RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 STRN4Q9NRL3 753 aa24.14■■□□□ 1.45
PACSIN3-202ENST00000524509 BARGINQ6ZT62 677 aa24.13■■□□□ 1.45
PACSIN3-202ENST00000524509 CGNL1Q0VF96 1302 aa24.12■■□□□ 1.45
PACSIN3-202ENST00000524509 WASHC2AQ641Q2 1341 aa24.12■■□□□ 1.45
PACSIN3-202ENST00000524509 AKAP12Q02952 1782 aa24.12■■□□□ 1.45
PACSIN3-202ENST00000524509 PANK3Q9H999 370 aa24.12■■□□□ 1.45
PACSIN3-202ENST00000524509 NUP188Q5SRE5 1749 aa24.12■■□□□ 1.45
PACSIN3-202ENST00000524509 USP31Q70CQ4 1352 aa24.11■■□□□ 1.45
PACSIN3-202ENST00000524509 ZC3H6P61129 1189 aaKnown RBP24.1■■□□□ 1.45
PACSIN3-202ENST00000524509 PDE3BQ13370 1112 aa24.1■■□□□ 1.45
PACSIN3-202ENST00000524509 NBPF14Q5TI25 921 aa24.1■■□□□ 1.45
PACSIN3-202ENST00000524509 COG3Q96JB2 828 aa24.1■■□□□ 1.45
PACSIN3-202ENST00000524509 KNSTRNQ9Y448 316 aa24.1■■□□□ 1.45
PACSIN3-202ENST00000524509 MON2Q7Z3U7 1717 aa24.1■■□□□ 1.45
PACSIN3-202ENST00000524509 USP19O94966 1318 aa24.1■■□□□ 1.45
PACSIN3-202ENST00000524509 YY1P25490 414 aa24.09■■□□□ 1.45
PACSIN3-202ENST00000524509 NUTM2GQ5VZR2 741 aa24.09■■□□□ 1.45
PACSIN3-202ENST00000524509 USP35Q9P2H5 1018 aa24.09■■□□□ 1.45
PACSIN3-202ENST00000524509 EVA1CP58658 441 aa24.08■■□□□ 1.45
PACSIN3-202ENST00000524509 GCP02774 474 aa24.07■■□□□ 1.44
PACSIN3-202ENST00000524509 CARD14Q9BXL6 1004 aa24.07■■□□□ 1.44
PACSIN3-202ENST00000524509 NSD3Q9BZ95 1437 aa24.07■■□□□ 1.44
PACSIN3-202ENST00000524509 NME9Q86XW9 330 aa24.06■■□□□ 1.44
PACSIN3-202ENST00000524509 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
PACSIN3-202ENST00000524509 NRKQ7Z2Y5 1582 aa24.04■■□□□ 1.44
PACSIN3-202ENST00000524509 FYB1O15117 783 aa24.04■■□□□ 1.44
PACSIN3-202ENST00000524509 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
PACSIN3-202ENST00000524509 MYOM1P52179 1685 aa24.04■■□□□ 1.44
PACSIN3-202ENST00000524509 CPDO75976 1380 aa24.03■■□□□ 1.44
PACSIN3-202ENST00000524509 NSD2O96028 1365 aa24.03■■□□□ 1.44
PACSIN3-202ENST00000524509 LMO7Q8WWI1 1683 aa24.03■■□□□ 1.44
PACSIN3-202ENST00000524509 LARP1Q6PKG0 1096 aaKnown RBP24.03■■□□□ 1.44
PACSIN3-202ENST00000524509 SPON1Q9HCB6 807 aa24.03■■□□□ 1.44
PACSIN3-202ENST00000524509 THRAP3Q9Y2W1 955 aaKnown RBP24.02■■□□□ 1.44
PACSIN3-202ENST00000524509 KCNQ2O43526 872 aa24■■□□□ 1.43
PACSIN3-202ENST00000524509 PPP1R1BQ9UD71 204 aaPredicted RBP24■■□□□ 1.43
PACSIN3-202ENST00000524509 PARP4Q9UKK3 1724 aaKnown RBP24■■□□□ 1.43
PACSIN3-202ENST00000524509 PIK3C2AO00443 1686 aa23.99■■□□□ 1.43
PACSIN3-202ENST00000524509 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
PACSIN3-202ENST00000524509 DCAF8L1A6NGE4 600 aa23.98■■□□□ 1.43
PACSIN3-202ENST00000524509 GGNBP2Q9H3C7 697 aa23.98■■□□□ 1.43
PACSIN3-202ENST00000524509 OVOS2A0A0J9YW53 1432 aa23.98■■□□□ 1.43
PACSIN3-202ENST00000524509 OVOS2Q6IE36 1432 aa23.98■■□□□ 1.43
PACSIN3-202ENST00000524509 SLIT3O75094 1523 aa23.98■■□□□ 1.43
PACSIN3-202ENST00000524509 RGPD3A6NKT7 1758 aaPredicted RBP23.96■■□□□ 1.43
PACSIN3-202ENST00000524509 RGPD4Q7Z3J3 1758 aa23.96■■□□□ 1.43
PACSIN3-202ENST00000524509 PER1O15534 1290 aaPredicted RBP23.95■■□□□ 1.42
PACSIN3-202ENST00000524509 NPC1L1Q9UHC9 1359 aa23.94■■□□□ 1.42
PACSIN3-202ENST00000524509 ARHGEF25Q86VW2 580 aa23.94■■□□□ 1.42
PACSIN3-202ENST00000524509 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
PACSIN3-202ENST00000524509 PEAK1Q9H792 1746 aa23.93■■□□□ 1.42
PACSIN3-202ENST00000524509 AATKQ6ZMQ8 1374 aa23.93■■□□□ 1.42
PACSIN3-202ENST00000524509 USP54Q70EL1 1684 aa23.93■■□□□ 1.42
PACSIN3-202ENST00000524509 OVOS2A0A0G2JMS6 1433 aa23.93■■□□□ 1.42
PACSIN3-202ENST00000524509 PLSCR1O15162 318 aa23.92■■□□□ 1.42
PACSIN3-202ENST00000524509 SOX12O15370 315 aa23.92■■□□□ 1.42
PACSIN3-202ENST00000524509 MORC1Q86VD1 984 aa23.92■■□□□ 1.42
PACSIN3-202ENST00000524509 CRB1P82279 1406 aa23.92■■□□□ 1.42
PACSIN3-202ENST00000524509 AMER1Q5JTC6 1135 aaPredicted RBP23.91■■□□□ 1.42
PACSIN3-202ENST00000524509 SBF2Q86WG5 1849 aa23.9■■□□□ 1.42
PACSIN3-202ENST00000524509 KIF24Q5T7B8 1368 aa23.89■■□□□ 1.41
PACSIN3-202ENST00000524509 ZBTB7CA1YPR0 619 aa23.88■■□□□ 1.41
PACSIN3-202ENST00000524509 CASZ1Q86V15 1759 aa23.88■■□□□ 1.41
PACSIN3-202ENST00000524509 AMPHP49418 695 aa23.87■■□□□ 1.41
PACSIN3-202ENST00000524509 ABCC6O95255 1503 aa23.87■■□□□ 1.41
PACSIN3-202ENST00000524509 LRRC37A3O60309 1634 aa23.87■■□□□ 1.41
PACSIN3-202ENST00000524509 NFAT5O94916 1531 aa23.86■■□□□ 1.41
PACSIN3-202ENST00000524509 DDX10Q13206 875 aaKnown RBP23.86■■□□□ 1.41
PACSIN3-202ENST00000524509 DDB1Q16531 1140 aa23.85■■□□□ 1.41
PACSIN3-202ENST00000524509 IP6K1Q92551 441 aa23.85■■□□□ 1.41
PACSIN3-202ENST00000524509 BCL11BQ9C0K0 894 aaPredicted RBP23.85■■□□□ 1.41
PACSIN3-202ENST00000524509 ANO8Q9HCE9 1232 aaPredicted RBP23.85■■□□□ 1.41
PACSIN3-202ENST00000524509 RTL1A6NKG5 1358 aa23.85■■□□□ 1.41
PACSIN3-202ENST00000524509 KIF20BQ96Q89 1820 aa23.84■■□□□ 1.41
PACSIN3-202ENST00000524509 MAP3K19Q56UN5 1328 aa23.83■■□□□ 1.4
PACSIN3-202ENST00000524509 CC2D1BQ5T0F9 858 aaKnown RBP23.82■■□□□ 1.4
PACSIN3-202ENST00000524509 BCL9O00512 1426 aa23.82■■□□□ 1.4
PACSIN3-202ENST00000524509 PROM2Q8N271 834 aa23.8■■□□□ 1.4
PACSIN3-202ENST00000524509 RRS1Q15050 365 aaKnown RBP23.79■■□□□ 1.4
PACSIN3-202ENST00000524509 TOM1L2Q6ZVM7 507 aa23.79■■□□□ 1.4
PACSIN3-202ENST00000524509 PTF1AQ7RTS3 328 aa23.79■■□□□ 1.4
PACSIN3-202ENST00000524509 PDGFDQ9GZP0 370 aaPredicted RBP23.79■■□□□ 1.4
PACSIN3-202ENST00000524509 WNK3Q9BYP7 1800 aa23.79■■□□□ 1.4
PACSIN3-202ENST00000524509 FLT4P35916 1363 aa23.78■■□□□ 1.4
PACSIN3-202ENST00000524509 COL18A1P39060 1754 aa23.78■■□□□ 1.4
PACSIN3-202ENST00000524509 CSB-PGBD3P0DP91 1061 aa23.78■■□□□ 1.4
PACSIN3-202ENST00000524509 HOXC9P31274 260 aa23.78■■□□□ 1.4
PACSIN3-202ENST00000524509 TNNT2P45379 298 aaPredicted RBP23.78■■□□□ 1.4
PACSIN3-202ENST00000524509 CDCA7Q9BWT1 371 aaPredicted RBP23.78■■□□□ 1.4
PACSIN3-202ENST00000524509 PTGER2P43116 358 aa23.77■■□□□ 1.4
PACSIN3-202ENST00000524509 MARCH10Q8NA82 808 aaPredicted RBP23.77■■□□□ 1.4
PACSIN3-202ENST00000524509 WDR17Q8IZU2 1322 aa23.77■■□□□ 1.4
PACSIN3-202ENST00000524509 SMG6Q86US8 1419 aaKnown RBP23.76■■□□□ 1.39
PACSIN3-202ENST00000524509 ZBTB7AO95365 584 aa23.76■■□□□ 1.39
PACSIN3-202ENST00000524509 POLKQ9UBT6 870 aa23.76■■□□□ 1.39
PACSIN3-202ENST00000524509 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
PACSIN3-202ENST00000524509 PPM1GO15355 546 aaPredicted RBP23.75■■□□□ 1.39
PACSIN3-202ENST00000524509 ANKRD26Q9UPS8 1709 aa23.75■■□□□ 1.39
PACSIN3-202ENST00000524509 INSRP06213 1382 aa23.75■■□□□ 1.39
PACSIN3-202ENST00000524509 UTRNP46939 3433 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms