RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 DEF6Q9H4E7 631 aa14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 PDCL2Q8N4E4 241 aa14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 NEUROD6Q96NK8 337 aa14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 CAMSAP2Q08AD1 1489 aa14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 AMOTQ4VCS5 1084 aa14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 PPP1R1BQ9UD71 204 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 CEP89Q96ST8 783 aa14.66□□□□□ -0.06
PCDHGA6-201ENST00000517434 CAVIN1Q6NZI2 390 aaKnown RBP14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 ZSCAN30Q86W11 494 aa14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 FAM135AQ9P2D6 1515 aa14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 HDGFL1Q5TGJ6 251 aa14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 RALYLQ86SE5 291 aaKnown RBP14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 LETM1O95202 739 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 TCP11L2Q8N4U5 519 aa14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 BICD2Q8TD16 824 aa14.65□□□□□ -0.06
PCDHGA6-201ENST00000517434 ASXL2Q76L83 1435 aa14.64□□□□□ -0.07
PCDHGA6-201ENST00000517434 CCAR1Q8IX12 1150 aaKnown RBP14.64□□□□□ -0.07
PCDHGA6-201ENST00000517434 CCDC43Q96MW1 224 aaKnown RBP14.64□□□□□ -0.07
PCDHGA6-201ENST00000517434 HIP1O00291 1037 aa14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 ZC3H6P61129 1189 aaKnown RBP14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 DCTN1Q14203 1278 aa14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 NBPF1Q3BBV0 1214 aa14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 PPP2R1AP30153 589 aa14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 PES1O00541 588 aaKnown RBP14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 SART3Q15020 963 aaKnown RBP14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 CCDC27Q2M243 656 aa14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 TSPY26PQ9H489 355 aa14.63□□□□□ -0.07
PCDHGA6-201ENST00000517434 IDI1Q13907 227 aa14.62□□□□□ -0.07
PCDHGA6-201ENST00000517434 NINLQ9Y2I6 1382 aa14.62□□□□□ -0.07
PCDHGA6-201ENST00000517434 FCHSD2O94868 740 aa14.62□□□□□ -0.07
PCDHGA6-201ENST00000517434 CCDC112Q8NEF3 446 aa14.62□□□□□ -0.07
PCDHGA6-201ENST00000517434 SAFBQ15424 915 aaKnown RBP eCLIP14.62□□□□□ -0.07
PCDHGA6-201ENST00000517434 NFXL1Q6ZNB6 911 aa14.62□□□□□ -0.07
PCDHGA6-201ENST00000517434 CNNM1Q9NRU3 951 aa14.62□□□□□ -0.07
PCDHGA6-201ENST00000517434 UBAP1LF5GYI3 381 aa14.61□□□□□ -0.07
PCDHGA6-201ENST00000517434 WASHC4Q2M389 1173 aa14.61□□□□□ -0.07
PCDHGA6-201ENST00000517434 NBPF8Q3BBV2 869 aa14.61□□□□□ -0.07
PCDHGA6-201ENST00000517434 CCT4P50991 539 aaKnown RBP14.61□□□□□ -0.07
PCDHGA6-201ENST00000517434 WDHD1O75717 1129 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA6-201ENST00000517434 CEBPAP49715 358 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA6-201ENST00000517434 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 PLCH2O75038 1416 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 XBP1P17861 261 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 TWISTNBQ3B726 338 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 HSP90AB3PQ58FF7 597 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 CCDC158Q5M9N0 1113 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 MPHOSPH8Q99549 860 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 ANKRD20A12PQ8NF67 263 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 EXOC5O00471 708 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 MCM4P33991 863 aa14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 INTS3Q68E01 1043 aaKnown RBP14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.6□□□□□ -0.07
PCDHGA6-201ENST00000517434 ABCC5O15440 1437 aa14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 CCP110O43303 1012 aa14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 TRIM5Q9C035 493 aa14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 CALCOCO1Q9P1Z2 691 aa14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 HOOK1Q9UJC3 728 aaKnown RBP14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 UHRF1BP1LA0JNW5 1464 aa14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 ZNF518AQ6AHZ1 1483 aa14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 SMC3Q9UQE7 1217 aa14.59□□□□□ -0.07
PCDHGA6-201ENST00000517434 BRMS1Q9HCU9 246 aa14.58□□□□□ -0.07
PCDHGA6-201ENST00000517434 NPHP3Q7Z494 1330 aa14.58□□□□□ -0.07
PCDHGA6-201ENST00000517434 WDR7Q9Y4E6 1490 aa14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 FAM177BA6PVY3 158 aa14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 TEX13AQ9BXU3 409 aaPredicted RBP14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 CCDC73Q6ZRK6 1079 aa14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 SRCIN1Q9C0H9 1055 aa14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 ZPR1O75312 459 aa14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 MAPK8IP2Q13387 824 aaPredicted RBP14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 ANO2Q9NQ90 1003 aa14.58□□□□□ -0.08
PCDHGA6-201ENST00000517434 ADAMTS2O95450 1211 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 ZSCAN25Q6NSZ9 544 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 WDR63Q8IWG1 891 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 FOXO3O43524 673 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 FBXO31Q5XUX0 539 aaPredicted RBP14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 CNTROBQ8N137 903 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 CCDC57Q2TAC2 916 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 NAT10Q9H0A0 1025 aaKnown RBP14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 PTPRKQ15262 1439 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 GNAI2P04899 355 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 TMOD2Q9NZR1 351 aa14.57□□□□□ -0.08
PCDHGA6-201ENST00000517434 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 BTBD11A6QL63 1104 aa14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 GNAT3A8MTJ3 354 aa14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 SURF6O75683 361 aaKnown RBP14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 BCL11BQ9C0K0 894 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 PSMA5P28066 241 aa14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 NACAP1Q9BZK3 213 aa14.56□□□□□ -0.08
PCDHGA6-201ENST00000517434 NCOA1Q15788 1441 aa14.55□□□□□ -0.08
PCDHGA6-201ENST00000517434 PRPF40AO75400 957 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms