RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-224ENST00000523873 RXRBP28702 533 aa17.62■□□□□ 0.41
VEGFA-224ENST00000523873 AXIN2Q9Y2T1 843 aa17.62■□□□□ 0.41
VEGFA-224ENST00000523873 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
VEGFA-224ENST00000523873 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
VEGFA-224ENST00000523873 VPS72Q15906 364 aa17.61■□□□□ 0.41
VEGFA-224ENST00000523873 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
VEGFA-224ENST00000523873 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
VEGFA-224ENST00000523873 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-224ENST00000523873 EVA1CP58658 441 aa17.6■□□□□ 0.41
VEGFA-224ENST00000523873 RBM6P78332 1123 aaKnown RBP17.6■□□□□ 0.41
VEGFA-224ENST00000523873 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-224ENST00000523873 GJD4Q96KN9 370 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-224ENST00000523873 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
VEGFA-224ENST00000523873 RGS12O14924 1447 aa17.6■□□□□ 0.41
VEGFA-224ENST00000523873 ABCC6O95255 1503 aa17.59■□□□□ 0.41
VEGFA-224ENST00000523873 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
VEGFA-224ENST00000523873 LARP1Q6PKG0 1096 aaKnown RBP17.59■□□□□ 0.41
VEGFA-224ENST00000523873 AMER1Q5JTC6 1135 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-224ENST00000523873 NSD2O96028 1365 aa17.56■□□□□ 0.4
VEGFA-224ENST00000523873 SPATA31A5Q5VU36 1347 aa17.56■□□□□ 0.4
VEGFA-224ENST00000523873 SPATA31A7Q8IWB4 1347 aa17.56■□□□□ 0.4
VEGFA-224ENST00000523873 CC2D1BQ5T0F9 858 aaKnown RBP17.56■□□□□ 0.4
VEGFA-224ENST00000523873 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
VEGFA-224ENST00000523873 FAM208AQ9UK61 1670 aaKnown RBP17.55■□□□□ 0.4
VEGFA-224ENST00000523873 AMPHP49418 695 aa17.55■□□□□ 0.4
VEGFA-224ENST00000523873 MORC1Q86VD1 984 aa17.55■□□□□ 0.4
VEGFA-224ENST00000523873 EMILIN1Q9Y6C2 1016 aa17.55■□□□□ 0.4
VEGFA-224ENST00000523873 THSD7AQ9UPZ6 1657 aa17.55■□□□□ 0.4
VEGFA-224ENST00000523873 SPATA31A1Q5TZJ5 1347 aa17.54■□□□□ 0.4
VEGFA-224ENST00000523873 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
VEGFA-224ENST00000523873 HOXC9P31274 260 aa17.54■□□□□ 0.4
VEGFA-224ENST00000523873 IP6K1Q92551 441 aa17.54■□□□□ 0.4
VEGFA-224ENST00000523873 LTV1Q96GA3 475 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-224ENST00000523873 CDK12Q9NYV4 1490 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-224ENST00000523873 CRB1P82279 1406 aa17.54■□□□□ 0.4
VEGFA-224ENST00000523873 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
VEGFA-224ENST00000523873 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
VEGFA-224ENST00000523873 PPM1GO15355 546 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-224ENST00000523873 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
VEGFA-224ENST00000523873 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.4
VEGFA-224ENST00000523873 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
VEGFA-224ENST00000523873 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-224ENST00000523873 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
VEGFA-224ENST00000523873 ERBB3P21860 1342 aa17.51■□□□□ 0.39
VEGFA-224ENST00000523873 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
VEGFA-224ENST00000523873 A0A0G2JS52 829 aa17.5■□□□□ 0.39
VEGFA-224ENST00000523873 MYT1Q01538 1121 aa17.5■□□□□ 0.39
VEGFA-224ENST00000523873 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
VEGFA-224ENST00000523873 FLT4P35916 1363 aa17.5■□□□□ 0.39
VEGFA-224ENST00000523873 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
VEGFA-224ENST00000523873 SEPT12Q8IYM1 358 aa17.49■□□□□ 0.39
VEGFA-224ENST00000523873 LRRC37A3O60309 1634 aa17.49■□□□□ 0.39
VEGFA-224ENST00000523873 TCP11L2Q8N4U5 519 aa17.48■□□□□ 0.39
VEGFA-224ENST00000523873 NLRP2Q9NX02 1062 aa17.48■□□□□ 0.39
VEGFA-224ENST00000523873 NPC1L1Q9UHC9 1359 aa17.48■□□□□ 0.39
VEGFA-224ENST00000523873 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-224ENST00000523873 INSRP06213 1382 aa17.47■□□□□ 0.39
VEGFA-224ENST00000523873 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
VEGFA-224ENST00000523873 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
VEGFA-224ENST00000523873 ONECUT3O60422 494 aaPredicted RBP17.46■□□□□ 0.39
VEGFA-224ENST00000523873 CARD10Q9BWT7 1032 aa17.46■□□□□ 0.39
VEGFA-224ENST00000523873 BARGINQ6ZT62 677 aa17.45■□□□□ 0.38
VEGFA-224ENST00000523873 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
VEGFA-224ENST00000523873 THRAP3Q9Y2W1 955 aaKnown RBP17.43■□□□□ 0.38
VEGFA-224ENST00000523873 DISP2A7MBM2 1401 aa17.43■□□□□ 0.38
VEGFA-224ENST00000523873 SHANK3Q9BYB0 1731 aa17.42■□□□□ 0.38
VEGFA-224ENST00000523873 NBPF6Q5VWK0 638 aa17.42■□□□□ 0.38
VEGFA-224ENST00000523873 NBPF4Q96M43 638 aa17.42■□□□□ 0.38
VEGFA-224ENST00000523873 MTHFSP49914 203 aa17.41■□□□□ 0.38
VEGFA-224ENST00000523873 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
VEGFA-224ENST00000523873 FAM182BQ5T319 152 aa17.41■□□□□ 0.38
VEGFA-224ENST00000523873 KAT6BQ8WYB5 2073 aa17.4■□□□□ 0.38
VEGFA-224ENST00000523873 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
VEGFA-224ENST00000523873 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
VEGFA-224ENST00000523873 SBF2Q86WG5 1849 aa17.4■□□□□ 0.38
VEGFA-224ENST00000523873 MEGF6O75095 1541 aa17.38■□□□□ 0.37
VEGFA-224ENST00000523873 SOCS7O14512 581 aa17.38■□□□□ 0.37
VEGFA-224ENST00000523873 IL2RBP14784 551 aa17.37■□□□□ 0.37
VEGFA-224ENST00000523873 PPP2R1AP30153 589 aa17.37■□□□□ 0.37
VEGFA-224ENST00000523873 EYA1Q99502 592 aa17.37■□□□□ 0.37
VEGFA-224ENST00000523873 PARD3Q8TEW0 1356 aa17.37■□□□□ 0.37
VEGFA-224ENST00000523873 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-224ENST00000523873 DDB1Q16531 1140 aa17.36■□□□□ 0.37
VEGFA-224ENST00000523873 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
VEGFA-224ENST00000523873 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
VEGFA-224ENST00000523873 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
VEGFA-224ENST00000523873 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
VEGFA-224ENST00000523873 CDCA7Q9BWT1 371 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-224ENST00000523873 IL13P35225 146 aa17.33■□□□□ 0.36
VEGFA-224ENST00000523873 TNS1Q9HBL0 1735 aaKnown RBP17.33■□□□□ 0.36
VEGFA-224ENST00000523873 IGSF1Q8N6C5 1336 aa17.32■□□□□ 0.36
VEGFA-224ENST00000523873 EXOC5O00471 708 aa17.32■□□□□ 0.36
VEGFA-224ENST00000523873 UPF1Q92900 1129 aaKnown RBP eCLIP17.32■□□□□ 0.36
VEGFA-224ENST00000523873 OVOS2A0A0G2JMS6 1433 aa17.31■□□□□ 0.36
VEGFA-224ENST00000523873 AEBP1Q8IUX7 1158 aa17.31■□□□□ 0.36
VEGFA-224ENST00000523873 MARCH10Q8NA82 808 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-224ENST00000523873 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
VEGFA-224ENST00000523873 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
VEGFA-224ENST00000523873 TATP17735 454 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms