RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 NAP1L1P55209 391 aaKnown RBP17.35■□□□□ 0.37
TRIO-222ENST00000515144 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
TRIO-222ENST00000515144 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 KIAA1107Q9UPP5 1409 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
TRIO-222ENST00000515144 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
TRIO-222ENST00000515144 ZNF592Q92610 1267 aa17.34■□□□□ 0.37
TRIO-222ENST00000515144 BCAR3O75815 825 aa17.34■□□□□ 0.37
TRIO-222ENST00000515144 SLC4A8Q2Y0W8 1093 aa17.34■□□□□ 0.37
TRIO-222ENST00000515144 ATP6V1DQ9Y5K8 247 aa17.33■□□□□ 0.37
TRIO-222ENST00000515144 GNAT3A8MTJ3 354 aa17.33■□□□□ 0.37
TRIO-222ENST00000515144 SART3Q15020 963 aaKnown RBP17.33■□□□□ 0.37
TRIO-222ENST00000515144 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
TRIO-222ENST00000515144 NUP133Q8WUM0 1156 aa17.33■□□□□ 0.36
TRIO-222ENST00000515144 ECM2O94769 699 aaPredicted RBP17.32■□□□□ 0.36
TRIO-222ENST00000515144 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
TRIO-222ENST00000515144 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
TRIO-222ENST00000515144 NSD3Q9BZ95 1437 aa17.32■□□□□ 0.36
TRIO-222ENST00000515144 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■■■■■ 149.1
TRIO-222ENST00000515144 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
TRIO-222ENST00000515144 ZHX3Q9H4I2 956 aa17.31■□□□□ 0.36
TRIO-222ENST00000515144 HOOK1Q9UJC3 728 aaKnown RBP17.31■□□□□ 0.36
TRIO-222ENST00000515144 XBP1P17861 261 aa17.31■□□□□ 0.36
TRIO-222ENST00000515144 CT47A1Q5JQC4 288 aaPredicted RBP17.31■□□□□ 0.36
TRIO-222ENST00000515144 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
TRIO-222ENST00000515144 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
TRIO-222ENST00000515144 ODF2Q5BJF6 829 aa17.31■□□□□ 0.36
TRIO-222ENST00000515144 GPTP24298 496 aa17.3■□□□□ 0.36
TRIO-222ENST00000515144 CDK5RAP3Q96JB5 506 aa17.3■□□□□ 0.36
TRIO-222ENST00000515144 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
TRIO-222ENST00000515144 FANCAO15360 1455 aa17.3■□□□□ 0.36
TRIO-222ENST00000515144 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIO-222ENST00000515144 GNAI3P08754 354 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 HSPA2P54652 639 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
TRIO-222ENST00000515144 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 CCDC141Q6ZP82 1450 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 USP5P45974 858 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 WDR78Q5VTH9 848 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 NME9Q86XW9 330 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 PAF1Q8N7H5 531 aa17.29■□□□□ 0.36
TRIO-222ENST00000515144 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
TRIO-222ENST00000515144 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
TRIO-222ENST00000515144 AACSQ86V21 672 aa17.28■□□□□ 0.36
TRIO-222ENST00000515144 GOLGA6L1Q8N7Z2 621 aa17.28■□□□□ 0.36
TRIO-222ENST00000515144 TDO2P48775 406 aa17.28■□□□□ 0.36
TRIO-222ENST00000515144 STAC3Q96MF2 364 aa17.28■□□□□ 0.36
TRIO-222ENST00000515144 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRIO-222ENST00000515144 ANKRD20A12PQ8NF67 263 aa17.27■□□□□ 0.36
TRIO-222ENST00000515144 EXOC5O00471 708 aa17.27■□□□□ 0.36
TRIO-222ENST00000515144 IDH1O75874 414 aaKnown RBP17.27■□□□□ 0.36
TRIO-222ENST00000515144 TTLL5Q6EMB2 1281 aa17.27■□□□□ 0.36
TRIO-222ENST00000515144 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.36
TRIO-222ENST00000515144 MYD88Q99836 296 aa17.27■□□□□ 0.35
TRIO-222ENST00000515144 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
TRIO-222ENST00000515144 AK7Q96M32 723 aa17.26■□□□□ 0.35
TRIO-222ENST00000515144 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
TRIO-222ENST00000515144 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
TRIO-222ENST00000515144 KRT18P05783 430 aaKnown RBP17.26■□□□□ 0.35
TRIO-222ENST00000515144 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.358e-7■■□□□ 13.1
TRIO-222ENST00000515144 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
TRIO-222ENST00000515144 FBLN1P23142 703 aa17.25■□□□□ 0.35
TRIO-222ENST00000515144 SASS6Q6UVJ0 657 aa17.25■□□□□ 0.35
TRIO-222ENST00000515144 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
TRIO-222ENST00000515144 CCDC69A6NI79 296 aa17.25■□□□□ 0.35
TRIO-222ENST00000515144 IL1RAPL2Q9NP60 686 aa17.25■□□□□ 0.35
TRIO-222ENST00000515144 IDI1Q13907 227 aa17.24■□□□□ 0.35
TRIO-222ENST00000515144 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
TRIO-222ENST00000515144 PSMA5P28066 241 aa17.24■□□□□ 0.35
TRIO-222ENST00000515144 PHF8Q9UPP1 1060 aa17.24■□□□□ 0.35
TRIO-222ENST00000515144 HFM1A2PYH4 1435 aa17.24■□□□□ 0.35
TRIO-222ENST00000515144 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
TRIO-222ENST00000515144 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 CABLES1Q8TDN4 633 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 PDILTQ8N807 584 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 RFC4P35249 363 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
TRIO-222ENST00000515144 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
TRIO-222ENST00000515144 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
TRIO-222ENST00000515144 JARID2Q92833 1246 aaPredicted RBP17.22■□□□□ 0.35
TRIO-222ENST00000515144 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
TRIO-222ENST00000515144 SRCIN1Q9C0H9 1055 aa17.22■□□□□ 0.35
TRIO-222ENST00000515144 PNISRQ8TF01 805 aaKnown RBP17.22■□□□□ 0.35
TRIO-222ENST00000515144 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
TRIO-222ENST00000515144 IPO7O95373 1038 aaKnown RBP17.22■□□□□ 0.35
TRIO-222ENST00000515144 MSH6P52701 1360 aa17.21■□□□□ 0.35
TRIO-222ENST00000515144 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
TRIO-222ENST00000515144 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.34
TRIO-222ENST00000515144 C6orf229H3BNL8 230 aa17.21■□□□□ 0.34
TRIO-222ENST00000515144 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
TRIO-222ENST00000515144 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
TRIO-222ENST00000515144 DENND4BO75064 1496 aaPredicted RBP17.2■□□□□ 0.34
TRIO-222ENST00000515144 NACAP1Q9BZK3 213 aa17.2■□□□□ 0.34
TRIO-222ENST00000515144 TMOD2Q9NZR1 351 aa17.2■□□□□ 0.34
TRIO-222ENST00000515144 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
TRIO-222ENST00000515144 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms