RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SAMD9Q5K651 1589 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 TRDNQ13061 729 aa8.66□□□□□ -1.02
CTNND1-218ENST00000528232 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-218ENST00000528232 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-218ENST00000528232 NEFHP12036 1026 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 DHX8Q14562 1220 aaKnown RBP8.65□□□□□ -1.02
CTNND1-218ENST00000528232 CCDC191Q8NCU4 936 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 AK7Q96M32 723 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 ASXL1Q8IXJ9 1541 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 SURF6O75683 361 aaKnown RBP8.65□□□□□ -1.02
CTNND1-218ENST00000528232 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
CTNND1-218ENST00000528232 ALDH1L2Q3SY69 923 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 AMOTL1Q8IY63 956 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 CALCOCO1Q9P1Z2 691 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 BECN2A8MW95 431 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 CPLX1O14810 134 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 CHD1LQ86WJ1 897 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 ERCC4Q92889 916 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-218ENST00000528232 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
CTNND1-218ENST00000528232 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
CTNND1-218ENST00000528232 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-218ENST00000528232 HDGFL1Q5TGJ6 251 aa8.65□□□□□ -1.03
CTNND1-218ENST00000528232 PROSER2Q86WR7 435 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-218ENST00000528232 NOL10Q9BSC4 688 aaKnown RBP8.65□□□□□ -1.03
CTNND1-218ENST00000528232 IFT57Q9NWB7 429 aa8.65□□□□□ -1.03
CTNND1-218ENST00000528232 RRS1Q15050 365 aaKnown RBP8.64□□□□□ -1.03
CTNND1-218ENST00000528232 LRRCC1Q9C099 1032 aa8.64□□□□□ -1.03
CTNND1-218ENST00000528232 VPS37CA5D8V6 355 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-218ENST00000528232 LEKR1Q6ZMV7 388 aa8.64□□□□□ -1.03
CTNND1-218ENST00000528232 ANKLE2Q86XL3 938 aa8.64□□□□□ -1.03
CTNND1-218ENST00000528232 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
CTNND1-218ENST00000528232 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
CTNND1-218ENST00000528232 LRPPRCP42704 1394 aaKnown RBP8.64□□□□□ -1.03
CTNND1-218ENST00000528232 ADGBQ8N7X0 1667 aa8.64□□□□□ -1.03
CTNND1-218ENST00000528232 HSP90B2PQ58FF3 399 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 WDR7Q9Y4E6 1490 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 GCC2Q8IWJ2 1684 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 RARSP54136 660 aaKnown RBP8.63□□□□□ -1.03
CTNND1-218ENST00000528232 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
CTNND1-218ENST00000528232 BICD2Q8TD16 824 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 DCTN1Q14203 1278 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 RPAP2Q8IXW5 612 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-218ENST00000528232 NEUROD6Q96NK8 337 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
CTNND1-218ENST00000528232 ZNF518AQ6AHZ1 1483 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-218ENST00000528232 CREBRFQ8IUR6 639 aa8.63□□□□□ -1.03
CTNND1-218ENST00000528232 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-218ENST00000528232 CWC22Q9HCG8 908 aaKnown RBP8.63□□□□□ -1.03
CTNND1-218ENST00000528232 ERICH2A1L162 156 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 TPD52L1Q16890 204 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-218ENST00000528232 HOOK1Q9UJC3 728 aaKnown RBP8.62□□□□□ -1.03
CTNND1-218ENST00000528232 SPG7Q9UQ90 795 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 LETM1O95202 739 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-218ENST00000528232 DNAJC2Q99543 621 aaKnown RBP8.62□□□□□ -1.03
CTNND1-218ENST00000528232 ADGRL2O95490 1459 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 A2MP01023 1474 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 TRAK2O60296 914 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 AXDND1Q5T1B0 1012 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-218ENST00000528232 NFXL1Q6ZNB6 911 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 VPS37DQ86XT2 251 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 TMEM57Q8N5G2 664 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
CTNND1-218ENST00000528232 MBD3O95983 291 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 TPM1P09493 284 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 CCAR2Q8N163 923 aaKnown RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 ASXL2Q76L83 1435 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 GNAT3A8MTJ3 354 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 K7ELQ4 463 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 PES1O00541 588 aaKnown RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 KIF6Q6ZMV9 814 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 RALYLQ86SE5 291 aaKnown RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 SLC26A8Q96RN1 970 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 MARCH6O60337 910 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 NEK4P51957 841 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 IRX3P78415 501 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 RRP12Q5JTH9 1297 aaKnown RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 DUSP27Q5VZP5 1158 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 SASS6Q6UVJ0 657 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 DISP1Q96F81 1524 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-218ENST00000528232 WASHC4Q2M389 1173 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 KCNH5Q8NCM2 988 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 MAST1Q9Y2H9 1570 aa8.61□□□□□ -1.03
CTNND1-218ENST00000528232 IDI1Q13907 227 aa8.6□□□□□ -1.03
CTNND1-218ENST00000528232 CCDC73Q6ZRK6 1079 aa8.6□□□□□ -1.03
CTNND1-218ENST00000528232 FAM107BQ9H098 131 aa8.6□□□□□ -1.03
CTNND1-218ENST00000528232 PZPP20742 1482 aa8.6□□□□□ -1.03
CTNND1-218ENST00000528232 CCP110O43303 1012 aa8.6□□□□□ -1.03
CTNND1-218ENST00000528232 CTR9Q6PD62 1173 aa8.6□□□□□ -1.03
CTNND1-218ENST00000528232 IL16Q14005 1332 aa8.6□□□□□ -1.03
CTNND1-218ENST00000528232 ABCC2Q92887 1545 aa8.59□□□□□ -1.03
CTNND1-218ENST00000528232 H0YHG0 523 aa8.59□□□□□ -1.03
CTNND1-218ENST00000528232 CIZ1Q9ULV3 898 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-218ENST00000528232 PDCP20941 246 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms