RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 KCTD15Q96SI1 283 aaPredicted RBP11.93□□□□□ -0.5
COPB1-203ENST00000525214 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
COPB1-203ENST00000525214 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
COPB1-203ENST00000525214 CCDC116Q8IYX3 515 aa11.92□□□□□ -0.5
COPB1-203ENST00000525214 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
COPB1-203ENST00000525214 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
COPB1-203ENST00000525214 ZBBXA8MT70 800 aa11.9□□□□□ -0.5
COPB1-203ENST00000525214 INTS6LQ5JSJ4 861 aaKnown RBP11.9□□□□□ -0.5
COPB1-203ENST00000525214 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
COPB1-203ENST00000525214 NDUFB9Q9Y6M9 179 aa11.9□□□□□ -0.5
COPB1-203ENST00000525214 PPP1R26Q5T8A7 1209 aaPredicted RBP11.88□□□□□ -0.51
COPB1-203ENST00000525214 MRPL14Q6P1L8 145 aaKnown RBP11.88□□□□□ -0.51
COPB1-203ENST00000525214 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
COPB1-203ENST00000525214 ZFP42Q96MM3 310 aa11.87□□□□□ -0.51
COPB1-203ENST00000525214 EMILIN1Q9Y6C2 1016 aa11.87□□□□□ -0.51
COPB1-203ENST00000525214 NBPF20Q3BBV1 942 aa11.86□□□□□ -0.51
COPB1-203ENST00000525214 MEIOBQ8N635 442 aa11.86□□□□□ -0.51
COPB1-203ENST00000525214 KIFC2Q96AC6 838 aa11.86□□□□□ -0.51
COPB1-203ENST00000525214 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
COPB1-203ENST00000525214 ESPNB1AK53 854 aa11.85□□□□□ -0.51
COPB1-203ENST00000525214 APBB1O00213 710 aa11.85□□□□□ -0.51
COPB1-203ENST00000525214 NR1H3Q13133 447 aa11.84□□□□□ -0.51
COPB1-203ENST00000525214 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
COPB1-203ENST00000525214 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
COPB1-203ENST00000525214 CBLBQ13191 982 aa11.82□□□□□ -0.52
COPB1-203ENST00000525214 MCM6Q14566 821 aa11.82□□□□□ -0.52
COPB1-203ENST00000525214 RAB15P59190 212 aa11.81□□□□□ -0.52
COPB1-203ENST00000525214 DHX9Q08211 1270 aaKnown RBP11.81□□□□□ -0.52
COPB1-203ENST00000525214 TMPRSS4Q9NRS4 437 aa11.81□□□□□ -0.52
COPB1-203ENST00000525214 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
COPB1-203ENST00000525214 IRF5Q13568 498 aa11.8□□□□□ -0.52
COPB1-203ENST00000525214 SCARF1Q14162 830 aa11.8□□□□□ -0.52
COPB1-203ENST00000525214 Q6ZVU0 165 aa11.8□□□□□ -0.52
COPB1-203ENST00000525214 LINC00528Q8N1L1 170 aa11.8□□□□□ -0.52
COPB1-203ENST00000525214 ERVH48-1M5A8F1 160 aa11.79□□□□□ -0.52
COPB1-203ENST00000525214 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
COPB1-203ENST00000525214 C6orf118Q5T5N4 469 aa11.79□□□□□ -0.52
COPB1-203ENST00000525214 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.53
COPB1-203ENST00000525214 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
COPB1-203ENST00000525214 GDPD2Q9HCC8 539 aa11.77□□□□□ -0.53
COPB1-203ENST00000525214 LILRA1O75019 489 aa11.76□□□□□ -0.53
COPB1-203ENST00000525214 LCE2AQ5TA79 106 aaPredicted RBP11.76□□□□□ -0.53
COPB1-203ENST00000525214 SOBPA7XYQ1 873 aa11.75□□□□□ -0.53
COPB1-203ENST00000525214 BMP2P12643 396 aa11.75□□□□□ -0.53
COPB1-203ENST00000525214 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
COPB1-203ENST00000525214 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
COPB1-203ENST00000525214 UPP2O95045 317 aa11.73□□□□□ -0.53
COPB1-203ENST00000525214 ADD1P35611 737 aaKnown RBP11.73□□□□□ -0.53
COPB1-203ENST00000525214 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
COPB1-203ENST00000525214 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
COPB1-203ENST00000525214 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
COPB1-203ENST00000525214 MCCD1P59942 119 aaPredicted RBP11.72□□□□□ -0.53
COPB1-203ENST00000525214 PRM3Q9NNZ6 103 aa11.72□□□□□ -0.53
COPB1-203ENST00000525214 ZNF330Q9Y3S2 320 aaPredicted RBP11.72□□□□□ -0.53
COPB1-203ENST00000525214 ABL2P42684 1182 aa11.71□□□□□ -0.53
COPB1-203ENST00000525214 TREML4Q6UXN2 200 aa11.71□□□□□ -0.53
COPB1-203ENST00000525214 KDF1Q8NAX2 398 aaPredicted RBP11.71□□□□□ -0.53
COPB1-203ENST00000525214 SPINT1O43278 529 aa11.7□□□□□ -0.54
COPB1-203ENST00000525214 LCE2CQ5TA81 110 aa11.7□□□□□ -0.54
COPB1-203ENST00000525214 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
COPB1-203ENST00000525214 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
COPB1-203ENST00000525214 TERTO14746 1132 aaKnown RBP11.69□□□□□ -0.54
COPB1-203ENST00000525214 ADH1AP07327 375 aa11.69□□□□□ -0.54
COPB1-203ENST00000525214 RELBQ01201 579 aa11.69□□□□□ -0.54
COPB1-203ENST00000525214 VAC14Q08AM6 782 aa11.69□□□□□ -0.54
COPB1-203ENST00000525214 DNMT3LQ9UJW3 386 aa11.69□□□□□ -0.54
COPB1-203ENST00000525214 ZNF592Q92610 1267 aa11.68□□□□□ -0.54
COPB1-203ENST00000525214 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
COPB1-203ENST00000525214 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
COPB1-203ENST00000525214 NXF1Q9UBU9 619 aaKnown RBP11.67□□□□□ -0.54
COPB1-203ENST00000525214 MAN1A2O60476 641 aa11.66□□□□□ -0.54
COPB1-203ENST00000525214 WFS1O76024 890 aa11.66□□□□□ -0.54
COPB1-203ENST00000525214 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
COPB1-203ENST00000525214 TTLL8A6PVC2 850 aa11.65□□□□□ -0.54
COPB1-203ENST00000525214 SCTRP47872 440 aa11.65□□□□□ -0.54
COPB1-203ENST00000525214 ERVK-9P63128 1117 aa11.65□□□□□ -0.54
COPB1-203ENST00000525214 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
COPB1-203ENST00000525214 INSM2Q96T92 566 aaPredicted RBP11.65□□□□□ -0.54
COPB1-203ENST00000525214 ZNF395Q9H8N7 513 aaPredicted RBP11.65□□□□□ -0.54
COPB1-203ENST00000525214 CTSOP43234 321 aaPredicted RBP11.64□□□□□ -0.55
COPB1-203ENST00000525214 EIF4G2P78344 907 aaKnown RBP eCLIP11.64□□□□□ -0.55
COPB1-203ENST00000525214 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
COPB1-203ENST00000525214 PCDHB11Q9Y5F2 797 aa11.64□□□□□ -0.55
COPB1-203ENST00000525214 PTGIRP43119 386 aa11.63□□□□□ -0.55
COPB1-203ENST00000525214 VEGFBP49765 207 aa11.63□□□□□ -0.55
COPB1-203ENST00000525214 FIGNL2A6NMB9 653 aa11.62□□□□□ -0.55
COPB1-203ENST00000525214 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
COPB1-203ENST00000525214 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
COPB1-203ENST00000525214 PHTF2Q8N3S3 785 aa11.62□□□□□ -0.55
COPB1-203ENST00000525214 FLIIQ13045 1269 aa11.61□□□□□ -0.55
COPB1-203ENST00000525214 H3BM21 787 aa11.6□□□□□ -0.55
COPB1-203ENST00000525214 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
COPB1-203ENST00000525214 NPAS3Q8IXF0 933 aa11.6□□□□□ -0.55
COPB1-203ENST00000525214 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
COPB1-203ENST00000525214 FOXD4L5Q5VV16 416 aaPredicted RBP11.59□□□□□ -0.55
COPB1-203ENST00000525214 RNF217Q8TC41 542 aa11.59□□□□□ -0.55
COPB1-203ENST00000525214 OSBPL3Q9H4L5 887 aa11.59□□□□□ -0.55
COPB1-203ENST00000525214 ATP5J2-PTCD1G3V325 749 aa11.58□□□□□ -0.56
COPB1-203ENST00000525214 TRAK2O60296 914 aa11.58□□□□□ -0.56
COPB1-203ENST00000525214 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms