RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 POLKQ9UBT6 870 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 TRPC5Q9UL62 973 aaPredicted RBP7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 EMILIN1Q9Y6C2 1016 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 SLIT3O75094 1523 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 RTL1A6NKG5 1358 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 FLT4P35916 1363 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 KIF24Q5T7B8 1368 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 DIAPH1O60610 1272 aaKnown RBP7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 FBLN1P23142 703 aa7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 PPP2R1AP30153 589 aa7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 HOXC9P31274 260 aa7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 WDR43Q15061 677 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 PRKRIP1Q9H875 184 aaPredicted RBP7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 QTRT2Q9H974 415 aaKnown RBP7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 USP35Q9P2H5 1018 aa7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 PHRF1Q9P1Y6 1649 aaKnown RBP7.29□□□□□ -1.24
SCARNA16.4-201ENST00000516956 BLMP54132 1417 aaPredicted RBP7.28□□□□□ -1.24
SCARNA16.4-201ENST00000516956 ANKRD26Q9UPS8 1709 aa7.28□□□□□ -1.24
SCARNA16.4-201ENST00000516956 HSP90AB2PQ58FF8 381 aa7.28□□□□□ -1.24
SCARNA16.4-201ENST00000516956 FNBP4Q8N3X1 1017 aaPredicted RBP7.28□□□□□ -1.24
SCARNA16.4-201ENST00000516956 PNNQ9H307 717 aaKnown RBP7.28□□□□□ -1.24
SCARNA16.4-201ENST00000516956 COL14A1Q05707 1796 aaKnown RBP7.28□□□□□ -1.24
SCARNA16.4-201ENST00000516956 LRP6O75581 1613 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 RXRBP28702 533 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 RAPGEF4Q8WZA2 1011 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 INSRP06213 1382 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 PARD3Q8TEW0 1356 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 USP54Q70EL1 1684 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 NFAT5O94916 1531 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 WDR17Q8IZU2 1322 aa7.27□□□□□ -1.25
SCARNA16.4-201ENST00000516956 U2AF1L5P0DN76 240 aaPredicted RBP7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 TATP17735 454 aaPredicted RBP7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 RBM6P78332 1123 aaKnown RBP7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 U2AF1Q01081 240 aaKnown RBP eCLIP7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 VPS72Q15906 364 aa7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 LARP1Q6PKG0 1096 aaKnown RBP7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 TCP11L2Q8N4U5 519 aa7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 MRS2Q9HD23 443 aa7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 AXIN2Q9Y2T1 843 aa7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 ABCA3Q99758 1704 aa7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 ABCC6O95255 1503 aa7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 ERBB3P21860 1342 aa7.26□□□□□ -1.25
SCARNA16.4-201ENST00000516956 CDK12Q9NYV4 1490 aaPredicted RBP7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 PDE3BQ13370 1112 aa7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 EIF4A2Q14240 407 aaKnown RBP7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 GJD4Q96KN9 370 aaPredicted RBP7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 CDCA7Q9BWT1 371 aaPredicted RBP7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 THRAP3Q9Y2W1 955 aaKnown RBP7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 LTN1O94822 1766 aa7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 CRB1P82279 1406 aa7.25□□□□□ -1.25
SCARNA16.4-201ENST00000516956 MARF1Q9Y4F3 1742 aaKnown RBP7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 SLIT2O94813 1529 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 EXOC5O00471 708 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 IL2RBP14784 551 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 FAM98CQ17RN3 349 aaKnown RBP7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 SPATA31A1Q5TZJ5 1347 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 SPATA31A5Q5VU36 1347 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 SPATA31A7Q8IWB4 1347 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 MAPK8IP3Q9UPT6 1336 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 CRYBG1Q9Y4K1 1723 aa7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 COL5A2P05997 1499 aaPredicted RBP7.24□□□□□ -1.25
SCARNA16.4-201ENST00000516956 PLCH1Q4KWH8 1693 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 CAMTA1Q9Y6Y1 1673 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 MAP2P11137 1827 aaKnown RBP7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 HMOX1P09601 288 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 PLEKHO1Q53GL0 409 aaPredicted RBP7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 NBPF6Q5VWK0 638 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 SULT6B1Q6IMI4 303 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 USHBP1Q8N6Y0 703 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 NBPF4Q96M43 638 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 EYA1Q99502 592 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 NWD2Q9ULI1 1742 aa7.23□□□□□ -1.25
SCARNA16.4-201ENST00000516956 ATRNO75882 1429 aa7.22□□□□□ -1.25
SCARNA16.4-201ENST00000516956 CCER2I3L3R5 266 aa7.22□□□□□ -1.25
SCARNA16.4-201ENST00000516956 IL13P35225 146 aa7.22□□□□□ -1.25
SCARNA16.4-201ENST00000516956 DDB1Q16531 1140 aa7.22□□□□□ -1.25
SCARNA16.4-201ENST00000516956 BCL9LQ86UU0 1499 aa7.22□□□□□ -1.25
SCARNA16.4-201ENST00000516956 FCHSD2O94868 740 aa7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 AMOTQ4VCS5 1084 aa7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 C1orf141Q5JVX7 400 aa7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 BARGINQ6ZT62 677 aa7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 SEPT12Q8IYM1 358 aa7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 FAM9BQ8IZU0 186 aa7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 MIER1Q8N108 512 aa7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 ZCRB1Q8TBF4 217 aaKnown RBP7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 DDX54Q8TDD1 881 aaKnown RBP7.21□□□□□ -1.26
SCARNA16.4-201ENST00000516956 LMO7Q8WWI1 1683 aa7.2□□□□□ -1.26
SCARNA16.4-201ENST00000516956 FAM208AQ9UK61 1670 aaKnown RBP7.2□□□□□ -1.26
SCARNA16.4-201ENST00000516956 PRKAR2BP31323 418 aa7.2□□□□□ -1.26
SCARNA16.4-201ENST00000516956 POTEAQ6S8J7 498 aa7.2□□□□□ -1.26
SCARNA16.4-201ENST00000516956 IGSF1Q8N6C5 1336 aa7.2□□□□□ -1.26
SCARNA16.4-201ENST00000516956 PEAK1Q9H792 1746 aa7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 COL18A1P39060 1754 aa7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 HSP90AB1P08238 724 aaKnown RBP7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 ZNF530Q6P9A1 599 aaPredicted RBP7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 KRT27Q7Z3Y8 459 aa7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 GAS2L2Q8NHY3 880 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms