RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 GATA4P43694 442 aa2.79□□□□□ -1.96
RNU6-557P-201ENST00000516842 JAG1P78504 1218 aa2.79□□□□□ -1.96
RNU6-557P-201ENST00000516842 METTL3Q86U44 580 aaKnown RBP2.79□□□□□ -1.96
RNU6-557P-201ENST00000516842 ZNF511Q8NB15 262 aa2.79□□□□□ -1.96
RNU6-557P-201ENST00000516842 UNC93B1Q9H1C4 597 aa2.79□□□□□ -1.96
RNU6-557P-201ENST00000516842 CBLBQ13191 982 aa2.78□□□□□ -1.96
RNU6-557P-201ENST00000516842 DAXXQ9UER7 740 aaPredicted RBP2.78□□□□□ -1.96
RNU6-557P-201ENST00000516842 SPTLC1O15269 473 aa2.77□□□□□ -1.97
RNU6-557P-201ENST00000516842 SPINT1O43278 529 aa2.77□□□□□ -1.97
RNU6-557P-201ENST00000516842 GUCA2AQ02747 115 aa2.77□□□□□ -1.97
RNU6-557P-201ENST00000516842 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
RNU6-557P-201ENST00000516842 ZNF837Q96EG3 531 aaPredicted RBP2.77□□□□□ -1.97
RNU6-557P-201ENST00000516842 CDK15Q96Q40 435 aa2.77□□□□□ -1.97
RNU6-557P-201ENST00000516842 OATP04181 439 aa2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 MLLT3P42568 568 aaPredicted RBP2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 NR5A1Q13285 461 aa2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 GRIPAP1Q4V328 841 aa2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 FAM174AQ8TBP5 190 aa2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 FOXJ1Q92949 421 aa2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 INSM2Q96T92 566 aaPredicted RBP2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 RNF114Q9Y508 228 aa2.76□□□□□ -1.97
RNU6-557P-201ENST00000516842 KRTAP9-7A8MTY7 169 aa2.75□□□□□ -1.97
RNU6-557P-201ENST00000516842 DBN1Q16643 649 aa2.75□□□□□ -1.97
RNU6-557P-201ENST00000516842 GTPBP3Q969Y2 492 aaKnown RBP2.75□□□□□ -1.97
RNU6-557P-201ENST00000516842 AGBL1Q96MI9 1066 aa2.75□□□□□ -1.97
RNU6-557P-201ENST00000516842 OXCT2Q9BYC2 517 aaPredicted RBP2.75□□□□□ -1.97
RNU6-557P-201ENST00000516842 NUTM2FA1L443 756 aa2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 CCNYL3P0C7X3 344 aa2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 MX2P20592 715 aa2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 E2F4Q16254 413 aa2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 C4orf48Q5BLP8 95 aa2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 RNF217Q8TC41 542 aa2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 LRRC4BQ9NT99 713 aa2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 ARIH1Q9Y4X5 557 aaPredicted RBP2.74□□□□□ -1.97
RNU6-557P-201ENST00000516842 GNB5O14775 395 aa2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 TAL1P17542 331 aaPredicted RBP2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 AMPD1P23109 780 aa2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 FSHRP23945 695 aa2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 GIGYF2Q6Y7W6 1299 aaKnown RBP2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 EDARADDQ8WWZ3 215 aa2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 PHOX2BQ99453 314 aa2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 POLMQ9NP87 494 aaPredicted RBP2.73□□□□□ -1.97
RNU6-557P-201ENST00000516842 RHOQP17081 205 aa2.72□□□□□ -1.97
RNU6-557P-201ENST00000516842 RELBQ01201 579 aa2.72□□□□□ -1.97
RNU6-557P-201ENST00000516842 RIPOR1Q6ZS17 1223 aa2.72□□□□□ -1.97
RNU6-557P-201ENST00000516842 ZNF395Q9H8N7 513 aaPredicted RBP2.72□□□□□ -1.97
RNU6-557P-201ENST00000516842 EVA1BQ9NVM1 165 aa2.72□□□□□ -1.97
RNU6-557P-201ENST00000516842 MS4A1P11836 297 aa2.71□□□□□ -1.98
RNU6-557P-201ENST00000516842 KCNH2Q12809 1159 aa2.71□□□□□ -1.98
RNU6-557P-201ENST00000516842 TRIM22Q8IYM9 498 aa2.71□□□□□ -1.98
RNU6-557P-201ENST00000516842 KDM4AO75164 1064 aa2.7□□□□□ -1.98
RNU6-557P-201ENST00000516842 FOXR1Q6PIV2 292 aa2.7□□□□□ -1.98
RNU6-557P-201ENST00000516842 Q6ZVU0 165 aa2.7□□□□□ -1.98
RNU6-557P-201ENST00000516842 SULF1Q8IWU6 871 aa2.7□□□□□ -1.98
RNU6-557P-201ENST00000516842 KLRG1Q96E93 195 aa2.7□□□□□ -1.98
RNU6-557P-201ENST00000516842 ELNP15502 786 aa2.69□□□□□ -1.98
RNU6-557P-201ENST00000516842 IRAK1P51617 712 aa2.69□□□□□ -1.98
RNU6-557P-201ENST00000516842 PPP1R26Q5T8A7 1209 aaPredicted RBP2.69□□□□□ -1.98
RNU6-557P-201ENST00000516842 PRPF38BQ5VTL8 546 aaKnown RBP2.69□□□□□ -1.98
RNU6-557P-201ENST00000516842 FOXD4L5Q5VV16 416 aaPredicted RBP2.69□□□□□ -1.98
RNU6-557P-201ENST00000516842 PRICKLE2Q7Z3G6 844 aa2.69□□□□□ -1.98
RNU6-557P-201ENST00000516842 EMILIN1Q9Y6C2 1016 aa2.69□□□□□ -1.98
RNU6-557P-201ENST00000516842 HOXA2O43364 376 aa2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 DGKGP49619 791 aa2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 AGERQ15109 404 aa2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 RETREG3Q86VR2 466 aa2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 CCDC116Q8IYX3 515 aa2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 TRIM11Q96F44 468 aa2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 BTBD6Q96KE9 485 aa2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 NOP53Q9NZM5 478 aaKnown RBP2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 NSFL1CQ9UNZ2 370 aaKnown RBP2.68□□□□□ -1.98
RNU6-557P-201ENST00000516842 FCHSD2O94868 740 aa2.67□□□□□ -1.98
RNU6-557P-201ENST00000516842 PTPRNQ16849 979 aa2.67□□□□□ -1.98
RNU6-557P-201ENST00000516842 VASH1Q7L8A9 365 aaPredicted RBP2.67□□□□□ -1.98
RNU6-557P-201ENST00000516842 TRIM52Q96A61 297 aa2.67□□□□□ -1.98
RNU6-557P-201ENST00000516842 TRERF1Q96PN7 1200 aa2.67□□□□□ -1.98
RNU6-557P-201ENST00000516842 GAS2L1Q99501 681 aaPredicted RBP2.67□□□□□ -1.98
RNU6-557P-201ENST00000516842 FAM229AH3BQW9 127 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 CD46P15529 392 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 CTHP32929 405 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 MAP2K3P46734 347 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 LYSMD3Q7Z3D4 306 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 PLVAPQ9BX97 442 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 GGA1Q9UJY5 639 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 PCDHGC3Q9UN70 934 aa2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 OAS3Q9Y6K5 1087 aaKnown RBP2.66□□□□□ -1.98
RNU6-557P-201ENST00000516842 C2CD2LO14523 706 aa2.65□□□□□ -1.99
RNU6-557P-201ENST00000516842 THBS1P07996 1170 aa2.65□□□□□ -1.99
RNU6-557P-201ENST00000516842 PCMTD2Q9NV79 361 aa2.65□□□□□ -1.99
RNU6-557P-201ENST00000516842 C6orf229H3BNL8 230 aa2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 PIK3R2O00459 728 aa2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 SPATA31C1P0DKV0 1188 aa2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 KRTAP1-1Q07627 177 aa2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 GMCL1Q96IK5 515 aa2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 KRTAP9-3Q9BYQ3 159 aa2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 MAP10Q9P2G4 905 aa2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 GDF2Q9UK05 429 aaPredicted RBP2.64□□□□□ -1.99
RNU6-557P-201ENST00000516842 C8AP07357 584 aa2.63□□□□□ -1.99
RNU6-557P-201ENST00000516842 H2AFB1P0C5Y9 115 aa2.63□□□□□ -1.99
RNU6-557P-201ENST00000516842 H2AFB2P0C5Z0 115 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms