RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
SNF8-212ENST00000514089 ATRNO75882 1429 aa19.76■□□□□ 0.75
SNF8-212ENST00000514089 FAM98CQ17RN3 349 aaKnown RBP19.75■□□□□ 0.75
SNF8-212ENST00000514089 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
SNF8-212ENST00000514089 ANKRD24Q8TF21 1146 aa19.75■□□□□ 0.75
SNF8-212ENST00000514089 NLRP2Q9NX02 1062 aa19.75■□□□□ 0.75
SNF8-212ENST00000514089 NRKQ7Z2Y5 1582 aa19.74■□□□□ 0.75
SNF8-212ENST00000514089 ZNF316A6NFI3 1004 aaPredicted RBP19.74■□□□□ 0.75
SNF8-212ENST00000514089 HOXC9P31274 260 aa19.74■□□□□ 0.75
SNF8-212ENST00000514089 SPATA31A5Q5VU36 1347 aa19.74■□□□□ 0.75
SNF8-212ENST00000514089 SPATA31A7Q8IWB4 1347 aa19.74■□□□□ 0.75
SNF8-212ENST00000514089 TCP11L2Q8N4U5 519 aa19.73■□□□□ 0.75
SNF8-212ENST00000514089 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
SNF8-212ENST00000514089 WDR17Q8IZU2 1322 aa19.72■□□□□ 0.75
SNF8-212ENST00000514089 COL14A1Q05707 1796 aaKnown RBP19.71■□□□□ 0.75
SNF8-212ENST00000514089 SEPT12Q8IYM1 358 aa19.71■□□□□ 0.75
SNF8-212ENST00000514089 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
SNF8-212ENST00000514089 PHRF1Q9P1Y6 1649 aaKnown RBP19.7■□□□□ 0.74
SNF8-212ENST00000514089 POLKQ9UBT6 870 aa19.7■□□□□ 0.74
SNF8-212ENST00000514089 THRAP3Q9Y2W1 955 aaKnown RBP19.7■□□□□ 0.74
SNF8-212ENST00000514089 MYOM1P52179 1685 aa19.7■□□□□ 0.74
SNF8-212ENST00000514089 CAMTA1Q9Y6Y1 1673 aa19.69■□□□□ 0.74
SNF8-212ENST00000514089 HSP90AB2PQ58FF8 381 aa19.69■□□□□ 0.74
SNF8-212ENST00000514089 NFAT5O94916 1531 aa19.68■□□□□ 0.74
SNF8-212ENST00000514089 CARD10Q9BWT7 1032 aa19.68■□□□□ 0.74
SNF8-212ENST00000514089 COL5A2P05997 1499 aaPredicted RBP19.67■□□□□ 0.74
SNF8-212ENST00000514089 ERBB3P21860 1342 aa19.67■□□□□ 0.74
SNF8-212ENST00000514089 ABCA3Q99758 1704 aa19.67■□□□□ 0.74
SNF8-212ENST00000514089 CRB1P82279 1406 aa19.67■□□□□ 0.74
SNF8-212ENST00000514089 ONECUT3O60422 494 aaPredicted RBP19.66■□□□□ 0.74
SNF8-212ENST00000514089 PDE3BQ13370 1112 aa19.66■□□□□ 0.74
SNF8-212ENST00000514089 BARGINQ6ZT62 677 aa19.66■□□□□ 0.74
SNF8-212ENST00000514089 RTL1A6NKG5 1358 aa19.66■□□□□ 0.74
SNF8-212ENST00000514089 FLT4P35916 1363 aa19.66■□□□□ 0.74
SNF8-212ENST00000514089 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
SNF8-212ENST00000514089 SMG6Q86US8 1419 aaKnown RBP19.66■□□□□ 0.74
SNF8-212ENST00000514089 KIF24Q5T7B8 1368 aa19.65■□□□□ 0.74
SNF8-212ENST00000514089 CDCA7Q9BWT1 371 aaPredicted RBP19.64■□□□□ 0.73
SNF8-212ENST00000514089 MARF1Q9Y4F3 1742 aaKnown RBP19.63■□□□□ 0.73
SNF8-212ENST00000514089 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
SNF8-212ENST00000514089 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
SNF8-212ENST00000514089 MTHFSP49914 203 aa19.63■□□□□ 0.73
SNF8-212ENST00000514089 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
SNF8-212ENST00000514089 INSRP06213 1382 aa19.62■□□□□ 0.73
SNF8-212ENST00000514089 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
SNF8-212ENST00000514089 EXOC5O00471 708 aa19.61■□□□□ 0.73
SNF8-212ENST00000514089 DDB1Q16531 1140 aa19.61■□□□□ 0.73
SNF8-212ENST00000514089 PLCH1Q4KWH8 1693 aa19.61■□□□□ 0.73
SNF8-212ENST00000514089 RGS12O14924 1447 aa19.6■□□□□ 0.73
SNF8-212ENST00000514089 NWD2Q9ULI1 1742 aa19.6■□□□□ 0.73
SNF8-212ENST00000514089 IL2RBP14784 551 aa19.6■□□□□ 0.73
SNF8-212ENST00000514089 NBPF6Q5VWK0 638 aa19.6■□□□□ 0.73
SNF8-212ENST00000514089 NBPF4Q96M43 638 aa19.6■□□□□ 0.73
SNF8-212ENST00000514089 USHBP1Q8N6Y0 703 aa19.59■□□□□ 0.73
SNF8-212ENST00000514089 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
SNF8-212ENST00000514089 CFAP53Q96M91 514 aa19.59■□□□□ 0.73
SNF8-212ENST00000514089 ABCC6O95255 1503 aa19.57■□□□□ 0.72
SNF8-212ENST00000514089 SOCS7O14512 581 aa19.57■□□□□ 0.72
SNF8-212ENST00000514089 EIF4A2Q14240 407 aaKnown RBP19.57■□□□□ 0.72
SNF8-212ENST00000514089 USP54Q70EL1 1684 aa19.56■□□□□ 0.72
SNF8-212ENST00000514089 LMO7Q8WWI1 1683 aa19.56■□□□□ 0.72
SNF8-212ENST00000514089 KIF20BQ96Q89 1820 aa19.56■□□□□ 0.72
SNF8-212ENST00000514089 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
SNF8-212ENST00000514089 TATP17735 454 aaPredicted RBP19.55■□□□□ 0.72
SNF8-212ENST00000514089 PPP2R1AP30153 589 aa19.55■□□□□ 0.72
SNF8-212ENST00000514089 RALBP1Q15311 655 aa19.55■□□□□ 0.72
SNF8-212ENST00000514089 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.54■□□□□ 0.72
SNF8-212ENST00000514089 GLI3P10071 1580 aa19.54■□□□□ 0.72
SNF8-212ENST00000514089 FAM182BQ5T319 152 aa19.54■□□□□ 0.72
SNF8-212ENST00000514089 EYA1Q99502 592 aa19.54■□□□□ 0.72
SNF8-212ENST00000514089 SF3B2Q13435 895 aaKnown RBP19.53■□□□□ 0.72
SNF8-212ENST00000514089 DDX54Q8TDD1 881 aaKnown RBP19.53■□□□□ 0.72
SNF8-212ENST00000514089 NRAPQ86VF7 1730 aa19.52■□□□□ 0.72
SNF8-212ENST00000514089 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
SNF8-212ENST00000514089 FAM196AQ6ZSG2 479 aa19.52■□□□□ 0.72
SNF8-212ENST00000514089 NUDCQ9Y266 331 aa19.52■□□□□ 0.72
SNF8-212ENST00000514089 ZCRB1Q8TBF4 217 aaKnown RBP19.51■□□□□ 0.71
SNF8-212ENST00000514089 COL18A1P39060 1754 aa19.5■□□□□ 0.71
SNF8-212ENST00000514089 IL13P35225 146 aa19.5■□□□□ 0.71
SNF8-212ENST00000514089 SULT6B1Q6IMI4 303 aa19.49■□□□□ 0.71
SNF8-212ENST00000514089 SPG7Q9UQ90 795 aa19.48■□□□□ 0.71
SNF8-212ENST00000514089 LTN1O94822 1766 aa19.47■□□□□ 0.71
SNF8-212ENST00000514089 ANP32CO43423 234 aa19.47■□□□□ 0.71
SNF8-212ENST00000514089 CCDC125Q86Z20 511 aa19.47■□□□□ 0.71
SNF8-212ENST00000514089 UPF1Q92900 1129 aaKnown RBP eCLIP19.47■□□□□ 0.71
SNF8-212ENST00000514089 HMOX1P09601 288 aa19.45■□□□□ 0.7
SNF8-212ENST00000514089 MARCH10Q8NA82 808 aaPredicted RBP19.45■□□□□ 0.7
SNF8-212ENST00000514089 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
SNF8-212ENST00000514089 TRIM37O94972 964 aa19.44■□□□□ 0.7
SNF8-212ENST00000514089 PLEKHO1Q53GL0 409 aaPredicted RBP19.44■□□□□ 0.7
SNF8-212ENST00000514089 IGSF1Q8N6C5 1336 aa19.44■□□□□ 0.7
SNF8-212ENST00000514089 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
SNF8-212ENST00000514089 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
SNF8-212ENST00000514089 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNF8-212ENST00000514089 PRKRIP1Q9H875 184 aaPredicted RBP19.43■□□□□ 0.7
SNF8-212ENST00000514089 DISP2A7MBM2 1401 aa19.42■□□□□ 0.7
SNF8-212ENST00000514089 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
SNF8-212ENST00000514089 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
SNF8-212ENST00000514089 AMOTQ4VCS5 1084 aa19.41■□□□□ 0.7
SNF8-212ENST00000514089 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 322.2 ms