RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 PRIMPOLQ96LW4 560 aa18.15■□□□□ 0.5
UBR5-207ENST00000520539 CDKL5O76039 1030 aa18.15■□□□□ 0.5
UBR5-207ENST00000520539 SPA17Q15506 151 aa18.15■□□□□ 0.5
UBR5-207ENST00000520539 KRT222Q8N1A0 295 aa18.15■□□□□ 0.5
UBR5-207ENST00000520539 CCDC97Q96F63 343 aaPredicted RBP18.15■□□□□ 0.5
UBR5-207ENST00000520539 RNF214Q8ND24 703 aa18.14■□□□□ 0.49
UBR5-207ENST00000520539 KRT18P05783 430 aaKnown RBP18.14■□□□□ 0.49
UBR5-207ENST00000520539 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
UBR5-207ENST00000520539 CASQ1P31415 396 aa18.14■□□□□ 0.49
UBR5-207ENST00000520539 KIF5BP33176 963 aa18.14■□□□□ 0.49
UBR5-207ENST00000520539 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
UBR5-207ENST00000520539 NEBLO76041 1014 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 KRT85P78386 507 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 CCDC50Q8IVM0 306 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 FSD2A1L4K1 749 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 CCDC110Q8TBZ0 833 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 SPC24Q8NBT2 197 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 CCDC174Q6PII3 467 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
UBR5-207ENST00000520539 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
UBR5-207ENST00000520539 PAXBP1Q9Y5B6 917 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 STK38Q15208 465 aa18.13■□□□□ 0.49
UBR5-207ENST00000520539 CNTROBQ8N137 903 aa18.12■□□□□ 0.49
UBR5-207ENST00000520539 FBF1Q8TES7 1133 aa18.12■□□□□ 0.49
UBR5-207ENST00000520539 DZIP1Q86YF9 867 aaKnown RBP18.12■□□□□ 0.49
UBR5-207ENST00000520539 API5Q9BZZ5 524 aaKnown RBP18.12■□□□□ 0.49
UBR5-207ENST00000520539 GSTTP1A0A1W2PQM5 241 aa18.12■□□□□ 0.49
UBR5-207ENST00000520539 GBP6Q6ZN66 633 aa18.12■□□□□ 0.49
UBR5-207ENST00000520539 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
UBR5-207ENST00000520539 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
UBR5-207ENST00000520539 STIM2Q9P246 746 aa18.11■□□□□ 0.49
UBR5-207ENST00000520539 TTC31Q49AM3 519 aaPredicted RBP18.11■□□□□ 0.49
UBR5-207ENST00000520539 LUC7L2Q9Y383 392 aaKnown RBP18.11■□□□□ 0.49
UBR5-207ENST00000520539 GSDMDP57764 484 aa18.11■□□□□ 0.49
UBR5-207ENST00000520539 FERMT1Q9BQL6 677 aa18.11■□□□□ 0.49
UBR5-207ENST00000520539 MRVI1Q9Y6F6 885 aa18.1■□□□□ 0.49
UBR5-207ENST00000520539 HSPA5P11021 654 aaKnown RBP18.1■□□□□ 0.49
UBR5-207ENST00000520539 HOMEZQ8IX15 550 aa18.1■□□□□ 0.49
UBR5-207ENST00000520539 CCDC160A6NGH7 325 aa18.1■□□□□ 0.49
UBR5-207ENST00000520539 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
UBR5-207ENST00000520539 TUBB4AP04350 444 aa18.1■□□□□ 0.49
UBR5-207ENST00000520539 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.492e-6■□□□□ 10.4
UBR5-207ENST00000520539 CLUAP1Q96AJ1 413 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 TRIM22Q8IYM9 498 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 IKBKGQ9Y6K9 419 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 RBM25P49756 843 aaKnown RBP18.09■□□□□ 0.49
UBR5-207ENST00000520539 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
UBR5-207ENST00000520539 FEZ2Q9UHY8 353 aaPredicted RBP18.09■□□□□ 0.49
UBR5-207ENST00000520539 TSNARE1Q96NA8 513 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 PPFIA2O75334 1257 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 TMEM132AQ24JP5 1023 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 RABGAP1Q9Y3P9 1069 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 CCDC171Q6TFL3 1326 aa18.09■□□□□ 0.49
UBR5-207ENST00000520539 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.49
UBR5-207ENST00000520539 A6NNZ2 444 aa18.08■□□□□ 0.48
UBR5-207ENST00000520539 TNNT1P13805 278 aa18.08■□□□□ 0.48
UBR5-207ENST00000520539 TUBB8Q3ZCM7 444 aa18.08■□□□□ 0.48
UBR5-207ENST00000520539 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.48
UBR5-207ENST00000520539 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
UBR5-207ENST00000520539 BCL2L13Q9BXK5 485 aa18.07■□□□□ 0.48
UBR5-207ENST00000520539 CCDC113Q9H0I3 377 aa18.07■□□□□ 0.48
UBR5-207ENST00000520539 MAP3K9P80192 1104 aa18.07■□□□□ 0.48
UBR5-207ENST00000520539 UBE4AQ14139 1066 aa18.07■□□□□ 0.48
UBR5-207ENST00000520539 CEP120Q8N960 986 aa18.07■□□□□ 0.48
UBR5-207ENST00000520539 VCX3BQ9H321 246 aa18.07■□□□□ 0.48
UBR5-207ENST00000520539 MAP4K4O95819 1239 aaPredicted RBP18.07■□□□□ 0.48
UBR5-207ENST00000520539 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
UBR5-207ENST00000520539 PPFIBP2Q8ND30 876 aa18.06■□□□□ 0.48
UBR5-207ENST00000520539 RAB3IL1Q8TBN0 382 aa18.06■□□□□ 0.48
UBR5-207ENST00000520539 HMGB3O15347 200 aaKnown RBP18.06■□□□□ 0.48
UBR5-207ENST00000520539 ZMAT2Q96NC0 199 aaKnown RBP18.06■□□□□ 0.48
UBR5-207ENST00000520539 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
UBR5-207ENST00000520539 ME1P48163 572 aa18.05■□□□□ 0.48
UBR5-207ENST00000520539 PLVAPQ9BX97 442 aa18.05■□□□□ 0.48
UBR5-207ENST00000520539 GOLIM4O00461 696 aa18.05■□□□□ 0.48
UBR5-207ENST00000520539 PAFAH1B1P43034 410 aa18.05■□□□□ 0.48
UBR5-207ENST00000520539 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
UBR5-207ENST00000520539 GTF2F1P35269 517 aaKnown RBP eCLIP18.04■□□□□ 0.482e-7■■■■■ 28.8
UBR5-207ENST00000520539 RPUSD2Q8IZ73 545 aaKnown RBP18.04■□□□□ 0.48
UBR5-207ENST00000520539 SCAPERQ9BY12 1400 aa18.04■□□□□ 0.48
UBR5-207ENST00000520539 CWC25Q9NXE8 425 aaPredicted RBP18.04■□□□□ 0.48
UBR5-207ENST00000520539 USO1O60763 962 aaKnown RBP18.04■□□□□ 0.48
UBR5-207ENST00000520539 KIF4AO95239 1232 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 CNGA1P29973 690 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 SLC4A3P48751 1232 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 CCDC121Q6ZUS5 278 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 SEPT10Q9P0V9 454 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 RAD21O60216 631 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 TUBBP07437 444 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 LMAN1P49257 510 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.03■□□□□ 0.48
UBR5-207ENST00000520539 NUP133Q8WUM0 1156 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 IFT74Q96LB3 600 aa18.03■□□□□ 0.48
UBR5-207ENST00000520539 CEP131Q9UPN4 1083 aa18.02■□□□□ 0.48
UBR5-207ENST00000520539 PABPN1LA6NDY0 278 aaKnown RBP18.02■□□□□ 0.48
UBR5-207ENST00000520539 FIBPO43427 364 aa18.02■□□□□ 0.48
UBR5-207ENST00000520539 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
UBR5-207ENST00000520539 MAP3K11Q16584 847 aa18.02■□□□□ 0.47
UBR5-207ENST00000520539 PPP4R3BQ5MIZ7 849 aa18.02■□□□□ 0.47
UBR5-207ENST00000520539 CASQ2O14958 399 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms