RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 CGNL1Q0VF96 1302 aa15.51■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 LARP1Q6PKG0 1096 aaKnown RBP15.51■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 SEPT12Q8IYM1 358 aa15.51■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 GGNBP2Q9H3C7 697 aa15.51■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 THRAP3Q9Y2W1 955 aaKnown RBP15.51■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 BARGINQ6ZT62 677 aa15.5■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 PANK3Q9H999 370 aa15.5■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 EP400Q96L91 3159 aa15.49■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 WDR17Q8IZU2 1322 aa15.49■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 TCP11L2Q8N4U5 519 aa15.49■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 CRB1P82279 1406 aa15.49■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 TOM1L2Q6ZVM7 507 aa15.47■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 IP6K1Q92551 441 aa15.47■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 UPF1Q92900 1129 aaKnown RBP eCLIP15.47■□□□□ 0.071e-7■■■□□ 15.9
TMX2-CTNND1-201ENST00000528395 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 BLMP54132 1417 aaPredicted RBP15.46■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 A0A0G2JS52 829 aa15.46■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 MYT1Q01538 1121 aa15.46■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 KRT27Q7Z3Y8 459 aa15.46■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 LTN1O94822 1766 aa15.46■□□□□ 0.07
TMX2-CTNND1-201ENST00000528395 MAP3K19Q56UN5 1328 aa15.45■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 CSB-PGBD3P0DP91 1061 aa15.45■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 CARD10Q9BWT7 1032 aa15.45■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 CCDC7Q96M83 1385 aa15.45■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 ERBB3P21860 1342 aa15.44■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 AMPHP49418 695 aa15.44■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 CDCA7Q9BWT1 371 aaPredicted RBP15.44■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 RTL1A6NKG5 1358 aa15.44■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 NSD2O96028 1365 aa15.44■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 RGPD5Q99666 1765 aa15.44■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 HOXC9P31274 260 aa15.43■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 CCDC125Q86Z20 511 aa15.43■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 KNSTRNQ9Y448 316 aa15.43■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 BRWD3Q6RI45 1802 aa15.43■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 WASHC2AQ641Q2 1341 aa15.43■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 FBLN1P23142 703 aa15.42■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 ANKRD24Q8TF21 1146 aa15.42■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 PDE3BQ13370 1112 aa15.4■□□□□ 0.06
TMX2-CTNND1-201ENST00000528395 FLT4P35916 1363 aa15.39■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 PER1O15534 1290 aaPredicted RBP15.39■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 NLRP2Q9NX02 1062 aa15.39■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 INSRP06213 1382 aa15.38■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 ANKRD26Q9UPS8 1709 aa15.38■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 DISP2A7MBM2 1401 aa15.37■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 DDB1Q16531 1140 aa15.37■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 FAM196AQ6ZSG2 479 aa15.37■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 FAM208AQ9UK61 1670 aaKnown RBP15.37■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 SMG6Q86US8 1419 aaKnown RBP15.36■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 HSP90AB2PQ58FF8 381 aa15.36■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 LTV1Q96GA3 475 aaPredicted RBP15.36■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 POLKQ9UBT6 870 aa15.36■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 EXOC5O00471 708 aa15.35■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 IL2RBP14784 551 aa15.35■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 NPC1L1Q9UHC9 1359 aa15.35■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 MAP2P11137 1827 aaKnown RBP15.34■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.05
TMX2-CTNND1-201ENST00000528395 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 TNNT2P45379 298 aaPredicted RBP15.33■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 PEAK1Q9H792 1746 aa15.33■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 NBPF6Q5VWK0 638 aa15.32■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 NBPF4Q96M43 638 aa15.32■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 LRRC37A3O60309 1634 aa15.32■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 BCL9O00512 1426 aa15.31■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 TNS2Q63HR2 1409 aa15.3■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 MARCH10Q8NA82 808 aaPredicted RBP15.29■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 BAG6P46379 1132 aa15.28■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 TRIM37O94972 964 aa15.27■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
TMX2-CTNND1-201ENST00000528395 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 RGPD2P0DJD1 1756 aa15.26■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 RGPD1P0DJD0 1748 aa15.26■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 ZCRB1Q8TBF4 217 aaKnown RBP15.26■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 EYA1Q99502 592 aa15.26■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 MTHFSP49914 203 aa15.24■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 MEGF6O75095 1541 aa15.23■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 APBA3O96018 575 aa15.22■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 DDX54Q8TDD1 881 aaKnown RBP15.22■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.03
TMX2-CTNND1-201ENST00000528395 TNS1Q9HBL0 1735 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms