RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
TSNARE1-205ENST00000520166 U2AF1L5P0DN76 240 aaPredicted RBP22.73■■□□□ 1.23
TSNARE1-205ENST00000520166 U2AF1Q01081 240 aaKnown RBP eCLIP22.73■■□□□ 1.23
TSNARE1-205ENST00000520166 IP6K1Q92551 441 aa22.72■■□□□ 1.23
TSNARE1-205ENST00000520166 FLT4P35916 1363 aa22.72■■□□□ 1.23
TSNARE1-205ENST00000520166 KIAA0232Q92628 1395 aa22.71■■□□□ 1.23
TSNARE1-205ENST00000520166 HMOX1P09601 288 aa22.7■■□□□ 1.22
TSNARE1-205ENST00000520166 HSPA1LP34931 641 aa22.7■■□□□ 1.22
TSNARE1-205ENST00000520166 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
TSNARE1-205ENST00000520166 HAP1P54257 671 aaPredicted RBP22.69■■□□□ 1.22
TSNARE1-205ENST00000520166 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
TSNARE1-205ENST00000520166 ABCA3Q99758 1704 aa22.68■■□□□ 1.22
TSNARE1-205ENST00000520166 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
TSNARE1-205ENST00000520166 NUDCQ9Y266 331 aa22.67■■□□□ 1.22
TSNARE1-205ENST00000520166 FAM83GA6ND36 823 aa22.66■■□□□ 1.22
TSNARE1-205ENST00000520166 RGPD5Q99666 1765 aa22.66■■□□□ 1.22
TSNARE1-205ENST00000520166 NUTM2BA6NNL0 878 aaPredicted RBP22.65■■□□□ 1.22
TSNARE1-205ENST00000520166 NUTM2EB1AL46 878 aaPredicted RBP22.65■■□□□ 1.22
TSNARE1-205ENST00000520166 NUTM2AQ8IVF1 878 aaPredicted RBP22.65■■□□□ 1.22
TSNARE1-205ENST00000520166 EYA1Q99502 592 aa22.65■■□□□ 1.22
TSNARE1-205ENST00000520166 USHBP1Q8N6Y0 703 aa22.65■■□□□ 1.22
TSNARE1-205ENST00000520166 COL18A1P39060 1754 aa22.64■■□□□ 1.22
TSNARE1-205ENST00000520166 BLMP54132 1417 aaPredicted RBP22.64■■□□□ 1.22
TSNARE1-205ENST00000520166 PRDM11Q9NQV5 511 aa22.64■■□□□ 1.21
TSNARE1-205ENST00000520166 RTL1A6NKG5 1358 aa22.64■■□□□ 1.21
TSNARE1-205ENST00000520166 ANKRD24Q8TF21 1146 aa22.63■■□□□ 1.21
TSNARE1-205ENST00000520166 CPDO75976 1380 aa22.63■■□□□ 1.21
TSNARE1-205ENST00000520166 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
TSNARE1-205ENST00000520166 ADAMTS2O95450 1211 aa22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 NBPF6Q5VWK0 638 aa22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 SULT6B1Q6IMI4 303 aa22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 NBPF4Q96M43 638 aa22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 PLEKHF1Q96S99 279 aa22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 RSPH6AQ9H0K4 717 aa22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 COL22A1Q8NFW1 1626 aaPredicted RBP22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 APAF1O14727 1248 aa22.62■■□□□ 1.21
TSNARE1-205ENST00000520166 PHACTR3Q96KR7 559 aa22.61■■□□□ 1.21
TSNARE1-205ENST00000520166 RRP7AQ9Y3A4 280 aaKnown RBP22.6■■□□□ 1.21
TSNARE1-205ENST00000520166 RGPD2P0DJD1 1756 aa22.6■■□□□ 1.21
TSNARE1-205ENST00000520166 PRKAR2BP31323 418 aa22.6■■□□□ 1.21
TSNARE1-205ENST00000520166 RGPD1P0DJD0 1748 aa22.59■■□□□ 1.21
TSNARE1-205ENST00000520166 CAMTA1Q9Y6Y1 1673 aa22.59■■□□□ 1.21
TSNARE1-205ENST00000520166 RUNDC1Q96C34 613 aa22.58■■□□□ 1.21
TSNARE1-205ENST00000520166 IGSF1Q8N6C5 1336 aa22.57■■□□□ 1.2
TSNARE1-205ENST00000520166 FCHSD2O94868 740 aa22.57■■□□□ 1.2
TSNARE1-205ENST00000520166 ERBB3P21860 1342 aa22.57■■□□□ 1.2
TSNARE1-205ENST00000520166 NEUROD2Q15784 382 aa22.57■■□□□ 1.2
TSNARE1-205ENST00000520166 TCP11L2Q8N4U5 519 aa22.57■■□□□ 1.2
TSNARE1-205ENST00000520166 JCADQ9P266 1359 aa22.56■■□□□ 1.2
TSNARE1-205ENST00000520166 LMO7Q8WWI1 1683 aa22.54■■□□□ 1.2
TSNARE1-205ENST00000520166 STRN4Q9NRL3 753 aa22.54■■□□□ 1.2
TSNARE1-205ENST00000520166 BTG4Q9NY30 223 aa22.54■■□□□ 1.2
TSNARE1-205ENST00000520166 NLRP2Q9NX02 1062 aa22.53■■□□□ 1.2
TSNARE1-205ENST00000520166 CSB-PGBD3P0DP91 1061 aa22.52■■□□□ 1.2
TSNARE1-205ENST00000520166 LARP1Q6PKG0 1096 aaKnown RBP22.51■■□□□ 1.19
TSNARE1-205ENST00000520166 COL5A2P05997 1499 aaPredicted RBP22.5■■□□□ 1.19
TSNARE1-205ENST00000520166 LRP6O75581 1613 aa22.5■■□□□ 1.19
TSNARE1-205ENST00000520166 KDRP35968 1356 aa22.5■■□□□ 1.19
TSNARE1-205ENST00000520166 ZBED9Q6R2W3 1325 aa22.49■■□□□ 1.19
TSNARE1-205ENST00000520166 TMPOP42166 694 aaKnown RBP22.48■■□□□ 1.19
TSNARE1-205ENST00000520166 EVA1CP58658 441 aa22.48■■□□□ 1.19
TSNARE1-205ENST00000520166 MAPK8IP3Q9UPT6 1336 aa22.48■■□□□ 1.19
TSNARE1-205ENST00000520166 TOM1L2Q6ZVM7 507 aa22.46■■□□□ 1.19
TSNARE1-205ENST00000520166 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
TSNARE1-205ENST00000520166 C8orf37Q96NL8 207 aa22.46■■□□□ 1.19
TSNARE1-205ENST00000520166 WDR17Q8IZU2 1322 aa22.46■■□□□ 1.19
TSNARE1-205ENST00000520166 ABCC6O95255 1503 aa22.46■■□□□ 1.19
TSNARE1-205ENST00000520166 MTHFSDQ2M296 383 aaKnown RBP22.45■■□□□ 1.19
TSNARE1-205ENST00000520166 COL14A1Q05707 1796 aaKnown RBP22.45■■□□□ 1.18
TSNARE1-205ENST00000520166 RIPK4P57078 832 aa22.45■■□□□ 1.18
TSNARE1-205ENST00000520166 USP35Q9P2H5 1018 aa22.45■■□□□ 1.18
TSNARE1-205ENST00000520166 TRIM35Q9UPQ4 493 aa22.45■■□□□ 1.18
TSNARE1-205ENST00000520166 PNNQ9H307 717 aaKnown RBP22.43■■□□□ 1.18
TSNARE1-205ENST00000520166 SPINK5Q9NQ38 1064 aaPredicted RBP22.43■■□□□ 1.18
TSNARE1-205ENST00000520166 ZNF521Q96K83 1311 aa22.43■■□□□ 1.18
TSNARE1-205ENST00000520166 NCAPD2Q15021 1401 aa22.43■■□□□ 1.18
TSNARE1-205ENST00000520166 SPATA31A6Q5VVP1 1343 aa22.43■■□□□ 1.18
TSNARE1-205ENST00000520166 NFE2L2Q16236 605 aa22.43■■□□□ 1.18
TSNARE1-205ENST00000520166 WWC1Q8IX03 1113 aa22.43■■□□□ 1.18
TSNARE1-205ENST00000520166 FAM208AQ9UK61 1670 aaKnown RBP22.42■■□□□ 1.18
TSNARE1-205ENST00000520166 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
TSNARE1-205ENST00000520166 DCTN1Q14203 1278 aa22.41■■□□□ 1.18
TSNARE1-205ENST00000520166 NGLY1Q96IV0 654 aa22.41■■□□□ 1.18
TSNARE1-205ENST00000520166 PLCH1Q4KWH8 1693 aa22.41■■□□□ 1.18
TSNARE1-205ENST00000520166 PHF23Q9BUL5 403 aaPredicted RBP22.4■■□□□ 1.18
TSNARE1-205ENST00000520166 MEGF6O75095 1541 aa22.39■■□□□ 1.18
TSNARE1-205ENST00000520166 SLIT2O94813 1529 aa22.38■■□□□ 1.17
TSNARE1-205ENST00000520166 NEFMP07197 916 aa22.38■■□□□ 1.17
TSNARE1-205ENST00000520166 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
TSNARE1-205ENST00000520166 FBXO41Q8TF61 875 aa22.37■■□□□ 1.17
TSNARE1-205ENST00000520166 DLG5Q8TDM6 1919 aa22.36■■□□□ 1.17
TSNARE1-205ENST00000520166 BCL9LQ86UU0 1499 aa22.36■■□□□ 1.17
TSNARE1-205ENST00000520166 CRB1P82279 1406 aa22.36■■□□□ 1.17
TSNARE1-205ENST00000520166 MEX3CQ5U5Q3 659 aaKnown RBP22.36■■□□□ 1.17
TSNARE1-205ENST00000520166 MCM10Q7L590 875 aa22.36■■□□□ 1.17
TSNARE1-205ENST00000520166 NRAPQ86VF7 1730 aa22.36■■□□□ 1.17
TSNARE1-205ENST00000520166 RAPGEF4Q8WZA2 1011 aa22.35■■□□□ 1.17
TSNARE1-205ENST00000520166 CCDC27Q2M243 656 aa22.34■■□□□ 1.17
TSNARE1-205ENST00000520166 FNBP4Q8N3X1 1017 aaPredicted RBP22.34■■□□□ 1.17
TSNARE1-205ENST00000520166 TATP17735 454 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms