RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 CRB1P82279 1406 aa17.22■□□□□ 0.35
MRPS28-202ENST00000518271 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
MRPS28-202ENST00000518271 BARGINQ6ZT62 677 aa17.21■□□□□ 0.35
MRPS28-202ENST00000518271 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
MRPS28-202ENST00000518271 SBF2Q86WG5 1849 aa17.21■□□□□ 0.35
MRPS28-202ENST00000518271 A0A0G2JS52 829 aa17.2■□□□□ 0.34
MRPS28-202ENST00000518271 MYT1Q01538 1121 aa17.2■□□□□ 0.34
MRPS28-202ENST00000518271 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
MRPS28-202ENST00000518271 TERF2IPQ9NYB0 399 aa17.2■□□□□ 0.34
MRPS28-202ENST00000518271 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
MRPS28-202ENST00000518271 SOX12O15370 315 aa17.19■□□□□ 0.34
MRPS28-202ENST00000518271 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
MRPS28-202ENST00000518271 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
MRPS28-202ENST00000518271 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
MRPS28-202ENST00000518271 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
MRPS28-202ENST00000518271 EVA1CP58658 441 aa17.18■□□□□ 0.34
MRPS28-202ENST00000518271 TMF1P82094 1093 aa17.18■□□□□ 0.34
MRPS28-202ENST00000518271 TCP11L2Q8N4U5 519 aa17.18■□□□□ 0.34
MRPS28-202ENST00000518271 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
MRPS28-202ENST00000518271 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
MRPS28-202ENST00000518271 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
MRPS28-202ENST00000518271 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
MRPS28-202ENST00000518271 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
MRPS28-202ENST00000518271 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
MRPS28-202ENST00000518271 THRAP3Q9Y2W1 955 aaKnown RBP17.15■□□□□ 0.34
MRPS28-202ENST00000518271 RREB1Q92766 1687 aa17.14■□□□□ 0.33
MRPS28-202ENST00000518271 ERBB3P21860 1342 aa17.12■□□□□ 0.33
MRPS28-202ENST00000518271 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
MRPS28-202ENST00000518271 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
MRPS28-202ENST00000518271 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
MRPS28-202ENST00000518271 CARD10Q9BWT7 1032 aa17.1■□□□□ 0.33
MRPS28-202ENST00000518271 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
MRPS28-202ENST00000518271 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
MRPS28-202ENST00000518271 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
MRPS28-202ENST00000518271 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
MRPS28-202ENST00000518271 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
MRPS28-202ENST00000518271 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
MRPS28-202ENST00000518271 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
MRPS28-202ENST00000518271 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
MRPS28-202ENST00000518271 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
MRPS28-202ENST00000518271 FYB1O15117 783 aa17.08■□□□□ 0.32
MRPS28-202ENST00000518271 FBLN1P23142 703 aa17.08■□□□□ 0.32
MRPS28-202ENST00000518271 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
MRPS28-202ENST00000518271 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
MRPS28-202ENST00000518271 FAM196AQ6ZSG2 479 aa17.07■□□□□ 0.32
MRPS28-202ENST00000518271 COG3Q96JB2 828 aa17.07■□□□□ 0.32
MRPS28-202ENST00000518271 TRIM37O94972 964 aa17.06■□□□□ 0.32
MRPS28-202ENST00000518271 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
MRPS28-202ENST00000518271 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
MRPS28-202ENST00000518271 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
MRPS28-202ENST00000518271 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
MRPS28-202ENST00000518271 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
MRPS28-202ENST00000518271 BAG6P46379 1132 aa17.05■□□□□ 0.32
MRPS28-202ENST00000518271 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.32
MRPS28-202ENST00000518271 ANKRD24Q8TF21 1146 aa17.05■□□□□ 0.32
MRPS28-202ENST00000518271 IP6K1Q92551 441 aa17.05■□□□□ 0.32
MRPS28-202ENST00000518271 BCL9O00512 1426 aa17.04■□□□□ 0.32
MRPS28-202ENST00000518271 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
MRPS28-202ENST00000518271 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
MRPS28-202ENST00000518271 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
MRPS28-202ENST00000518271 DDB1Q16531 1140 aa17.04■□□□□ 0.32
MRPS28-202ENST00000518271 HOXC9P31274 260 aa17.03■□□□□ 0.32
MRPS28-202ENST00000518271 MARCH10Q8NA82 808 aaPredicted RBP17.03■□□□□ 0.32
MRPS28-202ENST00000518271 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
MRPS28-202ENST00000518271 C11orf95C9JLR9 678 aaPredicted RBP17.01■□□□□ 0.31
MRPS28-202ENST00000518271 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
MRPS28-202ENST00000518271 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
MRPS28-202ENST00000518271 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
MRPS28-202ENST00000518271 EZH2Q15910 746 aaKnown RBP17■□□□□ 0.31
MRPS28-202ENST00000518271 PTF1AQ7RTS3 328 aa17■□□□□ 0.31
MRPS28-202ENST00000518271 LRP5O75197 1615 aa16.99■□□□□ 0.31
MRPS28-202ENST00000518271 BTAF1O14981 1849 aa16.99■□□□□ 0.31
MRPS28-202ENST00000518271 MEGF6O75095 1541 aa16.99■□□□□ 0.31
MRPS28-202ENST00000518271 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
MRPS28-202ENST00000518271 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
MRPS28-202ENST00000518271 DOT1LQ8TEK3 1739 aa16.97■□□□□ 0.31
MRPS28-202ENST00000518271 APBA3O96018 575 aa16.97■□□□□ 0.31
MRPS28-202ENST00000518271 LTV1Q96GA3 475 aaPredicted RBP16.97■□□□□ 0.31
MRPS28-202ENST00000518271 IL2RBP14784 551 aa16.96■□□□□ 0.31
MRPS28-202ENST00000518271 AMPHP49418 695 aa16.96■□□□□ 0.31
MRPS28-202ENST00000518271 FLT4P35916 1363 aa16.96■□□□□ 0.31
MRPS28-202ENST00000518271 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
MRPS28-202ENST00000518271 INSRP06213 1382 aa16.95■□□□□ 0.3
MRPS28-202ENST00000518271 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
MRPS28-202ENST00000518271 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
MRPS28-202ENST00000518271 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
MRPS28-202ENST00000518271 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
MRPS28-202ENST00000518271 EXOC5O00471 708 aa16.94■□□□□ 0.3
MRPS28-202ENST00000518271 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
MRPS28-202ENST00000518271 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
MRPS28-202ENST00000518271 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
MRPS28-202ENST00000518271 NBPF6Q5VWK0 638 aa16.93■□□□□ 0.3
MRPS28-202ENST00000518271 NBPF4Q96M43 638 aa16.93■□□□□ 0.3
MRPS28-202ENST00000518271 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
MRPS28-202ENST00000518271 PANK3Q9H999 370 aa16.92■□□□□ 0.3
MRPS28-202ENST00000518271 KIF7Q2M1P5 1343 aa16.92■□□□□ 0.3
MRPS28-202ENST00000518271 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
MRPS28-202ENST00000518271 TOGARAM1Q9Y4F4 1720 aa16.91■□□□□ 0.3
MRPS28-202ENST00000518271 SMG6Q86US8 1419 aaKnown RBP16.91■□□□□ 0.3
MRPS28-202ENST00000518271 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms