RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 CCDC9Q9Y3X0 531 aaKnown RBP27.32■■□□□ 1.96
EXOSC4-202ENST00000525936 SPATA31A1Q5TZJ5 1347 aa27.32■■□□□ 1.96
EXOSC4-202ENST00000525936 ZBTB7CA1YPR0 619 aa27.3■■□□□ 1.96
EXOSC4-202ENST00000525936 LARP1Q6PKG0 1096 aaKnown RBP27.3■■□□□ 1.96
EXOSC4-202ENST00000525936 WASHC2AQ641Q2 1341 aa27.29■■□□□ 1.96
EXOSC4-202ENST00000525936 KIF20BQ96Q89 1820 aa27.29■■□□□ 1.96
EXOSC4-202ENST00000525936 CCDC7Q96M83 1385 aa27.28■■□□□ 1.96
EXOSC4-202ENST00000525936 CGNL1Q0VF96 1302 aa27.28■■□□□ 1.96
EXOSC4-202ENST00000525936 FBLN1P23142 703 aa27.27■■□□□ 1.96
EXOSC4-202ENST00000525936 SEPT12Q8IYM1 358 aa27.26■■□□□ 1.95
EXOSC4-202ENST00000525936 LTN1O94822 1766 aa27.26■■□□□ 1.95
EXOSC4-202ENST00000525936 FAM98CQ17RN3 349 aaKnown RBP27.25■■□□□ 1.95
EXOSC4-202ENST00000525936 RGPD5Q99666 1765 aa27.25■■□□□ 1.95
EXOSC4-202ENST00000525936 CRB1P82279 1406 aa27.24■■□□□ 1.95
EXOSC4-202ENST00000525936 MAP3K19Q56UN5 1328 aa27.24■■□□□ 1.95
EXOSC4-202ENST00000525936 WDR17Q8IZU2 1322 aa27.24■■□□□ 1.95
EXOSC4-202ENST00000525936 BARGINQ6ZT62 677 aa27.24■■□□□ 1.95
EXOSC4-202ENST00000525936 IP6K1Q92551 441 aa27.24■■□□□ 1.95
EXOSC4-202ENST00000525936 THRAP3Q9Y2W1 955 aaKnown RBP27.22■■□□□ 1.95
EXOSC4-202ENST00000525936 EP400Q96L91 3159 aa27.21■■□□□ 1.95
EXOSC4-202ENST00000525936 PER1O15534 1290 aaPredicted RBP27.21■■□□□ 1.95
EXOSC4-202ENST00000525936 TCP11L2Q8N4U5 519 aa27.21■■□□□ 1.95
EXOSC4-202ENST00000525936 THSD7AQ9UPZ6 1657 aa27.21■■□□□ 1.95
EXOSC4-202ENST00000525936 ERBB3P21860 1342 aa27.19■■□□□ 1.94
EXOSC4-202ENST00000525936 BLMP54132 1417 aaPredicted RBP27.19■■□□□ 1.94
EXOSC4-202ENST00000525936 USP35Q9P2H5 1018 aa27.19■■□□□ 1.94
EXOSC4-202ENST00000525936 BRWD3Q6RI45 1802 aa27.18■■□□□ 1.94
EXOSC4-202ENST00000525936 RRS1Q15050 365 aaKnown RBP27.18■■□□□ 1.94
EXOSC4-202ENST00000525936 CARD10Q9BWT7 1032 aa27.18■■□□□ 1.94
EXOSC4-202ENST00000525936 HOXC9P31274 260 aa27.17■■□□□ 1.94
EXOSC4-202ENST00000525936 TOM1L2Q6ZVM7 507 aa27.17■■□□□ 1.94
EXOSC4-202ENST00000525936 NSD2O96028 1365 aa27.17■■□□□ 1.94
EXOSC4-202ENST00000525936 ZEB1P37275 1124 aaPredicted RBP27.16■■□□□ 1.94
EXOSC4-202ENST00000525936 AMER1Q5JTC6 1135 aaPredicted RBP27.16■■□□□ 1.94
EXOSC4-202ENST00000525936 KNSTRNQ9Y448 316 aa27.16■■□□□ 1.94
EXOSC4-202ENST00000525936 RTL1A6NKG5 1358 aa27.16■■□□□ 1.94
EXOSC4-202ENST00000525936 KIF24Q5T7B8 1368 aa27.15■■□□□ 1.94
EXOSC4-202ENST00000525936 ANKRD24Q8TF21 1146 aa27.15■■□□□ 1.94
EXOSC4-202ENST00000525936 UPF1Q92900 1129 aaKnown RBP eCLIP27.15■■□□□ 1.94
EXOSC4-202ENST00000525936 ANKRD26Q9UPS8 1709 aa27.15■■□□□ 1.94
EXOSC4-202ENST00000525936 AMPHP49418 695 aa27.14■■□□□ 1.94
EXOSC4-202ENST00000525936 KRT27Q7Z3Y8 459 aa27.14■■□□□ 1.94
EXOSC4-202ENST00000525936 CSB-PGBD3P0DP91 1061 aa27.13■■□□□ 1.93
EXOSC4-202ENST00000525936 PEAK1Q9H792 1746 aa27.1■■□□□ 1.93
EXOSC4-202ENST00000525936 A0A0G2JS52 829 aa27.09■■□□□ 1.93
EXOSC4-202ENST00000525936 MYT1Q01538 1121 aa27.09■■□□□ 1.93
EXOSC4-202ENST00000525936 POLKQ9UBT6 870 aa27.09■■□□□ 1.93
EXOSC4-202ENST00000525936 EMILIN1Q9Y6C2 1016 aa27.09■■□□□ 1.93
EXOSC4-202ENST00000525936 INSRP06213 1382 aa27.09■■□□□ 1.93
EXOSC4-202ENST00000525936 FLT4P35916 1363 aa27.09■■□□□ 1.93
EXOSC4-202ENST00000525936 DISP2A7MBM2 1401 aa27.07■■□□□ 1.92
EXOSC4-202ENST00000525936 HSP90AB2PQ58FF8 381 aa27.07■■□□□ 1.92
EXOSC4-202ENST00000525936 CDCA7Q9BWT1 371 aaPredicted RBP27.07■■□□□ 1.92
EXOSC4-202ENST00000525936 NLRP2Q9NX02 1062 aa27.07■■□□□ 1.92
EXOSC4-202ENST00000525936 PARP4Q9UKK3 1724 aaKnown RBP27.07■■□□□ 1.92
EXOSC4-202ENST00000525936 MAP2P11137 1827 aaKnown RBP27.06■■□□□ 1.92
EXOSC4-202ENST00000525936 NPC1L1Q9UHC9 1359 aa27.06■■□□□ 1.92
EXOSC4-202ENST00000525936 MORC1Q86VD1 984 aa27.05■■□□□ 1.92
EXOSC4-202ENST00000525936 LTV1Q96GA3 475 aaPredicted RBP27.04■■□□□ 1.92
EXOSC4-202ENST00000525936 FAM208AQ9UK61 1670 aaKnown RBP27.04■■□□□ 1.92
EXOSC4-202ENST00000525936 TNNT2P45379 298 aaPredicted RBP27.03■■□□□ 1.92
EXOSC4-202ENST00000525936 WNK3Q9BYP7 1800 aa27.03■■□□□ 1.92
EXOSC4-202ENST00000525936 CCDC125Q86Z20 511 aa27.01■■□□□ 1.91
EXOSC4-202ENST00000525936 SMG6Q86US8 1419 aaKnown RBP27■■□□□ 1.91
EXOSC4-202ENST00000525936 PDE3BQ13370 1112 aa27■■□□□ 1.91
EXOSC4-202ENST00000525936 FAM182BQ5T319 152 aa27■■□□□ 1.91
EXOSC4-202ENST00000525936 LRRC37A3O60309 1634 aa26.99■■□□□ 1.91
EXOSC4-202ENST00000525936 DDB1Q16531 1140 aa26.99■■□□□ 1.91
EXOSC4-202ENST00000525936 NBPF6Q5VWK0 638 aa26.99■■□□□ 1.91
EXOSC4-202ENST00000525936 NBPF4Q96M43 638 aa26.99■■□□□ 1.91
EXOSC4-202ENST00000525936 PPM1GO15355 546 aaPredicted RBP26.98■■□□□ 1.91
EXOSC4-202ENST00000525936 IL2RBP14784 551 aa26.97■■□□□ 1.91
EXOSC4-202ENST00000525936 RGPD2P0DJD1 1756 aa26.97■■□□□ 1.91
EXOSC4-202ENST00000525936 FAM196AQ6ZSG2 479 aa26.96■■□□□ 1.91
EXOSC4-202ENST00000525936 EXOC5O00471 708 aa26.95■■□□□ 1.9
EXOSC4-202ENST00000525936 CC2D1BQ5T0F9 858 aaKnown RBP26.95■■□□□ 1.9
EXOSC4-202ENST00000525936 MARCH10Q8NA82 808 aaPredicted RBP26.93■■□□□ 1.9
EXOSC4-202ENST00000525936 NCAPD2Q15021 1401 aa26.92■■□□□ 1.9
EXOSC4-202ENST00000525936 BCL9O00512 1426 aa26.9■■□□□ 1.9
EXOSC4-202ENST00000525936 TNS2Q63HR2 1409 aa26.9■■□□□ 1.9
EXOSC4-202ENST00000525936 EIF4A2Q14240 407 aaKnown RBP26.9■■□□□ 1.9
EXOSC4-202ENST00000525936 USHBP1Q8N6Y0 703 aa26.88■■□□□ 1.89
EXOSC4-202ENST00000525936 EYA1Q99502 592 aa26.88■■□□□ 1.89
EXOSC4-202ENST00000525936 OVOS2A0A0G2JMS6 1433 aa26.88■■□□□ 1.89
EXOSC4-202ENST00000525936 MEGF6O75095 1541 aa26.87■■□□□ 1.89
EXOSC4-202ENST00000525936 MTHFSP49914 203 aa26.86■■□□□ 1.89
EXOSC4-202ENST00000525936 TRIM37O94972 964 aa26.83■■□□□ 1.89
EXOSC4-202ENST00000525936 RGPD1P0DJD0 1748 aa26.82■■□□□ 1.88
EXOSC4-202ENST00000525936 RAPGEF4Q8WZA2 1011 aa26.82■■□□□ 1.88
EXOSC4-202ENST00000525936 IGSF1Q8N6C5 1336 aa26.82■■□□□ 1.88
EXOSC4-202ENST00000525936 IL13P35225 146 aa26.81■■□□□ 1.88
EXOSC4-202ENST00000525936 SF3B2Q13435 895 aaKnown RBP26.81■■□□□ 1.88
EXOSC4-202ENST00000525936 ZCRB1Q8TBF4 217 aaKnown RBP26.81■■□□□ 1.88
EXOSC4-202ENST00000525936 TNS1Q9HBL0 1735 aaKnown RBP26.81■■□□□ 1.88
EXOSC4-202ENST00000525936 TATP17735 454 aaPredicted RBP26.8■■□□□ 1.88
EXOSC4-202ENST00000525936 DEFB132Q7Z7B7 95 aa26.8■■□□□ 1.88
EXOSC4-202ENST00000525936 SBF2Q86WG5 1849 aa26.8■■□□□ 1.88
EXOSC4-202ENST00000525936 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
EXOSC4-202ENST00000525936 CNGB1Q14028 1251 aaPredicted RBP26.79■■□□□ 1.88
EXOSC4-202ENST00000525936 SHANK3Q9BYB0 1731 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms