RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 NLRP6P59044 892 aa16.86■□□□□ 0.29
CAPN1-204ENST00000526468 THRAP3Q9Y2W1 955 aaKnown RBP16.86■□□□□ 0.29
CAPN1-204ENST00000526468 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
CAPN1-204ENST00000526468 AATKQ6ZMQ8 1374 aa16.86■□□□□ 0.29
CAPN1-204ENST00000526468 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
CAPN1-204ENST00000526468 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
CAPN1-204ENST00000526468 BTAF1O14981 1849 aa16.84■□□□□ 0.29
CAPN1-204ENST00000526468 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
CAPN1-204ENST00000526468 MYOM1P52179 1685 aa16.84■□□□□ 0.29
CAPN1-204ENST00000526468 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
CAPN1-204ENST00000526468 SOX12O15370 315 aa16.81■□□□□ 0.28
CAPN1-204ENST00000526468 WDR17Q8IZU2 1322 aa16.8■□□□□ 0.28
CAPN1-204ENST00000526468 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
CAPN1-204ENST00000526468 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
CAPN1-204ENST00000526468 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
CAPN1-204ENST00000526468 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
CAPN1-204ENST00000526468 DDB1Q16531 1140 aa16.79■□□□□ 0.28
CAPN1-204ENST00000526468 TTC21BQ7Z4L5 1316 aa16.78■□□□□ 0.28
CAPN1-204ENST00000526468 C11orf95C9JLR9 678 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-204ENST00000526468 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
CAPN1-204ENST00000526468 CHD4Q14839 1912 aa16.78■□□□□ 0.28
CAPN1-204ENST00000526468 TUBGCP6Q96RT7 1819 aa16.77■□□□□ 0.28
CAPN1-204ENST00000526468 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
CAPN1-204ENST00000526468 DOT1LQ8TEK3 1739 aa16.77■□□□□ 0.28
CAPN1-204ENST00000526468 CSB-PGBD3P0DP91 1061 aa16.77■□□□□ 0.28
CAPN1-204ENST00000526468 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
CAPN1-204ENST00000526468 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
CAPN1-204ENST00000526468 KIF20BQ96Q89 1820 aa16.75■□□□□ 0.27
CAPN1-204ENST00000526468 PAPPAQ13219 1627 aa16.75■□□□□ 0.27
CAPN1-204ENST00000526468 KCNH5Q8NCM2 988 aa16.75■□□□□ 0.27
CAPN1-204ENST00000526468 PPP1R1BQ9UD71 204 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-204ENST00000526468 QSER1Q2KHR3 1735 aa16.75■□□□□ 0.27
CAPN1-204ENST00000526468 SHANK3Q9BYB0 1731 aa16.75■□□□□ 0.27
CAPN1-204ENST00000526468 CD163L1Q9NR16 1453 aa16.74■□□□□ 0.27
CAPN1-204ENST00000526468 AXIN2Q9Y2T1 843 aa16.74■□□□□ 0.27
CAPN1-204ENST00000526468 CCDC7Q96M83 1385 aa16.74■□□□□ 0.27
CAPN1-204ENST00000526468 BCL9O00512 1426 aa16.73■□□□□ 0.27
CAPN1-204ENST00000526468 ARHGEF25Q86VW2 580 aa16.73■□□□□ 0.27
CAPN1-204ENST00000526468 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-204ENST00000526468 CDCA7Q9BWT1 371 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-204ENST00000526468 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
CAPN1-204ENST00000526468 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
CAPN1-204ENST00000526468 ANO8Q9HCE9 1232 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-204ENST00000526468 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
CAPN1-204ENST00000526468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
CAPN1-204ENST00000526468 MARCH10Q8NA82 808 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-204ENST00000526468 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
CAPN1-204ENST00000526468 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-204ENST00000526468 EDC4Q6P2E9 1401 aaKnown RBP16.69■□□□□ 0.26
CAPN1-204ENST00000526468 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
CAPN1-204ENST00000526468 PLSCR1O15162 318 aa16.68■□□□□ 0.26
CAPN1-204ENST00000526468 KCNQ2O43526 872 aa16.68■□□□□ 0.26
CAPN1-204ENST00000526468 ERBB3P21860 1342 aa16.68■□□□□ 0.26
CAPN1-204ENST00000526468 LY75O60449 1722 aa16.67■□□□□ 0.26
CAPN1-204ENST00000526468 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
CAPN1-204ENST00000526468 CARD11Q9BXL7 1154 aa16.67■□□□□ 0.26
CAPN1-204ENST00000526468 A0A1W2PP64 1363 aa16.66■□□□□ 0.26
CAPN1-204ENST00000526468 NME9Q86XW9 330 aa16.66■□□□□ 0.26
CAPN1-204ENST00000526468 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
CAPN1-204ENST00000526468 EXOC5O00471 708 aa16.64■□□□□ 0.25
CAPN1-204ENST00000526468 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-204ENST00000526468 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-204ENST00000526468 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
CAPN1-204ENST00000526468 COL24A1Q17RW2 1714 aa16.63■□□□□ 0.25
CAPN1-204ENST00000526468 YY1P25490 414 aa16.63■□□□□ 0.25
CAPN1-204ENST00000526468 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
CAPN1-204ENST00000526468 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
CAPN1-204ENST00000526468 ZBTB7AO95365 584 aa16.62■□□□□ 0.25
CAPN1-204ENST00000526468 TXNRD1Q16881 649 aa16.62■□□□□ 0.25
CAPN1-204ENST00000526468 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-204ENST00000526468 ACSBG1Q96GR2 724 aa16.61■□□□□ 0.25
CAPN1-204ENST00000526468 C5P01031 1676 aa16.61■□□□□ 0.25
CAPN1-204ENST00000526468 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
CAPN1-204ENST00000526468 IL2RBP14784 551 aa16.6■□□□□ 0.25
CAPN1-204ENST00000526468 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
CAPN1-204ENST00000526468 ITGB4P16144 1822 aa16.59■□□□□ 0.25
CAPN1-204ENST00000526468 PROM2Q8N271 834 aa16.59■□□□□ 0.25
CAPN1-204ENST00000526468 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
CAPN1-204ENST00000526468 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
CAPN1-204ENST00000526468 SLC15A2Q16348 729 aa16.57■□□□□ 0.24
CAPN1-204ENST00000526468 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
CAPN1-204ENST00000526468 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-204ENST00000526468 UTRNP46939 3433 aa16.56■□□□□ 0.24
CAPN1-204ENST00000526468 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
CAPN1-204ENST00000526468 PKD1L3Q7Z443 1732 aa16.55■□□□□ 0.24
CAPN1-204ENST00000526468 MEGF6O75095 1541 aa16.55■□□□□ 0.24
CAPN1-204ENST00000526468 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
CAPN1-204ENST00000526468 PTGER2P43116 358 aa16.54■□□□□ 0.24
CAPN1-204ENST00000526468 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-204ENST00000526468 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
CAPN1-204ENST00000526468 RTL1A6NKG5 1358 aa16.52■□□□□ 0.24
CAPN1-204ENST00000526468 ANKRD36BQ8N2N9 1353 aa16.51■□□□□ 0.23
CAPN1-204ENST00000526468 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
CAPN1-204ENST00000526468 COG3Q96JB2 828 aa16.51■□□□□ 0.23
CAPN1-204ENST00000526468 FHDC1Q9C0D6 1143 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-204ENST00000526468 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
CAPN1-204ENST00000526468 MAP3K19Q56UN5 1328 aa16.5■□□□□ 0.23
CAPN1-204ENST00000526468 IP6K1Q92551 441 aa16.5■□□□□ 0.23
CAPN1-204ENST00000526468 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
CAPN1-204ENST00000526468 DDX54Q8TDD1 881 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms