 1
UBXN1-217ENST00000534176 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
UBXN1-217ENST00000534176 TNS2Q63HR2 1409 aa21.27■■□□□ 1
UBXN1-217ENST00000534176 FLT4P35916 1363 aa21.26■□□□□ 0.99
UBXN1-217ENST00000534176 FAM182BQ5T319 152 aa21.26■□□□□ 0.99
UBXN1-217ENST00000534176 DEFB132Q7Z7B7 95 aa21.26■□□□□ 0.99
UBXN1-217ENST00000534176 TRIM37O94972 964 aa21.25■□□□□ 0.99
UBXN1-217ENST00000534176 TNS1Q9HBL0 1735 aaKnown RBP21.25■□□□□ 0.99
UBXN1-217ENST00000534176 INSRP06213 1382 aa21.24■□□□□ 0.99
UBXN1-217ENST00000534176 APBA3O96018 575 aa21.23■□□□□ 0.99
UBXN1-217ENST00000534176 PEAK1Q9H792 1746 aa21.23■□□□□ 0.99
UBXN1-217ENST00000534176 RRS1Q15050 365 aaKnown RBP21.22■□□□□ 0.99
UBXN1-217ENST00000534176 BCL11BQ9C0K0 894 aaPredicted RBP21.21■□□□□ 0.99
UBXN1-217ENST00000534176 PANK3Q9H999 370 aa21.21■□□□□ 0.99
UBXN1-217ENST00000534176 EN1Q05925 392 aaPredicted RBP21.2■□□□□ 0.98
UBXN1-217ENST00000534176 MARCH10Q8NA82 808 aaPredicted RBP21.2■□□□□ 0.98
UBXN1-217ENST00000534176 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
UBXN1-217ENST00000534176 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
UBXN1-217ENST00000534176 PLSCR1O15162 318 aa21.19■□□□□ 0.98
UBXN1-217ENST00000534176 LTV1Q96GA3 475 aaPredicted RBP21.19■□□□□ 0.98
UBXN1-217ENST00000534176 RGPD3A6NKT7 1758 aaPredicted RBP21.18■□□□□ 0.98
UBXN1-217ENST00000534176 RGPD4Q7Z3J3 1758 aa21.18■□□□□ 0.98
UBXN1-217ENST00000534176 CAMKK2Q96RR4 588 aa21.18■□□□□ 0.98
UBXN1-217ENST00000534176 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
UBXN1-217ENST00000534176 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
UBXN1-217ENST00000534176 SBF2Q86WG5 1849 aa21.15■□□□□ 0.98
UBXN1-217ENST00000534176 FBLN1P23142 703 aa21.15■□□□□ 0.98
UBXN1-217ENST00000534176 RAPGEF4Q8WZA2 1011 aa21.15■□□□□ 0.98
UBXN1-217ENST00000534176 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
UBXN1-217ENST00000534176 HSP90AB2PQ58FF8 381 aa21.14■□□□□ 0.97
UBXN1-217ENST00000534176 NBPF14Q5TI25 921 aa21.14■□□□□ 0.97
UBXN1-217ENST00000534176 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
UBXN1-217ENST00000534176 EMILIN1Q9Y6C2 1016 aa21.12■□□□□ 0.97
UBXN1-217ENST00000534176 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
UBXN1-217ENST00000534176 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
UBXN1-217ENST00000534176 TATP17735 454 aaPredicted RBP21.11■□□□□ 0.97
UBXN1-217ENST00000534176 NBPF6Q5VWK0 638 aa21.11■□□□□ 0.97
UBXN1-217ENST00000534176 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
UBXN1-217ENST00000534176 ZCRB1Q8TBF4 217 aaKnown RBP21.11■□□□□ 0.97
UBXN1-217ENST00000534176 NBPF4Q96M43 638 aa21.11■□□□□ 0.97
UBXN1-217ENST00000534176 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
UBXN1-217ENST00000534176 RREB1Q92766 1687 aa21.1■□□□□ 0.97
UBXN1-217ENST00000534176 NHSQ6T4R5 1651 aa21.09■□□□□ 0.97
UBXN1-217ENST00000534176 HMGB2P26583 209 aaKnown RBP21.09■□□□□ 0.97
UBXN1-217ENST00000534176 NCAPD2Q15021 1401 aa21.07■□□□□ 0.96
UBXN1-217ENST00000534176 DDX54Q8TDD1 881 aaKnown RBP21.07■□□□□ 0.96
UBXN1-217ENST00000534176 PCDH11XQ9BZA7 1347 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms