RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 AXIN1O15169 862 aa7.98□□□□□ -1.13
SKP1-205ENST00000519054 RAD21O60216 631 aa7.98□□□□□ -1.13
SKP1-205ENST00000519054 VAC14Q08AM6 782 aa7.98□□□□□ -1.13
SKP1-205ENST00000519054 CTC1Q2NKJ3 1217 aa7.98□□□□□ -1.13
SKP1-205ENST00000519054 WDR4P57081 412 aaKnown RBP7.97□□□□□ -1.13
SKP1-205ENST00000519054 RAB15P59190 212 aa7.97□□□□□ -1.13
SKP1-205ENST00000519054 NBPF20Q3BBV1 942 aa7.97□□□□□ -1.13
SKP1-205ENST00000519054 CRIPAKQ8N1N5 446 aa7.97□□□□□ -1.13
SKP1-205ENST00000519054 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
SKP1-205ENST00000519054 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
SKP1-205ENST00000519054 CAPN5O15484 640 aaPredicted RBP7.95□□□□□ -1.14
SKP1-205ENST00000519054 ZIC2O95409 532 aaPredicted RBP7.95□□□□□ -1.14
SKP1-205ENST00000519054 TIMP2P16035 220 aa7.95□□□□□ -1.14
SKP1-205ENST00000519054 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
SKP1-205ENST00000519054 INTS6LQ5JSJ4 861 aaKnown RBP7.95□□□□□ -1.14
SKP1-205ENST00000519054 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
SKP1-205ENST00000519054 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
SKP1-205ENST00000519054 KLF16Q9BXK1 252 aaPredicted RBP7.95□□□□□ -1.14
SKP1-205ENST00000519054 DACH1Q9UI36 760 aa7.95□□□□□ -1.14
SKP1-205ENST00000519054 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
SKP1-205ENST00000519054 WASHC4Q2M389 1173 aa7.94□□□□□ -1.14
SKP1-205ENST00000519054 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
SKP1-205ENST00000519054 EIF4G2P78344 907 aaKnown RBP eCLIP7.93□□□□□ -1.14
SKP1-205ENST00000519054 PPP1R26Q5T8A7 1209 aaPredicted RBP7.93□□□□□ -1.14
SKP1-205ENST00000519054 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
SKP1-205ENST00000519054 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
SKP1-205ENST00000519054 ESPNB1AK53 854 aa7.92□□□□□ -1.14
SKP1-205ENST00000519054 BMP1P13497 986 aa7.92□□□□□ -1.14
SKP1-205ENST00000519054 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
SKP1-205ENST00000519054 DHX9Q08211 1270 aaKnown RBP7.92□□□□□ -1.14
SKP1-205ENST00000519054 EMILIN1Q9Y6C2 1016 aa7.92□□□□□ -1.14
SKP1-205ENST00000519054 ERVH48-1M5A8F1 160 aa7.91□□□□□ -1.14
SKP1-205ENST00000519054 ZNF592Q92610 1267 aa7.91□□□□□ -1.14
SKP1-205ENST00000519054 ATP13A2Q9NQ11 1180 aa7.91□□□□□ -1.14
SKP1-205ENST00000519054 TMPRSS4Q9NRS4 437 aa7.91□□□□□ -1.14
SKP1-205ENST00000519054 SEPT12Q8IYM1 358 aa7.9□□□□□ -1.14
SKP1-205ENST00000519054 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.14
SKP1-205ENST00000519054 CEP126Q9P2H0 1117 aa7.9□□□□□ -1.14
SKP1-205ENST00000519054 SEMA3FQ13275 785 aa7.89□□□□□ -1.15
SKP1-205ENST00000519054 PROSER2Q86WR7 435 aaPredicted RBP7.89□□□□□ -1.15
SKP1-205ENST00000519054 POM121CA8CG34 1229 aa7.88□□□□□ -1.15
SKP1-205ENST00000519054 POTECB2RU33 542 aa7.88□□□□□ -1.15
SKP1-205ENST00000519054 CBLBQ13191 982 aa7.88□□□□□ -1.15
SKP1-205ENST00000519054 RNF20Q5VTR2 975 aa7.88□□□□□ -1.15
SKP1-205ENST00000519054 TRIM46Q7Z4K8 759 aa7.88□□□□□ -1.15
SKP1-205ENST00000519054 ZNF784Q8NCA9 323 aaPredicted RBP7.88□□□□□ -1.15
SKP1-205ENST00000519054 GMPR2Q9P2T1 348 aaKnown RBP7.88□□□□□ -1.15
SKP1-205ENST00000519054 CYLDQ9NQC7 956 aa7.87□□□□□ -1.15
SKP1-205ENST00000519054 SOX11P35716 441 aa7.86□□□□□ -1.15
SKP1-205ENST00000519054 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
SKP1-205ENST00000519054 MRPL14Q6P1L8 145 aaKnown RBP7.86□□□□□ -1.15
SKP1-205ENST00000519054 FNBP4Q8N3X1 1017 aaPredicted RBP7.86□□□□□ -1.15
SKP1-205ENST00000519054 MEIOBQ8N635 442 aa7.86□□□□□ -1.15
SKP1-205ENST00000519054 PURBQ96QR8 312 aaKnown RBP7.86□□□□□ -1.15
SKP1-205ENST00000519054 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
SKP1-205ENST00000519054 A6NJR5 290 aa7.85□□□□□ -1.15
SKP1-205ENST00000519054 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
SKP1-205ENST00000519054 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
SKP1-205ENST00000519054 CCDC85AQ96PX6 553 aaPredicted RBP7.85□□□□□ -1.15
SKP1-205ENST00000519054 LILRA1O75019 489 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 UPP2O95045 317 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
SKP1-205ENST00000519054 SCARF1Q14162 830 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 Q6ZVU0 165 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 RNF135Q8IUD6 432 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 ZFP42Q96MM3 310 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 ALG2Q9H553 416 aa7.84□□□□□ -1.15
SKP1-205ENST00000519054 C11orf95C9JLR9 678 aaPredicted RBP7.83□□□□□ -1.16
SKP1-205ENST00000519054 BMP2P12643 396 aa7.83□□□□□ -1.16
SKP1-205ENST00000519054 TSGA10IPQ3SY00 556 aa7.83□□□□□ -1.16
SKP1-205ENST00000519054 CCDC125Q86Z20 511 aa7.83□□□□□ -1.16
SKP1-205ENST00000519054 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
SKP1-205ENST00000519054 ADAMTS19Q8TE59 1207 aa7.83□□□□□ -1.16
SKP1-205ENST00000519054 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
SKP1-205ENST00000519054 PIK3CDO00329 1044 aa7.82□□□□□ -1.16
SKP1-205ENST00000519054 SCTRP47872 440 aa7.82□□□□□ -1.16
SKP1-205ENST00000519054 RELBQ01201 579 aa7.82□□□□□ -1.16
SKP1-205ENST00000519054 HDGFL1Q5TGJ6 251 aa7.82□□□□□ -1.16
SKP1-205ENST00000519054 TRIM47Q96LD4 638 aa7.82□□□□□ -1.16
SKP1-205ENST00000519054 TSEN34Q9BSV6 310 aaKnown RBP7.82□□□□□ -1.16
SKP1-205ENST00000519054 CDCA7Q9BWT1 371 aaPredicted RBP7.82□□□□□ -1.16
SKP1-205ENST00000519054 DOLKQ9UPQ8 538 aa7.82□□□□□ -1.16
SKP1-205ENST00000519054 ADH1AP07327 375 aa7.81□□□□□ -1.16
SKP1-205ENST00000519054 SNRPBP14678 240 aaKnown RBP7.81□□□□□ -1.16
SKP1-205ENST00000519054 ERVK-9P63128 1117 aa7.81□□□□□ -1.16
SKP1-205ENST00000519054 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
SKP1-205ENST00000519054 TRIM52Q96A61 297 aa7.81□□□□□ -1.16
SKP1-205ENST00000519054 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
SKP1-205ENST00000519054 ESF1Q9H501 851 aaKnown RBP7.8□□□□□ -1.16
SKP1-205ENST00000519054 TRAK2O60296 914 aa7.79□□□□□ -1.16
SKP1-205ENST00000519054 OXLD1Q5BKU9 147 aa7.79□□□□□ -1.16
SKP1-205ENST00000519054 PLPP7Q8NBV4 271 aa7.79□□□□□ -1.16
SKP1-205ENST00000519054 GLMNQ92990 594 aa7.79□□□□□ -1.16
SKP1-205ENST00000519054 ZNF395Q9H8N7 513 aaPredicted RBP7.79□□□□□ -1.16
SKP1-205ENST00000519054 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
SKP1-205ENST00000519054 MYCP01106 439 aaPredicted RBP7.78□□□□□ -1.16
SKP1-205ENST00000519054 SKIP12755 728 aa7.78□□□□□ -1.16
SKP1-205ENST00000519054 KDF1Q8NAX2 398 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms