RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 SEPT12Q8IYM1 358 aa25.39■■□□□ 1.66
SREK1-207ENST00000520058 FAM98CQ17RN3 349 aaKnown RBP25.38■■□□□ 1.65
SREK1-207ENST00000520058 SPATA31A1Q5TZJ5 1347 aa25.37■■□□□ 1.65
SREK1-207ENST00000520058 NSD3Q9BZ95 1437 aa25.37■■□□□ 1.65
SREK1-207ENST00000520058 USP35Q9P2H5 1018 aa25.37■■□□□ 1.65
SREK1-207ENST00000520058 FYB1O15117 783 aa25.36■■□□□ 1.65
SREK1-207ENST00000520058 CSB-PGBD3P0DP91 1061 aa25.36■■□□□ 1.65
SREK1-207ENST00000520058 LARP1Q6PKG0 1096 aaKnown RBP25.36■■□□□ 1.65
SREK1-207ENST00000520058 CRB1P82279 1406 aa25.36■■□□□ 1.65
SREK1-207ENST00000520058 CGNL1Q0VF96 1302 aa25.36■■□□□ 1.65
SREK1-207ENST00000520058 TOM1L2Q6ZVM7 507 aa25.35■■□□□ 1.65
SREK1-207ENST00000520058 GGNBP2Q9H3C7 697 aa25.35■■□□□ 1.65
SREK1-207ENST00000520058 THRAP3Q9Y2W1 955 aaKnown RBP25.35■■□□□ 1.65
SREK1-207ENST00000520058 TCP11L2Q8N4U5 519 aa25.34■■□□□ 1.65
SREK1-207ENST00000520058 WDR17Q8IZU2 1322 aa25.33■■□□□ 1.64
SREK1-207ENST00000520058 BARGINQ6ZT62 677 aa25.32■■□□□ 1.64
SREK1-207ENST00000520058 CARD14Q9BXL6 1004 aa25.32■■□□□ 1.64
SREK1-207ENST00000520058 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
SREK1-207ENST00000520058 KRT27Q7Z3Y8 459 aa25.31■■□□□ 1.64
SREK1-207ENST00000520058 PANK3Q9H999 370 aa25.31■■□□□ 1.64
SREK1-207ENST00000520058 AXIN2Q9Y2T1 843 aa25.31■■□□□ 1.64
SREK1-207ENST00000520058 THSD7AQ9UPZ6 1657 aa25.3■■□□□ 1.64
SREK1-207ENST00000520058 AMPHP49418 695 aa25.3■■□□□ 1.64
SREK1-207ENST00000520058 FAM208AQ9UK61 1670 aaKnown RBP25.29■■□□□ 1.64
SREK1-207ENST00000520058 BLMP54132 1417 aaPredicted RBP25.29■■□□□ 1.64
SREK1-207ENST00000520058 C11orf95C9JLR9 678 aaPredicted RBP25.29■■□□□ 1.64
SREK1-207ENST00000520058 UPF1Q92900 1129 aaKnown RBP eCLIP25.29■■□□□ 1.64
SREK1-207ENST00000520058 KIF7Q2M1P5 1343 aa25.29■■□□□ 1.64
SREK1-207ENST00000520058 MAP2P11137 1827 aaKnown RBP25.28■■□□□ 1.64
SREK1-207ENST00000520058 IP6K1Q92551 441 aa25.27■■□□□ 1.64
SREK1-207ENST00000520058 WNK3Q9BYP7 1800 aa25.26■■□□□ 1.63
SREK1-207ENST00000520058 CCDC125Q86Z20 511 aa25.26■■□□□ 1.63
SREK1-207ENST00000520058 CDCA7Q9BWT1 371 aaPredicted RBP25.26■■□□□ 1.63
SREK1-207ENST00000520058 KNSTRNQ9Y448 316 aa25.26■■□□□ 1.63
SREK1-207ENST00000520058 PARP4Q9UKK3 1724 aaKnown RBP25.25■■□□□ 1.63
SREK1-207ENST00000520058 RTL1A6NKG5 1358 aa25.24■■□□□ 1.63
SREK1-207ENST00000520058 CCDC7Q96M83 1385 aa25.24■■□□□ 1.63
SREK1-207ENST00000520058 ERBB3P21860 1342 aa25.24■■□□□ 1.63
SREK1-207ENST00000520058 PDE3BQ13370 1112 aa25.24■■□□□ 1.63
SREK1-207ENST00000520058 CARD10Q9BWT7 1032 aa25.24■■□□□ 1.63
SREK1-207ENST00000520058 NSD2O96028 1365 aa25.23■■□□□ 1.63
SREK1-207ENST00000520058 MAP3K19Q56UN5 1328 aa25.23■■□□□ 1.63
SREK1-207ENST00000520058 KIF24Q5T7B8 1368 aa25.22■■□□□ 1.63
SREK1-207ENST00000520058 ANKRD24Q8TF21 1146 aa25.22■■□□□ 1.63
SREK1-207ENST00000520058 NLRP2Q9NX02 1062 aa25.22■■□□□ 1.63
SREK1-207ENST00000520058 HOXC9P31274 260 aa25.21■■□□□ 1.63
SREK1-207ENST00000520058 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
SREK1-207ENST00000520058 SMG6Q86US8 1419 aaKnown RBP25.2■■□□□ 1.63
SREK1-207ENST00000520058 RRS1Q15050 365 aaKnown RBP25.2■■□□□ 1.62
SREK1-207ENST00000520058 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
SREK1-207ENST00000520058 LTV1Q96GA3 475 aaPredicted RBP25.18■■□□□ 1.62
SREK1-207ENST00000520058 FLT4P35916 1363 aa25.18■■□□□ 1.62
SREK1-207ENST00000520058 DDB1Q16531 1140 aa25.17■■□□□ 1.62
SREK1-207ENST00000520058 FBLN1P23142 703 aa25.16■■□□□ 1.62
SREK1-207ENST00000520058 FAM196AQ6ZSG2 479 aa25.16■■□□□ 1.62
SREK1-207ENST00000520058 RGPD1P0DJD0 1748 aa25.15■■□□□ 1.62
SREK1-207ENST00000520058 LRRC37A3O60309 1634 aa25.15■■□□□ 1.62
SREK1-207ENST00000520058 WASHC2AQ641Q2 1341 aa25.14■■□□□ 1.62
SREK1-207ENST00000520058 RGPD2P0DJD1 1756 aa25.14■■□□□ 1.62
SREK1-207ENST00000520058 PPM1GO15355 546 aaPredicted RBP25.14■■□□□ 1.62
SREK1-207ENST00000520058 MORC1Q86VD1 984 aa25.14■■□□□ 1.62
SREK1-207ENST00000520058 EXOC5O00471 708 aa25.12■■□□□ 1.61
SREK1-207ENST00000520058 INSRP06213 1382 aa25.12■■□□□ 1.61
SREK1-207ENST00000520058 IL2RBP14784 551 aa25.11■■□□□ 1.61
SREK1-207ENST00000520058 TNNT2P45379 298 aaPredicted RBP25.11■■□□□ 1.61
SREK1-207ENST00000520058 PEAK1Q9H792 1746 aa25.11■■□□□ 1.61
SREK1-207ENST00000520058 EP400Q96L91 3159 aa25.09■■□□□ 1.61
SREK1-207ENST00000520058 EMILIN1Q9Y6C2 1016 aa25.09■■□□□ 1.61
SREK1-207ENST00000520058 KAT6BQ8WYB5 2073 aa25.09■■□□□ 1.61
SREK1-207ENST00000520058 FAM182BQ5T319 152 aa25.08■■□□□ 1.61
SREK1-207ENST00000520058 OVOS2A0A0G2JMS6 1433 aa25.07■■□□□ 1.6
SREK1-207ENST00000520058 DISP2A7MBM2 1401 aa25.07■■□□□ 1.6
SREK1-207ENST00000520058 HSP90AB2PQ58FF8 381 aa25.07■■□□□ 1.6
SREK1-207ENST00000520058 BAG6P46379 1132 aa25.05■■□□□ 1.6
SREK1-207ENST00000520058 AMER1Q5JTC6 1135 aaPredicted RBP25.05■■□□□ 1.6
SREK1-207ENST00000520058 POLKQ9UBT6 870 aa25.05■■□□□ 1.6
SREK1-207ENST00000520058 SBF2Q86WG5 1849 aa25.05■■□□□ 1.6
SREK1-207ENST00000520058 PER1O15534 1290 aaPredicted RBP25.04■■□□□ 1.6
SREK1-207ENST00000520058 TNS2Q63HR2 1409 aa25.03■■□□□ 1.6
SREK1-207ENST00000520058 RAPGEF4Q8WZA2 1011 aa25.02■■□□□ 1.6
SREK1-207ENST00000520058 TNS1Q9HBL0 1735 aaKnown RBP25.01■■□□□ 1.59
SREK1-207ENST00000520058 CC2D1BQ5T0F9 858 aaKnown RBP25.01■■□□□ 1.59
SREK1-207ENST00000520058 NBPF6Q5VWK0 638 aa25.01■■□□□ 1.59
SREK1-207ENST00000520058 NBPF4Q96M43 638 aa25.01■■□□□ 1.59
SREK1-207ENST00000520058 NPC1L1Q9UHC9 1359 aa25.01■■□□□ 1.59
SREK1-207ENST00000520058 TRIM37O94972 964 aa25■■□□□ 1.59
SREK1-207ENST00000520058 TATP17735 454 aaPredicted RBP24.97■■□□□ 1.59
SREK1-207ENST00000520058 MARCH10Q8NA82 808 aaPredicted RBP24.97■■□□□ 1.59
SREK1-207ENST00000520058 BCL9O00512 1426 aa24.96■■□□□ 1.59
SREK1-207ENST00000520058 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.58
SREK1-207ENST00000520058 APBA3O96018 575 aa24.94■■□□□ 1.58
SREK1-207ENST00000520058 DEFB132Q7Z7B7 95 aa24.94■■□□□ 1.58
SREK1-207ENST00000520058 ZCRB1Q8TBF4 217 aaKnown RBP24.94■■□□□ 1.58
SREK1-207ENST00000520058 CNGB1Q14028 1251 aaPredicted RBP24.93■■□□□ 1.58
SREK1-207ENST00000520058 EIF4A2Q14240 407 aaKnown RBP24.92■■□□□ 1.58
SREK1-207ENST00000520058 DDX54Q8TDD1 881 aaKnown RBP24.92■■□□□ 1.58
SREK1-207ENST00000520058 BCL11BQ9C0K0 894 aaPredicted RBP24.91■■□□□ 1.58
SREK1-207ENST00000520058 PARD3Q8TEW0 1356 aa24.91■■□□□ 1.58
SREK1-207ENST00000520058 MEGF6O75095 1541 aa24.91■■□□□ 1.58
SREK1-207ENST00000520058 EYA1Q99502 592 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms