RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 TSPOAP1O95153 1857 aa8.75□□□□□ -1.01
MACF1-229ENST00000530262 NCKAP5LQ9HCH0 1330 aa8.75□□□□□ -1.01
MACF1-229ENST00000530262 DHX16O60231 1041 aaKnown RBP8.75□□□□□ -1.01
MACF1-229ENST00000530262 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
MACF1-229ENST00000530262 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
MACF1-229ENST00000530262 ADAMTS8Q9UP79 889 aa8.75□□□□□ -1.01
MACF1-229ENST00000530262 MNS1Q8NEH6 495 aa8.74□□□□□ -1.01
MACF1-229ENST00000530262 SMG6Q86US8 1419 aaKnown RBP8.74□□□□□ -1.01
MACF1-229ENST00000530262 RABEP1Q15276 862 aa8.74□□□□□ -1.01
MACF1-229ENST00000530262 IFT57Q9NWB7 429 aa8.74□□□□□ -1.01
MACF1-229ENST00000530262 CCP110O43303 1012 aa8.74□□□□□ -1.01
MACF1-229ENST00000530262 NASPP49321 788 aaPredicted RBP8.74□□□□□ -1.01
MACF1-229ENST00000530262 RUFY1Q96T51 708 aa8.74□□□□□ -1.01
MACF1-229ENST00000530262 DHX8Q14562 1220 aaKnown RBP8.73□□□□□ -1.01
MACF1-229ENST00000530262 ABCC10Q5T3U5 1492 aa8.73□□□□□ -1.01
MACF1-229ENST00000530262 PDCP20941 246 aa8.73□□□□□ -1.01
MACF1-229ENST00000530262 MAP7D2Q96T17 732 aa8.73□□□□□ -1.01
MACF1-229ENST00000530262 DUOX2Q9NRD8 1548 aa8.73□□□□□ -1.01
MACF1-229ENST00000530262 WASHC4Q2M389 1173 aa8.73□□□□□ -1.01
MACF1-229ENST00000530262 CLASRPQ8N2M8 674 aaKnown RBP8.73□□□□□ -1.01
MACF1-229ENST00000530262 WDR97A6NE52 1622 aa8.73□□□□□ -1.01
MACF1-229ENST00000530262 RAD21O60216 631 aa8.72□□□□□ -1.01
MACF1-229ENST00000530262 TCP11L2Q8N4U5 519 aa8.72□□□□□ -1.01
MACF1-229ENST00000530262 NEUROD6Q96NK8 337 aa8.72□□□□□ -1.01
MACF1-229ENST00000530262 FSD1Q9BTV5 496 aa8.72□□□□□ -1.01
MACF1-229ENST00000530262 SART3Q15020 963 aaKnown RBP8.72□□□□□ -1.01
MACF1-229ENST00000530262 CCDC43Q96MW1 224 aaKnown RBP8.72□□□□□ -1.01
MACF1-229ENST00000530262 TSPY26PQ9H489 355 aa8.72□□□□□ -1.01
MACF1-229ENST00000530262 CWC22Q9HCG8 908 aaKnown RBP8.72□□□□□ -1.01
MACF1-229ENST00000530262 NOM1Q5C9Z4 860 aaKnown RBP8.72□□□□□ -1.01
MACF1-229ENST00000530262 ZNF692Q9BU19 519 aaPredicted RBP8.72□□□□□ -1.01
MACF1-229ENST00000530262 FAM13BQ9NYF5 915 aa8.72□□□□□ -1.01
MACF1-229ENST00000530262 ERCC4Q92889 916 aaPredicted RBP8.72□□□□□ -1.01
MACF1-229ENST00000530262 ZNF396Q96N95 335 aaPredicted RBP8.72□□□□□ -1.01
MACF1-229ENST00000530262 TBC1D2BQ9UPU7 963 aa8.72□□□□□ -1.01
MACF1-229ENST00000530262 ZNF428Q96B54 188 aa8.71□□□□□ -1.01
MACF1-229ENST00000530262 RBM42Q9BTD8 480 aaKnown RBP8.71□□□□□ -1.01
MACF1-229ENST00000530262 DMRT2Q9Y5R5 561 aa8.71□□□□□ -1.01
MACF1-229ENST00000530262 TRAK2O60296 914 aa8.71□□□□□ -1.01
MACF1-229ENST00000530262 AIMP1Q12904 312 aaKnown RBP8.71□□□□□ -1.01
MACF1-229ENST00000530262 PLEKHO1Q53GL0 409 aaPredicted RBP8.71□□□□□ -1.01
MACF1-229ENST00000530262 CCDC61Q9Y6R9 512 aa8.71□□□□□ -1.01
MACF1-229ENST00000530262 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.01
MACF1-229ENST00000530262 CCDC173Q0VFZ6 552 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 WDR63Q8IWG1 891 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 PDZRN3Q9UPQ7 1066 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 ZMYM3Q14202 1370 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 PRKAR2BP31323 418 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 UBAP1LF5GYI3 381 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 GNAI2P04899 355 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 HSP90B2PQ58FF3 399 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 SULT6B1Q6IMI4 303 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 VSIG10Q8N0Z9 540 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 UHRF1BP1LA0JNW5 1464 aa8.71□□□□□ -1.02
MACF1-229ENST00000530262 AEBP1Q8IUX7 1158 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 CCT4P50991 539 aaKnown RBP8.7□□□□□ -1.02
MACF1-229ENST00000530262 PNISRQ8TF01 805 aaKnown RBP8.7□□□□□ -1.02
MACF1-229ENST00000530262 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 PIP4K2AP48426 406 aaPredicted RBP8.7□□□□□ -1.02
MACF1-229ENST00000530262 TWISTNBQ3B726 338 aaPredicted RBP8.7□□□□□ -1.02
MACF1-229ENST00000530262 CFAP43Q8NDM7 1665 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 FOSBP53539 338 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 NAP1L1P55209 391 aaKnown RBP8.7□□□□□ -1.02
MACF1-229ENST00000530262 FBXW7Q969H0 707 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 FAM177BA6PVY3 158 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 SLC3A2P08195 630 aaKnown RBP8.7□□□□□ -1.02
MACF1-229ENST00000530262 EPS15P42566 896 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 ANKRD1Q15327 319 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 SDF4Q9BRK5 362 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 MYO6Q9UM54 1294 aa8.7□□□□□ -1.02
MACF1-229ENST00000530262 KINO60870 393 aaKnown RBP8.69□□□□□ -1.02
MACF1-229ENST00000530262 EXOSC9Q06265 439 aaKnown RBP8.69□□□□□ -1.02
MACF1-229ENST00000530262 KIF6Q6ZMV9 814 aa8.69□□□□□ -1.02
MACF1-229ENST00000530262 NME9Q86XW9 330 aa8.69□□□□□ -1.02
MACF1-229ENST00000530262 SMARCE1Q969G3 411 aa8.69□□□□□ -1.02
MACF1-229ENST00000530262 SURF6O75683 361 aaKnown RBP8.69□□□□□ -1.02
MACF1-229ENST00000530262 TATP17735 454 aaPredicted RBP8.69□□□□□ -1.02
MACF1-229ENST00000530262 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
MACF1-229ENST00000530262 NSD3Q9BZ95 1437 aa8.69□□□□□ -1.02
MACF1-229ENST00000530262 FILIP1LQ4L180 1135 aa8.69□□□□□ -1.02
MACF1-229ENST00000530262 USHBP1Q8N6Y0 703 aa8.69□□□□□ -1.02
MACF1-229ENST00000530262 NOB1Q9ULX3 412 aaKnown RBP8.69□□□□□ -1.02
MACF1-229ENST00000530262 WASLO00401 505 aaPredicted RBP8.68□□□□□ -1.02
MACF1-229ENST00000530262 CCDC27Q2M243 656 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
MACF1-229ENST00000530262 SAMD9Q5K651 1589 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 PDILTQ8N807 584 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 RIMS2Q9UQ26 1411 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 CT47A1Q5JQC4 288 aaPredicted RBP8.68□□□□□ -1.02
MACF1-229ENST00000530262 SRCIN1Q9C0H9 1055 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 TXLNAP40222 546 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 NEK4P51957 841 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 CAVIN1Q6NZI2 390 aaKnown RBP8.68□□□□□ -1.02
MACF1-229ENST00000530262 CWC15Q9P013 229 aaKnown RBP8.68□□□□□ -1.02
MACF1-229ENST00000530262 TRIM5Q9C035 493 aa8.68□□□□□ -1.02
MACF1-229ENST00000530262 RDXP35241 583 aaKnown RBP8.67□□□□□ -1.02
MACF1-229ENST00000530262 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
MACF1-229ENST00000530262 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.023e-7■■■■□ 20
MACF1-229ENST00000530262 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
MACF1-229ENST00000530262 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms