RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 RGPD2P0DJD1 1756 aa7.79□□□□□ -1.16
RPUSD4-204ENST00000530036 SMG6Q86US8 1419 aaKnown RBP7.79□□□□□ -1.16
RPUSD4-204ENST00000530036 CHRNA2Q15822 529 aa7.79□□□□□ -1.16
RPUSD4-204ENST00000530036 AMER1Q5JTC6 1135 aaPredicted RBP7.79□□□□□ -1.16
RPUSD4-204ENST00000530036 UNC5CLQ8IV45 518 aa7.79□□□□□ -1.16
RPUSD4-204ENST00000530036 USP21Q9UK80 565 aa7.79□□□□□ -1.16
RPUSD4-204ENST00000530036 BLMP54132 1417 aaPredicted RBP7.78□□□□□ -1.16
RPUSD4-204ENST00000530036 BRWD3Q6RI45 1802 aa7.78□□□□□ -1.16
RPUSD4-204ENST00000530036 BTG4Q9NY30 223 aa7.78□□□□□ -1.16
RPUSD4-204ENST00000530036 KNSTRNQ9Y448 316 aa7.78□□□□□ -1.16
RPUSD4-204ENST00000530036 KIF24Q5T7B8 1368 aa7.78□□□□□ -1.16
RPUSD4-204ENST00000530036 PARP4Q9UKK3 1724 aaKnown RBP7.78□□□□□ -1.16
RPUSD4-204ENST00000530036 EP400Q96L91 3159 aa7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 SOX12O15370 315 aa7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 VPS72Q15906 364 aa7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 TRPC5Q9UL62 973 aaPredicted RBP7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 SRCAPQ6ZRS2 3230 aa7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 RGS12O14924 1447 aa7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 CRB1P82279 1406 aa7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 MAP3K19Q56UN5 1328 aa7.77□□□□□ -1.17
RPUSD4-204ENST00000530036 FLT4P35916 1363 aa7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 QTRT2Q9H974 415 aaKnown RBP7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 AXIN2Q9Y2T1 843 aa7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 LRRC37A3O60309 1634 aa7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 ERBB3P21860 1342 aa7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 SPATA31A5Q5VU36 1347 aa7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 SPATA31A7Q8IWB4 1347 aa7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 WDR17Q8IZU2 1322 aa7.76□□□□□ -1.17
RPUSD4-204ENST00000530036 RGPD1P0DJD0 1748 aa7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 FBLN1P23142 703 aa7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 HOXC9P31274 260 aa7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 RBM6P78332 1123 aaKnown RBP7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 RRS1Q15050 365 aaKnown RBP7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 IFFO2Q5TF58 517 aa7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 IP6K1Q92551 441 aa7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 GJD4Q96KN9 370 aaPredicted RBP7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 SPATA31A1Q5TZJ5 1347 aa7.75□□□□□ -1.17
RPUSD4-204ENST00000530036 INSRP06213 1382 aa7.74□□□□□ -1.17
RPUSD4-204ENST00000530036 ZBTB7CA1YPR0 619 aa7.74□□□□□ -1.17
RPUSD4-204ENST00000530036 LARP1Q6PKG0 1096 aaKnown RBP7.74□□□□□ -1.17
RPUSD4-204ENST00000530036 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
RPUSD4-204ENST00000530036 DISP2A7MBM2 1401 aa7.74□□□□□ -1.17
RPUSD4-204ENST00000530036 NCAPD2Q15021 1401 aa7.74□□□□□ -1.17
RPUSD4-204ENST00000530036 SHANK3Q9BYB0 1731 aa7.74□□□□□ -1.17
RPUSD4-204ENST00000530036 PARD3Q8TEW0 1356 aa7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 ZNF316A6NFI3 1004 aaPredicted RBP7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 ONECUT3O60422 494 aaPredicted RBP7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 RXRBP28702 533 aa7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 MORC1Q86VD1 984 aa7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 STRN4Q9NRL3 753 aa7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 POLKQ9UBT6 870 aa7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 COL3A1P02461 1466 aaPredicted RBP7.73□□□□□ -1.17
RPUSD4-204ENST00000530036 PKD1L3Q7Z443 1732 aa7.72□□□□□ -1.17
RPUSD4-204ENST00000530036 AMPHP49418 695 aa7.72□□□□□ -1.17
RPUSD4-204ENST00000530036 DDX10Q13206 875 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-204ENST00000530036 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
RPUSD4-204ENST00000530036 CC2D1BQ5T0F9 858 aaKnown RBP7.72□□□□□ -1.17
RPUSD4-204ENST00000530036 BARGINQ6ZT62 677 aa7.72□□□□□ -1.17
RPUSD4-204ENST00000530036 ANKRD24Q8TF21 1146 aa7.72□□□□□ -1.17
RPUSD4-204ENST00000530036 TNNT2P45379 298 aaPredicted RBP7.71□□□□□ -1.18
RPUSD4-204ENST00000530036 EVA1CP58658 441 aa7.71□□□□□ -1.18
RPUSD4-204ENST00000530036 TCP11L2Q8N4U5 519 aa7.71□□□□□ -1.18
RPUSD4-204ENST00000530036 CARD10Q9BWT7 1032 aa7.71□□□□□ -1.18
RPUSD4-204ENST00000530036 THRAP3Q9Y2W1 955 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-204ENST00000530036 CCDC9Q9Y3X0 531 aaKnown RBP7.71□□□□□ -1.18
RPUSD4-204ENST00000530036 SBF2Q86WG5 1849 aa7.71□□□□□ -1.18
RPUSD4-204ENST00000530036 TNS2Q63HR2 1409 aa7.7□□□□□ -1.18
RPUSD4-204ENST00000530036 MEGF6O75095 1541 aa7.7□□□□□ -1.18
RPUSD4-204ENST00000530036 FAM98CQ17RN3 349 aaKnown RBP7.7□□□□□ -1.18
RPUSD4-204ENST00000530036 TOM1L2Q6ZVM7 507 aa7.7□□□□□ -1.18
RPUSD4-204ENST00000530036 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
RPUSD4-204ENST00000530036 USP35Q9P2H5 1018 aa7.69□□□□□ -1.18
RPUSD4-204ENST00000530036 PLEKHG2Q9H7P9 1386 aa7.69□□□□□ -1.18
RPUSD4-204ENST00000530036 TNS1Q9HBL0 1735 aaKnown RBP7.69□□□□□ -1.18
RPUSD4-204ENST00000530036 OVOS2A0A0G2JMS6 1433 aa7.69□□□□□ -1.18
RPUSD4-204ENST00000530036 PPM1GO15355 546 aaPredicted RBP7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 MTHFSP49914 203 aa7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 EIF4A2Q14240 407 aaKnown RBP7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 NBPF6Q5VWK0 638 aa7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 SEPT12Q8IYM1 358 aa7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 LTV1Q96GA3 475 aaPredicted RBP7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 NBPF4Q96M43 638 aa7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 CDCA7Q9BWT1 371 aaPredicted RBP7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 NLRP2Q9NX02 1062 aa7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 IGSF1Q8N6C5 1336 aa7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 KDRP35968 1356 aa7.68□□□□□ -1.18
RPUSD4-204ENST00000530036 VIRMAQ69YN4 1812 aaKnown RBP7.67□□□□□ -1.18
RPUSD4-204ENST00000530036 PPP2R1AP30153 589 aa7.67□□□□□ -1.18
RPUSD4-204ENST00000530036 NHSQ6T4R5 1651 aa7.67□□□□□ -1.18
RPUSD4-204ENST00000530036 DOT1LQ8TEK3 1739 aa7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 IL2RBP14784 551 aa7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 IL13P35225 146 aa7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 CNGB1Q14028 1251 aaPredicted RBP7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 RALBP1Q15311 655 aa7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 EYA1Q99502 592 aa7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 PRKRIP1Q9H875 184 aaPredicted RBP7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 BCL9O00512 1426 aa7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 TOGARAM1Q9Y4F4 1720 aa7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 RGPD3A6NKT7 1758 aaPredicted RBP7.66□□□□□ -1.18
RPUSD4-204ENST00000530036 RGPD4Q7Z3J3 1758 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms