RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FYB1O15117 783 aa21.08■□□□□ 0.97
PHRF1-205ENST00000533464 RBM33Q96EV2 1170 aaKnown RBP21.08■□□□□ 0.97
PHRF1-205ENST00000533464 TBC1D2BQ9UPU7 963 aa21.08■□□□□ 0.97
PHRF1-205ENST00000533464 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.97
PHRF1-205ENST00000533464 POGZQ7Z3K3 1410 aa21.08■□□□□ 0.97
PHRF1-205ENST00000533464 K7ELQ4 463 aaPredicted RBP21.08■□□□□ 0.96
PHRF1-205ENST00000533464 MBD3O95983 291 aa21.08■□□□□ 0.96
PHRF1-205ENST00000533464 CCAR2Q8N163 923 aaKnown RBP21.08■□□□□ 0.96
PHRF1-205ENST00000533464 NOS1P29475 1434 aa21.08■□□□□ 0.96
PHRF1-205ENST00000533464 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.96
PHRF1-205ENST00000533464 PDCP20941 246 aa21.07■□□□□ 0.96
PHRF1-205ENST00000533464 NKTRP30414 1462 aaKnown RBP21.07■□□□□ 0.96
PHRF1-205ENST00000533464 ZC3H6P61129 1189 aaKnown RBP21.07■□□□□ 0.96
PHRF1-205ENST00000533464 MEX3CQ5U5Q3 659 aaKnown RBP21.07■□□□□ 0.96
PHRF1-205ENST00000533464 FAM43AQ8N2R8 423 aa21.07■□□□□ 0.96
PHRF1-205ENST00000533464 TRIM34Q9BYJ4 488 aa21.07■□□□□ 0.96
PHRF1-205ENST00000533464 SDF4Q9BRK5 362 aa21.06■□□□□ 0.96
PHRF1-205ENST00000533464 IFT57Q9NWB7 429 aa21.06■□□□□ 0.96
PHRF1-205ENST00000533464 PRDM11Q9NQV5 511 aa21.06■□□□□ 0.96
PHRF1-205ENST00000533464 ABCC11Q96J66 1382 aa21.05■□□□□ 0.96
PHRF1-205ENST00000533464 EXOC6BQ9Y2D4 811 aa21.05■□□□□ 0.96
PHRF1-205ENST00000533464 WASLO00401 505 aaPredicted RBP21.05■□□□□ 0.96
PHRF1-205ENST00000533464 FANCAO15360 1455 aa21.05■□□□□ 0.96
PHRF1-205ENST00000533464 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
PHRF1-205ENST00000533464 FIBPO43427 364 aa21.05■□□□□ 0.96
PHRF1-205ENST00000533464 TPM2P07951 284 aa21.05■□□□□ 0.96
PHRF1-205ENST00000533464 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
PHRF1-205ENST00000533464 DHX29Q7Z478 1369 aaKnown RBP21.05■□□□□ 0.96
PHRF1-205ENST00000533464 ALDH1L2Q3SY69 923 aa21.04■□□□□ 0.96
PHRF1-205ENST00000533464 CYP46A1Q9Y6A2 500 aa21.04■□□□□ 0.96
PHRF1-205ENST00000533464 CWC22Q9HCG8 908 aaKnown RBP21.04■□□□□ 0.96
PHRF1-205ENST00000533464 GOLGA6L1Q8N7Z2 621 aa21.03■□□□□ 0.96
PHRF1-205ENST00000533464 ANKRD20A12PQ8NF67 263 aa21.03■□□□□ 0.96
PHRF1-205ENST00000533464 FAM135AQ9P2D6 1515 aa21.03■□□□□ 0.96
PHRF1-205ENST00000533464 CCDC158Q5M9N0 1113 aa21.03■□□□□ 0.96
PHRF1-205ENST00000533464 AACSQ86V21 672 aa21.03■□□□□ 0.96
PHRF1-205ENST00000533464 CNNM1Q9NRU3 951 aa21.03■□□□□ 0.96
PHRF1-205ENST00000533464 KDM4AO75164 1064 aa21.03■□□□□ 0.96
PHRF1-205ENST00000533464 CCDC47Q96A33 483 aaKnown RBP21.03■□□□□ 0.96
PHRF1-205ENST00000533464 PDE4CQ08493 712 aa21.02■□□□□ 0.96
PHRF1-205ENST00000533464 KCNH5Q8NCM2 988 aa21.01■□□□□ 0.95
PHRF1-205ENST00000533464 HOMER1Q86YM7 354 aa21.01■□□□□ 0.95
PHRF1-205ENST00000533464 UGGT2Q9NYU1 1516 aa21.01■□□□□ 0.95
PHRF1-205ENST00000533464 PCMTD1Q96MG8 357 aaPredicted RBP21.01■□□□□ 0.95
PHRF1-205ENST00000533464 LRPPRCP42704 1394 aaKnown RBP21.01■□□□□ 0.95
PHRF1-205ENST00000533464 ATP10BO94823 1461 aa21■□□□□ 0.95
PHRF1-205ENST00000533464 TTC39AQ5SRH9 613 aa21■□□□□ 0.95
PHRF1-205ENST00000533464 SART3Q15020 963 aaKnown RBP21■□□□□ 0.95
PHRF1-205ENST00000533464 AMOTL2Q9Y2J4 779 aa21■□□□□ 0.95
PHRF1-205ENST00000533464 BRPF3Q9ULD4 1205 aa21■□□□□ 0.95
PHRF1-205ENST00000533464 IPO7O95373 1038 aaKnown RBP20.99■□□□□ 0.95
PHRF1-205ENST00000533464 TRIM27P14373 513 aa20.99■□□□□ 0.95
PHRF1-205ENST00000533464 CWC27Q6UX04 472 aaKnown RBP20.99■□□□□ 0.95
PHRF1-205ENST00000533464 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.99■□□□□ 0.95
PHRF1-205ENST00000533464 CEP89Q96ST8 783 aa20.99■□□□□ 0.95
PHRF1-205ENST00000533464 STK3Q13188 491 aa20.98■□□□□ 0.95
PHRF1-205ENST00000533464 ATP2B1P20020 1258 aa20.98■□□□□ 0.95
PHRF1-205ENST00000533464 CEBPAP49715 358 aaPredicted RBP20.98■□□□□ 0.95
PHRF1-205ENST00000533464 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
PHRF1-205ENST00000533464 USHBP1Q8N6Y0 703 aa20.98■□□□□ 0.95
PHRF1-205ENST00000533464 NUP153P49790 1475 aaKnown RBP20.98■□□□□ 0.95
PHRF1-205ENST00000533464 XBP1P17861 261 aa20.97■□□□□ 0.95
PHRF1-205ENST00000533464 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
PHRF1-205ENST00000533464 MTMR7Q9Y216 660 aa20.97■□□□□ 0.95
PHRF1-205ENST00000533464 CCDC57Q2TAC2 916 aa20.97■□□□□ 0.95
PHRF1-205ENST00000533464 RRP12Q5JTH9 1297 aaKnown RBP20.97■□□□□ 0.95
PHRF1-205ENST00000533464 FAM13BQ9NYF5 915 aa20.97■□□□□ 0.95
PHRF1-205ENST00000533464 SMARCA5O60264 1052 aaPredicted RBP20.97■□□□□ 0.95
PHRF1-205ENST00000533464 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
PHRF1-205ENST00000533464 DENND4BO75064 1496 aaPredicted RBP20.96■□□□□ 0.95
PHRF1-205ENST00000533464 KINO60870 393 aaKnown RBP20.96■□□□□ 0.95
PHRF1-205ENST00000533464 CEBPZQ03701 1054 aaKnown RBP20.96■□□□□ 0.95
PHRF1-205ENST00000533464 NAT10Q9H0A0 1025 aaKnown RBP20.96■□□□□ 0.95
PHRF1-205ENST00000533464 WDR33Q9C0J8 1336 aaKnown RBP20.96■□□□□ 0.95
PHRF1-205ENST00000533464 A0A0U1RQG5 324 aaPredicted RBP20.96■□□□□ 0.95
PHRF1-205ENST00000533464 F6X3S4 739 aa20.96■□□□□ 0.95
PHRF1-205ENST00000533464 LETM1O95202 739 aaPredicted RBP20.96■□□□□ 0.95
PHRF1-205ENST00000533464 MCM4P33991 863 aa20.96■□□□□ 0.95
PHRF1-205ENST00000533464 TSPY26PQ9H489 355 aa20.95■□□□□ 0.94
PHRF1-205ENST00000533464 BRMS1Q9HCU9 246 aa20.95■□□□□ 0.94
PHRF1-205ENST00000533464 ANKRD1Q15327 319 aa20.95■□□□□ 0.94
PHRF1-205ENST00000533464 CCDC39Q9UFE4 941 aa20.95■□□□□ 0.94
PHRF1-205ENST00000533464 CIZ1Q9ULV3 898 aaPredicted RBP20.95■□□□□ 0.94
PHRF1-205ENST00000533464 BLOC1S2Q6QNY1 142 aa20.94■□□□□ 0.94
PHRF1-205ENST00000533464 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.94■□□□□ 0.943e-7■■■□□ 16.9
PHRF1-205ENST00000533464 NSD2O96028 1365 aa20.94■□□□□ 0.94
PHRF1-205ENST00000533464 FKBP4Q02790 459 aaKnown RBP eCLIP20.94■□□□□ 0.943e-6■□□□□ 10.7
PHRF1-205ENST00000533464 CEP126Q9P2H0 1117 aa20.94■□□□□ 0.94
PHRF1-205ENST00000533464 PHF8Q9UPP1 1060 aa20.94■□□□□ 0.94
PHRF1-205ENST00000533464 FOXO3O43524 673 aa20.94■□□□□ 0.94
PHRF1-205ENST00000533464 TRIM5Q9C035 493 aa20.94■□□□□ 0.94
PHRF1-205ENST00000533464 MX1P20591 662 aa20.93■□□□□ 0.94
PHRF1-205ENST00000533464 JAKMIP1Q96N16 626 aaKnown RBP20.93■□□□□ 0.94
PHRF1-205ENST00000533464 KIF1BPQ96EK5 621 aa20.93■□□□□ 0.94
PHRF1-205ENST00000533464 RAPGEF6Q8TEU7 1601 aa20.92■□□□□ 0.94
PHRF1-205ENST00000533464 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
PHRF1-205ENST00000533464 OLFM4Q6UX06 510 aa20.92■□□□□ 0.94
PHRF1-205ENST00000533464 FBLN1P23142 703 aa20.92■□□□□ 0.94
PHRF1-205ENST00000533464 KDM5BQ9UGL1 1544 aa20.92■□□□□ 0.94
PHRF1-205ENST00000533464 AEBP1Q8IUX7 1158 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms