RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ZBTB7CA1YPR0 619 aa5□□□□□ -1.61
CHD1-211ENST00000514344 NGDNQ8NEJ9 315 aaKnown RBP5□□□□□ -1.61
CHD1-211ENST00000514344 ZNF219Q9P2Y4 722 aaPredicted RBP5□□□□□ -1.61
CHD1-211ENST00000514344 ACIN1Q9UKV3 1341 aaKnown RBP5□□□□□ -1.61
CHD1-211ENST00000514344 RGL3Q3MIN7 710 aa5□□□□□ -1.61
CHD1-211ENST00000514344 PIP4P2Q8N4L2 257 aa5□□□□□ -1.61
CHD1-211ENST00000514344 ZNF827Q17R98 1081 aa4.99□□□□□ -1.61
CHD1-211ENST00000514344 KLRG1Q96E93 195 aa4.99□□□□□ -1.61
CHD1-211ENST00000514344 CRYBG1Q9Y4K1 1723 aa4.99□□□□□ -1.61
CHD1-211ENST00000514344 PEAK1Q9H792 1746 aa4.99□□□□□ -1.61
CHD1-211ENST00000514344 C11orf95C9JLR9 678 aaPredicted RBP4.99□□□□□ -1.61
CHD1-211ENST00000514344 PRAM1Q96QH2 718 aa4.99□□□□□ -1.61
CHD1-211ENST00000514344 ABCC11Q96J66 1382 aa4.99□□□□□ -1.61
CHD1-211ENST00000514344 PARP4Q9UKK3 1724 aaKnown RBP4.99□□□□□ -1.61
CHD1-211ENST00000514344 MARCH10Q8NA82 808 aaPredicted RBP4.98□□□□□ -1.61
CHD1-211ENST00000514344 THRAP3Q9Y2W1 955 aaKnown RBP4.98□□□□□ -1.61
CHD1-211ENST00000514344 KAT6BQ8WYB5 2073 aa4.98□□□□□ -1.61
CHD1-211ENST00000514344 PPLO60437 1756 aa4.98□□□□□ -1.61
CHD1-211ENST00000514344 ACSBG1Q96GR2 724 aa4.98□□□□□ -1.61
CHD1-211ENST00000514344 ADCY9O60503 1353 aa4.98□□□□□ -1.61
CHD1-211ENST00000514344 DHX57Q6P158 1386 aaKnown RBP4.98□□□□□ -1.61
CHD1-211ENST00000514344 TOPAZ1Q8N9V7 1692 aa4.98□□□□□ -1.61
CHD1-211ENST00000514344 YTHDC2Q9H6S0 1430 aaKnown RBP4.98□□□□□ -1.61
CHD1-211ENST00000514344 LRRC37A3O60309 1634 aa4.98□□□□□ -1.61
CHD1-211ENST00000514344 TOMM70O94826 608 aa4.98□□□□□ -1.61
CHD1-211ENST00000514344 WDR90Q96KV7 1748 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 FAM161AQ3B820 660 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 JMYQ8N9B5 988 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 PHRF1Q9P1Y6 1649 aaKnown RBP4.97□□□□□ -1.61
CHD1-211ENST00000514344 RPGRIP1LQ68CZ1 1315 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 PRR36Q9H6K5 1346 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 ATP7BP35670 1465 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 KCNQ4P56696 695 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 TOM1L2Q6ZVM7 507 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 POGKQ9P215 609 aa4.97□□□□□ -1.61
CHD1-211ENST00000514344 HSPA1AP0DMV8 641 aaKnown RBP4.96□□□□□ -1.61
CHD1-211ENST00000514344 HSPA1BP0DMV9 641 aaKnown RBP4.96□□□□□ -1.61
CHD1-211ENST00000514344 MSL1Q68DK7 614 aa4.96□□□□□ -1.61
CHD1-211ENST00000514344 LRRC4BQ9NT99 713 aa4.96□□□□□ -1.61
CHD1-211ENST00000514344 TFCP2L1Q9NZI6 479 aa4.96□□□□□ -1.61
CHD1-211ENST00000514344 CRB1P82279 1406 aa4.96□□□□□ -1.62
CHD1-211ENST00000514344 MINK1Q8N4C8 1332 aaPredicted RBP4.96□□□□□ -1.62
CHD1-211ENST00000514344 KNDC1Q76NI1 1749 aa4.96□□□□□ -1.62
CHD1-211ENST00000514344 COL5A2P05997 1499 aaPredicted RBP4.96□□□□□ -1.62
CHD1-211ENST00000514344 NMRK2Q9NPI5 230 aa4.96□□□□□ -1.62
CHD1-211ENST00000514344 AKAP12Q02952 1782 aa4.95□□□□□ -1.62
CHD1-211ENST00000514344 PNPLA7Q6ZV29 1317 aa4.95□□□□□ -1.62
CHD1-211ENST00000514344 ANKARQ7Z5J8 1434 aa4.95□□□□□ -1.62
CHD1-211ENST00000514344 ABTB2Q8N961 1025 aa4.95□□□□□ -1.62
CHD1-211ENST00000514344 SLC16A10Q8TF71 515 aa4.95□□□□□ -1.62
CHD1-211ENST00000514344 LMO7Q8WWI1 1683 aa4.94□□□□□ -1.62
CHD1-211ENST00000514344 PAPPAQ13219 1627 aa4.94□□□□□ -1.62
CHD1-211ENST00000514344 ROCK1Q13464 1354 aa4.94□□□□□ -1.62
CHD1-211ENST00000514344 AATKQ6ZMQ8 1374 aa4.94□□□□□ -1.62
CHD1-211ENST00000514344 LOC105371045A0A1W2PR82 267 aa4.94□□□□□ -1.62
CHD1-211ENST00000514344 GCP02774 474 aa4.94□□□□□ -1.62
CHD1-211ENST00000514344 CFAP70Q5T0N1 1121 aa4.94□□□□□ -1.62
CHD1-211ENST00000514344 C16orf71Q8IYS4 520 aaPredicted RBP4.94□□□□□ -1.62
CHD1-211ENST00000514344 EXOC5O00471 708 aa4.93□□□□□ -1.62
CHD1-211ENST00000514344 TRAK1Q9UPV9 953 aa4.93□□□□□ -1.62
CHD1-211ENST00000514344 BRD4O60885 1362 aaPredicted RBP4.93□□□□□ -1.62
CHD1-211ENST00000514344 TNS2Q63HR2 1409 aa4.93□□□□□ -1.62
CHD1-211ENST00000514344 TNRC18O15417 2968 aaPredicted RBP4.93□□□□□ -1.62
CHD1-211ENST00000514344 AKT1S1Q96B36 256 aa4.93□□□□□ -1.62
CHD1-211ENST00000514344 PIK3C2GO75747 1445 aa4.93□□□□□ -1.62
CHD1-211ENST00000514344 CSB-PGBD3P0DP91 1061 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 CPDO75976 1380 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 ARHGEF28Q8N1W1 1705 aaKnown RBP4.92□□□□□ -1.62
CHD1-211ENST00000514344 WASLO00401 505 aaPredicted RBP4.92□□□□□ -1.62
CHD1-211ENST00000514344 SIRT1Q96EB6 747 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 SLC4A1APQ9BWU0 796 aaKnown RBP4.92□□□□□ -1.62
CHD1-211ENST00000514344 AXIN2Q9Y2T1 843 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 IGSF1Q8N6C5 1336 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 BTAF1O14981 1849 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 TULP4Q9NRJ4 1543 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 BCL9O00512 1426 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 USP6P35125 1406 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 ANKRD30BQ9BXX2 1392 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 SOX12O15370 315 aa4.92□□□□□ -1.62
CHD1-211ENST00000514344 TUBGCP6Q96RT7 1819 aa4.91□□□□□ -1.62
CHD1-211ENST00000514344 ACEP12821 1306 aa4.91□□□□□ -1.62
CHD1-211ENST00000514344 EVX2Q03828 476 aa4.91□□□□□ -1.62
CHD1-211ENST00000514344 SYTL4Q96C24 671 aaPredicted RBP4.91□□□□□ -1.62
CHD1-211ENST00000514344 WDR17Q8IZU2 1322 aa4.91□□□□□ -1.62
CHD1-211ENST00000514344 NLRP13Q86W25 1043 aa4.91□□□□□ -1.62
CHD1-211ENST00000514344 COL23A1Q86Y22 540 aaPredicted RBP4.91□□□□□ -1.62
CHD1-211ENST00000514344 RBM46Q8TBY0 533 aaKnown RBP4.91□□□□□ -1.62
CHD1-211ENST00000514344 NUDT16Q96DE0 195 aaKnown RBP4.91□□□□□ -1.62
CHD1-211ENST00000514344 C14orf93Q9H972 538 aaKnown RBP4.91□□□□□ -1.62
CHD1-211ENST00000514344 CD2APQ9Y5K6 639 aa4.91□□□□□ -1.62
CHD1-211ENST00000514344 NHSQ6T4R5 1651 aa4.91□□□□□ -1.62
CHD1-211ENST00000514344 CDCA7Q9BWT1 371 aaPredicted RBP4.9□□□□□ -1.62
CHD1-211ENST00000514344 COL24A1Q17RW2 1714 aa4.9□□□□□ -1.62
CHD1-211ENST00000514344 EIF3AQ14152 1382 aaKnown RBP4.9□□□□□ -1.63
CHD1-211ENST00000514344 A0A0C4DFX4 3053 aa4.9□□□□□ -1.63
CHD1-211ENST00000514344 WNK3Q9BYP7 1800 aa4.9□□□□□ -1.63
CHD1-211ENST00000514344 USP19O94966 1318 aa4.9□□□□□ -1.63
CHD1-211ENST00000514344 MLLT1Q03111 559 aaPredicted RBP4.89□□□□□ -1.63
CHD1-211ENST00000514344 SMIM5Q71RC9 77 aa4.89□□□□□ -1.63
CHD1-211ENST00000514344 NLRP6P59044 892 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms