RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 LTN1O94822 1766 aa26.02■■□□□ 1.76
UBXN1-208ENST00000527421 KRT27Q7Z3Y8 459 aa26.01■■□□□ 1.75
UBXN1-208ENST00000527421 RGPD5Q99666 1765 aa26.01■■□□□ 1.75
UBXN1-208ENST00000527421 USP35Q9P2H5 1018 aa26.01■■□□□ 1.75
UBXN1-208ENST00000527421 CRB1P82279 1406 aa25.99■■□□□ 1.75
UBXN1-208ENST00000527421 HSPA5P11021 654 aaKnown RBP25.98■■□□□ 1.75
UBXN1-208ENST00000527421 BARGINQ6ZT62 677 aa25.97■■□□□ 1.75
UBXN1-208ENST00000527421 TCP11L2Q8N4U5 519 aa25.97■■□□□ 1.75
UBXN1-208ENST00000527421 EP400Q96L91 3159 aa25.97■■□□□ 1.75
UBXN1-208ENST00000527421 KIF20BQ96Q89 1820 aa25.96■■□□□ 1.75
UBXN1-208ENST00000527421 SRCAPQ6ZRS2 3230 aa25.95■■□□□ 1.75
UBXN1-208ENST00000527421 AXIN2Q9Y2T1 843 aa25.95■■□□□ 1.74
UBXN1-208ENST00000527421 WDR17Q8IZU2 1322 aa25.94■■□□□ 1.74
UBXN1-208ENST00000527421 CCDC125Q86Z20 511 aa25.94■■□□□ 1.74
UBXN1-208ENST00000527421 COG3Q96JB2 828 aa25.94■■□□□ 1.74
UBXN1-208ENST00000527421 THRAP3Q9Y2W1 955 aaKnown RBP25.94■■□□□ 1.74
UBXN1-208ENST00000527421 TOM1L2Q6ZVM7 507 aa25.93■■□□□ 1.74
UBXN1-208ENST00000527421 BLMP54132 1417 aaPredicted RBP25.93■■□□□ 1.74
UBXN1-208ENST00000527421 WNK3Q9BYP7 1800 aa25.93■■□□□ 1.74
UBXN1-208ENST00000527421 POLR3GLQ9BT43 218 aa25.92■■□□□ 1.74
UBXN1-208ENST00000527421 PARP4Q9UKK3 1724 aaKnown RBP25.91■■□□□ 1.74
UBXN1-208ENST00000527421 CSB-PGBD3P0DP91 1061 aa25.9■■□□□ 1.74
UBXN1-208ENST00000527421 NSD3Q9BZ95 1437 aa25.89■■□□□ 1.74
UBXN1-208ENST00000527421 FYB1O15117 783 aa25.87■■□□□ 1.73
UBXN1-208ENST00000527421 LRRC37A3O60309 1634 aa25.86■■□□□ 1.73
UBXN1-208ENST00000527421 GGNBP2Q9H3C7 697 aa25.86■■□□□ 1.73
UBXN1-208ENST00000527421 RGPD1P0DJD0 1748 aa25.85■■□□□ 1.73
UBXN1-208ENST00000527421 SF3B2Q13435 895 aaKnown RBP25.85■■□□□ 1.73
UBXN1-208ENST00000527421 FAM182BQ5T319 152 aa25.85■■□□□ 1.73
UBXN1-208ENST00000527421 CARD14Q9BXL6 1004 aa25.85■■□□□ 1.73
UBXN1-208ENST00000527421 ERBB3P21860 1342 aa25.85■■□□□ 1.73
UBXN1-208ENST00000527421 PDE3BQ13370 1112 aa25.84■■□□□ 1.73
UBXN1-208ENST00000527421 CARD10Q9BWT7 1032 aa25.84■■□□□ 1.73
UBXN1-208ENST00000527421 CCDC7Q96M83 1385 aa25.83■■□□□ 1.73
UBXN1-208ENST00000527421 FAM208AQ9UK61 1670 aaKnown RBP25.83■■□□□ 1.73
UBXN1-208ENST00000527421 MAP3K19Q56UN5 1328 aa25.82■■□□□ 1.72
UBXN1-208ENST00000527421 CDCA7Q9BWT1 371 aaPredicted RBP25.81■■□□□ 1.72
UBXN1-208ENST00000527421 FAM196AQ6ZSG2 479 aa25.8■■□□□ 1.72
UBXN1-208ENST00000527421 ANKRD24Q8TF21 1146 aa25.8■■□□□ 1.72
UBXN1-208ENST00000527421 IP6K1Q92551 441 aa25.8■■□□□ 1.72
UBXN1-208ENST00000527421 RTL1A6NKG5 1358 aa25.8■■□□□ 1.72
UBXN1-208ENST00000527421 CGNL1Q0VF96 1302 aa25.79■■□□□ 1.72
UBXN1-208ENST00000527421 TNS1Q9HBL0 1735 aaKnown RBP25.79■■□□□ 1.72
UBXN1-208ENST00000527421 DISP2A7MBM2 1401 aa25.79■■□□□ 1.72
UBXN1-208ENST00000527421 AMPHP49418 695 aa25.78■■□□□ 1.72
UBXN1-208ENST00000527421 NLRP2Q9NX02 1062 aa25.78■■□□□ 1.72
UBXN1-208ENST00000527421 FBLN1P23142 703 aa25.77■■□□□ 1.72
UBXN1-208ENST00000527421 DDB1Q16531 1140 aa25.77■■□□□ 1.72
UBXN1-208ENST00000527421 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
UBXN1-208ENST00000527421 HOXC9P31274 260 aa25.76■■□□□ 1.71
UBXN1-208ENST00000527421 C11orf95C9JLR9 678 aaPredicted RBP25.75■■□□□ 1.71
UBXN1-208ENST00000527421 RRS1Q15050 365 aaKnown RBP25.75■■□□□ 1.71
UBXN1-208ENST00000527421 DEFB132Q7Z7B7 95 aa25.75■■□□□ 1.71
UBXN1-208ENST00000527421 PEAK1Q9H792 1746 aa25.74■■□□□ 1.71
UBXN1-208ENST00000527421 OVOS2A0A0G2JMS6 1433 aa25.74■■□□□ 1.71
UBXN1-208ENST00000527421 BAG6P46379 1132 aa25.74■■□□□ 1.71
UBXN1-208ENST00000527421 LTV1Q96GA3 475 aaPredicted RBP25.73■■□□□ 1.71
UBXN1-208ENST00000527421 PANK3Q9H999 370 aa25.72■■□□□ 1.71
UBXN1-208ENST00000527421 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
UBXN1-208ENST00000527421 TRIM37O94972 964 aa25.71■■□□□ 1.71
UBXN1-208ENST00000527421 KIF24Q5T7B8 1368 aa25.7■■□□□ 1.71
UBXN1-208ENST00000527421 KIF7Q2M1P5 1343 aa25.7■■□□□ 1.71
UBXN1-208ENST00000527421 SMG6Q86US8 1419 aaKnown RBP25.7■■□□□ 1.7
UBXN1-208ENST00000527421 FLT4P35916 1363 aa25.69■■□□□ 1.7
UBXN1-208ENST00000527421 RGPD2P0DJD1 1756 aa25.69■■□□□ 1.7
UBXN1-208ENST00000527421 IL2RBP14784 551 aa25.68■■□□□ 1.7
UBXN1-208ENST00000527421 SBF2Q86WG5 1849 aa25.67■■□□□ 1.7
UBXN1-208ENST00000527421 EXOC5O00471 708 aa25.67■■□□□ 1.7
UBXN1-208ENST00000527421 MAP2P11137 1827 aaKnown RBP25.66■■□□□ 1.7
UBXN1-208ENST00000527421 NSD2O96028 1365 aa25.66■■□□□ 1.7
UBXN1-208ENST00000527421 INSRP06213 1382 aa25.66■■□□□ 1.7
UBXN1-208ENST00000527421 MARCH10Q8NA82 808 aaPredicted RBP25.65■■□□□ 1.7
UBXN1-208ENST00000527421 EMILIN1Q9Y6C2 1016 aa25.64■■□□□ 1.7
UBXN1-208ENST00000527421 BCL9O00512 1426 aa25.63■■□□□ 1.69
UBXN1-208ENST00000527421 EN1Q05925 392 aaPredicted RBP25.63■■□□□ 1.69
UBXN1-208ENST00000527421 HSP90AB2PQ58FF8 381 aa25.62■■□□□ 1.69
UBXN1-208ENST00000527421 APBA3O96018 575 aa25.61■■□□□ 1.69
UBXN1-208ENST00000527421 PARD3Q8TEW0 1356 aa25.6■■□□□ 1.69
UBXN1-208ENST00000527421 PPM1GO15355 546 aaPredicted RBP25.6■■□□□ 1.69
UBXN1-208ENST00000527421 KNSTRNQ9Y448 316 aa25.6■■□□□ 1.69
UBXN1-208ENST00000527421 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.69
UBXN1-208ENST00000527421 NBPF6Q5VWK0 638 aa25.57■■□□□ 1.68
UBXN1-208ENST00000527421 NBPF4Q96M43 638 aa25.57■■□□□ 1.68
UBXN1-208ENST00000527421 RREB1Q92766 1687 aa25.57■■□□□ 1.68
UBXN1-208ENST00000527421 MEGF6O75095 1541 aa25.57■■□□□ 1.68
UBXN1-208ENST00000527421 RGPD3A6NKT7 1758 aaPredicted RBP25.56■■□□□ 1.68
UBXN1-208ENST00000527421 RGPD4Q7Z3J3 1758 aa25.56■■□□□ 1.68
UBXN1-208ENST00000527421 EZH2Q15910 746 aaKnown RBP25.56■■□□□ 1.68
UBXN1-208ENST00000527421 CAMKK2Q96RR4 588 aa25.56■■□□□ 1.68
UBXN1-208ENST00000527421 POLKQ9UBT6 870 aa25.56■■□□□ 1.68
UBXN1-208ENST00000527421 NHSQ6T4R5 1651 aa25.55■■□□□ 1.68
UBXN1-208ENST00000527421 USHBP1Q8N6Y0 703 aa25.55■■□□□ 1.68
UBXN1-208ENST00000527421 WASHC2AQ641Q2 1341 aa25.55■■□□□ 1.68
UBXN1-208ENST00000527421 LRP5O75197 1615 aa25.55■■□□□ 1.68
UBXN1-208ENST00000527421 SHANK3Q9BYB0 1731 aa25.54■■□□□ 1.68
UBXN1-208ENST00000527421 BCL11BQ9C0K0 894 aaPredicted RBP25.54■■□□□ 1.68
UBXN1-208ENST00000527421 MORC1Q86VD1 984 aa25.53■■□□□ 1.68
UBXN1-208ENST00000527421 NUP188Q5SRE5 1749 aa25.53■■□□□ 1.68
UBXN1-208ENST00000527421 RAPGEF4Q8WZA2 1011 aa25.52■■□□□ 1.68
UBXN1-208ENST00000527421 AMER1Q5JTC6 1135 aaPredicted RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms