RNA–Protein interactions for RNA: ENST00000533717.5

PSMD13-213, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2

Gene PSMD13, Length 670 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-213ENST00000533717 FAM98CQ17RN3 349 aaKnown RBP21.59■■□□□ 1.05
PSMD13-213ENST00000533717 COG3Q96JB2 828 aa21.59■■□□□ 1.05
PSMD13-213ENST00000533717 LARP1Q6PKG0 1096 aaKnown RBP21.58■■□□□ 1.05
PSMD13-213ENST00000533717 CARD14Q9BXL6 1004 aa21.58■■□□□ 1.05
PSMD13-213ENST00000533717 CRB1P82279 1406 aa21.57■■□□□ 1.04
PSMD13-213ENST00000533717 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
PSMD13-213ENST00000533717 FYB1O15117 783 aa21.57■■□□□ 1.04
PSMD13-213ENST00000533717 UPF1Q92900 1129 aaKnown RBP eCLIP21.57■■□□□ 1.04
PSMD13-213ENST00000533717 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
PSMD13-213ENST00000533717 WNK3Q9BYP7 1800 aa21.57■■□□□ 1.04
PSMD13-213ENST00000533717 A0A0G2JS52 829 aa21.56■■□□□ 1.04
PSMD13-213ENST00000533717 C11orf95C9JLR9 678 aaPredicted RBP21.56■■□□□ 1.04
PSMD13-213ENST00000533717 MYT1Q01538 1121 aa21.56■■□□□ 1.04
PSMD13-213ENST00000533717 ANKRD26Q9UPS8 1709 aa21.55■■□□□ 1.04
PSMD13-213ENST00000533717 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
PSMD13-213ENST00000533717 GGNBP2Q9H3C7 697 aa21.54■■□□□ 1.04
PSMD13-213ENST00000533717 WDR17Q8IZU2 1322 aa21.54■■□□□ 1.04
PSMD13-213ENST00000533717 PARP4Q9UKK3 1724 aaKnown RBP21.53■■□□□ 1.04
PSMD13-213ENST00000533717 BARGINQ6ZT62 677 aa21.53■■□□□ 1.04
PSMD13-213ENST00000533717 THRAP3Q9Y2W1 955 aaKnown RBP21.53■■□□□ 1.04
PSMD13-213ENST00000533717 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
PSMD13-213ENST00000533717 FAM208AQ9UK61 1670 aaKnown RBP21.51■■□□□ 1.03
PSMD13-213ENST00000533717 TOM1L2Q6ZVM7 507 aa21.51■■□□□ 1.03
PSMD13-213ENST00000533717 KRT27Q7Z3Y8 459 aa21.51■■□□□ 1.03
PSMD13-213ENST00000533717 CGNL1Q0VF96 1302 aa21.5■■□□□ 1.03
PSMD13-213ENST00000533717 BLMP54132 1417 aaPredicted RBP21.49■■□□□ 1.03
PSMD13-213ENST00000533717 CSB-PGBD3P0DP91 1061 aa21.49■■□□□ 1.03
PSMD13-213ENST00000533717 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
PSMD13-213ENST00000533717 MAP2P11137 1827 aaKnown RBP21.49■■□□□ 1.03
PSMD13-213ENST00000533717 KIF7Q2M1P5 1343 aa21.49■■□□□ 1.03
PSMD13-213ENST00000533717 PANK3Q9H999 370 aa21.48■■□□□ 1.03
PSMD13-213ENST00000533717 MAP3K19Q56UN5 1328 aa21.48■■□□□ 1.03
PSMD13-213ENST00000533717 FBLN1P23142 703 aa21.47■■□□□ 1.03
PSMD13-213ENST00000533717 IP6K1Q92551 441 aa21.47■■□□□ 1.03
PSMD13-213ENST00000533717 ERBB3P21860 1342 aa21.47■■□□□ 1.03
PSMD13-213ENST00000533717 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
PSMD13-213ENST00000533717 LRRC37A3O60309 1634 aa21.46■■□□□ 1.03
PSMD13-213ENST00000533717 EP400Q96L91 3159 aa21.46■■□□□ 1.03
PSMD13-213ENST00000533717 RGPD2P0DJD1 1756 aa21.45■■□□□ 1.02
PSMD13-213ENST00000533717 RTL1A6NKG5 1358 aa21.45■■□□□ 1.02
PSMD13-213ENST00000533717 PEAK1Q9H792 1746 aa21.44■■□□□ 1.02
PSMD13-213ENST00000533717 AMPHP49418 695 aa21.44■■□□□ 1.02
PSMD13-213ENST00000533717 ANKRD24Q8TF21 1146 aa21.44■■□□□ 1.02
PSMD13-213ENST00000533717 CCDC7Q96M83 1385 aa21.44■■□□□ 1.02
PSMD13-213ENST00000533717 HOXC9P31274 260 aa21.43■■□□□ 1.02
PSMD13-213ENST00000533717 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
PSMD13-213ENST00000533717 CCDC125Q86Z20 511 aa21.43■■□□□ 1.02
PSMD13-213ENST00000533717 RGPD1P0DJD0 1748 aa21.43■■□□□ 1.02
PSMD13-213ENST00000533717 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
PSMD13-213ENST00000533717 DISP2A7MBM2 1401 aa21.4■■□□□ 1.02
PSMD13-213ENST00000533717 NSD2O96028 1365 aa21.4■■□□□ 1.02
PSMD13-213ENST00000533717 KIF24Q5T7B8 1368 aa21.4■■□□□ 1.02
PSMD13-213ENST00000533717 FAM182BQ5T319 152 aa21.4■■□□□ 1.02
PSMD13-213ENST00000533717 CDCA7Q9BWT1 371 aaPredicted RBP21.4■■□□□ 1.02
PSMD13-213ENST00000533717 NLRP2Q9NX02 1062 aa21.4■■□□□ 1.02
PSMD13-213ENST00000533717 WASHC2AQ641Q2 1341 aa21.38■■□□□ 1.01
PSMD13-213ENST00000533717 LTV1Q96GA3 475 aaPredicted RBP21.38■■□□□ 1.01
PSMD13-213ENST00000533717 KNSTRNQ9Y448 316 aa21.38■■□□□ 1.01
PSMD13-213ENST00000533717 TNS1Q9HBL0 1735 aaKnown RBP21.38■■□□□ 1.01
PSMD13-213ENST00000533717 FLT4P35916 1363 aa21.37■■□□□ 1.01
PSMD13-213ENST00000533717 SBF2Q86WG5 1849 aa21.37■■□□□ 1.01
PSMD13-213ENST00000533717 DDB1Q16531 1140 aa21.37■■□□□ 1.01
PSMD13-213ENST00000533717 FAM196AQ6ZSG2 479 aa21.36■■□□□ 1.01
PSMD13-213ENST00000533717 INSRP06213 1382 aa21.36■■□□□ 1.01
PSMD13-213ENST00000533717 EMILIN1Q9Y6C2 1016 aa21.35■■□□□ 1.01
PSMD13-213ENST00000533717 SMG6Q86US8 1419 aaKnown RBP21.35■■□□□ 1.01
PSMD13-213ENST00000533717 SF3B2Q13435 895 aaKnown RBP21.34■■□□□ 1.01
PSMD13-213ENST00000533717 HSP90AB2PQ58FF8 381 aa21.33■■□□□ 1.01
PSMD13-213ENST00000533717 OVOS2A0A0G2JMS6 1433 aa21.32■■□□□ 1
PSMD13-213ENST00000533717 TNS2Q63HR2 1409 aa21.32■■□□□ 1
PSMD13-213ENST00000533717 IL2RBP14784 551 aa21.32■■□□□ 1
PSMD13-213ENST00000533717 EXOC5O00471 708 aa21.31■■□□□ 1
PSMD13-213ENST00000533717 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
PSMD13-213ENST00000533717 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
PSMD13-213ENST00000533717 POLKQ9UBT6 870 aa21.31■■□□□ 1
PSMD13-213ENST00000533717 PER1O15534 1290 aaPredicted RBP21.3■■□□□ 1
PSMD13-213ENST00000533717 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
PSMD13-213ENST00000533717 MORC1Q86VD1 984 aa21.3■■□□□ 1
PSMD13-213ENST00000533717 SHANK3Q9BYB0 1731 aa21.27■■□□□ 1
PSMD13-213ENST00000533717 TRIM37O94972 964 aa21.27■■□□□ 1
PSMD13-213ENST00000533717 NBPF6Q5VWK0 638 aa21.27■■□□□ 1
PSMD13-213ENST00000533717 DEFB132Q7Z7B7 95 aa21.27■■□□□ 1
PSMD13-213ENST00000533717 MARCH10Q8NA82 808 aaPredicted RBP21.27■■□□□ 1
PSMD13-213ENST00000533717 NBPF4Q96M43 638 aa21.27■■□□□ 1
PSMD13-213ENST00000533717 BAG6P46379 1132 aa21.26■□□□□ 0.99
PSMD13-213ENST00000533717 BCL9O00512 1426 aa21.25■□□□□ 0.99
PSMD13-213ENST00000533717 MEGF6O75095 1541 aa21.24■□□□□ 0.99
PSMD13-213ENST00000533717 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
PSMD13-213ENST00000533717 USHBP1Q8N6Y0 703 aa21.23■□□□□ 0.99
PSMD13-213ENST00000533717 KAT6BQ8WYB5 2073 aa21.23■□□□□ 0.99
PSMD13-213ENST00000533717 NHSQ6T4R5 1651 aa21.22■□□□□ 0.99
PSMD13-213ENST00000533717 NCAPD2Q15021 1401 aa21.21■□□□□ 0.99
PSMD13-213ENST00000533717 RGPD3A6NKT7 1758 aaPredicted RBP21.21■□□□□ 0.99
PSMD13-213ENST00000533717 RGPD4Q7Z3J3 1758 aa21.21■□□□□ 0.99
PSMD13-213ENST00000533717 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
PSMD13-213ENST00000533717 APBA3O96018 575 aa21.2■□□□□ 0.98
PSMD13-213ENST00000533717 RAPGEF4Q8WZA2 1011 aa21.2■□□□□ 0.98
PSMD13-213ENST00000533717 RREB1Q92766 1687 aa21.2■□□□□ 0.98
PSMD13-213ENST00000533717 PKD1L3Q7Z443 1732 aa21.2■□□□□ 0.98
PSMD13-213ENST00000533717 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms