RNA–Protein interactions for RNA: ENST00000513268.1

H2AFY-220, Transcript of H2A histone family member Y, humanhuman

TSL 3

Gene H2AFY, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-220ENST00000513268 USP47Q96K76 1375 aa12.77□□□□□ -0.37
H2AFY-220ENST00000513268 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.76□□□□□ -0.37
H2AFY-220ENST00000513268 GCP02774 474 aa12.76□□□□□ -0.37
H2AFY-220ENST00000513268 HDGFL2Q7Z4V5 671 aaPredicted RBP12.76□□□□□ -0.37
H2AFY-220ENST00000513268 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
H2AFY-220ENST00000513268 TTC21BQ7Z4L5 1316 aa12.76□□□□□ -0.37
H2AFY-220ENST00000513268 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
H2AFY-220ENST00000513268 NLRP6P59044 892 aa12.75□□□□□ -0.37
H2AFY-220ENST00000513268 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
H2AFY-220ENST00000513268 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
H2AFY-220ENST00000513268 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
H2AFY-220ENST00000513268 BTG4Q9NY30 223 aa12.74□□□□□ -0.37
H2AFY-220ENST00000513268 COL14A1Q05707 1796 aaKnown RBP12.74□□□□□ -0.37
H2AFY-220ENST00000513268 USP31Q70CQ4 1352 aa12.73□□□□□ -0.37
H2AFY-220ENST00000513268 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
H2AFY-220ENST00000513268 ABCA3Q99758 1704 aa12.73□□□□□ -0.37
H2AFY-220ENST00000513268 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
H2AFY-220ENST00000513268 CRYBG1Q9Y4K1 1723 aa12.72□□□□□ -0.37
H2AFY-220ENST00000513268 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
H2AFY-220ENST00000513268 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
H2AFY-220ENST00000513268 RGS12O14924 1447 aa12.71□□□□□ -0.37
H2AFY-220ENST00000513268 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.37
H2AFY-220ENST00000513268 NUTM2GQ5VZR2 741 aa12.71□□□□□ -0.37
H2AFY-220ENST00000513268 CD163L1Q9NR16 1453 aa12.71□□□□□ -0.38
H2AFY-220ENST00000513268 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
H2AFY-220ENST00000513268 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
H2AFY-220ENST00000513268 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
H2AFY-220ENST00000513268 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
H2AFY-220ENST00000513268 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
H2AFY-220ENST00000513268 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
H2AFY-220ENST00000513268 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
H2AFY-220ENST00000513268 SLIT3O75094 1523 aa12.7□□□□□ -0.38
H2AFY-220ENST00000513268 AKAP12Q02952 1782 aa12.7□□□□□ -0.38
H2AFY-220ENST00000513268 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
H2AFY-220ENST00000513268 THRAP3Q9Y2W1 955 aaKnown RBP12.69□□□□□ -0.38
H2AFY-220ENST00000513268 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
H2AFY-220ENST00000513268 EVA1CP58658 441 aa12.68□□□□□ -0.38
H2AFY-220ENST00000513268 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
H2AFY-220ENST00000513268 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
H2AFY-220ENST00000513268 PHRF1Q9P1Y6 1649 aaKnown RBP12.68□□□□□ -0.38
H2AFY-220ENST00000513268 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
H2AFY-220ENST00000513268 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
H2AFY-220ENST00000513268 SPATA31A1Q5TZJ5 1347 aa12.67□□□□□ -0.38
H2AFY-220ENST00000513268 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
H2AFY-220ENST00000513268 SEPT12Q8IYM1 358 aa12.67□□□□□ -0.38
H2AFY-220ENST00000513268 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
H2AFY-220ENST00000513268 GLI3P10071 1580 aa12.67□□□□□ -0.38
H2AFY-220ENST00000513268 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
H2AFY-220ENST00000513268 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
H2AFY-220ENST00000513268 C11orf95C9JLR9 678 aaPredicted RBP12.66□□□□□ -0.38
H2AFY-220ENST00000513268 CHRNA2Q15822 529 aa12.66□□□□□ -0.38
H2AFY-220ENST00000513268 MS4A3Q96HJ5 214 aa12.66□□□□□ -0.38
H2AFY-220ENST00000513268 ABCC6O95255 1503 aa12.66□□□□□ -0.38
H2AFY-220ENST00000513268 NRAPQ86VF7 1730 aa12.65□□□□□ -0.38
H2AFY-220ENST00000513268 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
H2AFY-220ENST00000513268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.65□□□□□ -0.38
H2AFY-220ENST00000513268 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
H2AFY-220ENST00000513268 KRT27Q7Z3Y8 459 aa12.64□□□□□ -0.39
H2AFY-220ENST00000513268 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
H2AFY-220ENST00000513268 CDCA7Q9BWT1 371 aaPredicted RBP12.64□□□□□ -0.39
H2AFY-220ENST00000513268 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
H2AFY-220ENST00000513268 CAMTA1Q9Y6Y1 1673 aa12.64□□□□□ -0.39
H2AFY-220ENST00000513268 POTEMA6NI47 508 aa12.63□□□□□ -0.39
H2AFY-220ENST00000513268 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
H2AFY-220ENST00000513268 NME9Q86XW9 330 aa12.63□□□□□ -0.39
H2AFY-220ENST00000513268 COG3Q96JB2 828 aa12.63□□□□□ -0.39
H2AFY-220ENST00000513268 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
H2AFY-220ENST00000513268 COL5A2P05997 1499 aaPredicted RBP12.62□□□□□ -0.39
H2AFY-220ENST00000513268 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
H2AFY-220ENST00000513268 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
H2AFY-220ENST00000513268 CRB1P82279 1406 aa12.62□□□□□ -0.39
H2AFY-220ENST00000513268 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
H2AFY-220ENST00000513268 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
H2AFY-220ENST00000513268 FYB1O15117 783 aa12.61□□□□□ -0.39
H2AFY-220ENST00000513268 HSPA5P11021 654 aaKnown RBP12.61□□□□□ -0.39
H2AFY-220ENST00000513268 LARP1Q6PKG0 1096 aaKnown RBP12.61□□□□□ -0.39
H2AFY-220ENST00000513268 TSPYL2Q9H2G4 693 aaPredicted RBP12.61□□□□□ -0.39
H2AFY-220ENST00000513268 NFAT5O94916 1531 aa12.61□□□□□ -0.39
H2AFY-220ENST00000513268 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
H2AFY-220ENST00000513268 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
H2AFY-220ENST00000513268 SLC39A7Q92504 469 aa12.6□□□□□ -0.39
H2AFY-220ENST00000513268 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
H2AFY-220ENST00000513268 AXIN2Q9Y2T1 843 aa12.6□□□□□ -0.39
H2AFY-220ENST00000513268 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
H2AFY-220ENST00000513268 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
H2AFY-220ENST00000513268 IP6K1Q92551 441 aa12.59□□□□□ -0.39
H2AFY-220ENST00000513268 EP400Q96L91 3159 aa12.59□□□□□ -0.39
H2AFY-220ENST00000513268 COL18A1P39060 1754 aa12.58□□□□□ -0.39
H2AFY-220ENST00000513268 C7P10643 843 aa12.58□□□□□ -0.4
H2AFY-220ENST00000513268 BLMP54132 1417 aaPredicted RBP12.58□□□□□ -0.4
H2AFY-220ENST00000513268 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
H2AFY-220ENST00000513268 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
H2AFY-220ENST00000513268 CCDC7Q96M83 1385 aa12.57□□□□□ -0.4
H2AFY-220ENST00000513268 PDE3BQ13370 1112 aa12.57□□□□□ -0.4
H2AFY-220ENST00000513268 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
H2AFY-220ENST00000513268 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
H2AFY-220ENST00000513268 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
H2AFY-220ENST00000513268 A0A0G2JS52 829 aa12.56□□□□□ -0.4
H2AFY-220ENST00000513268 MYT1Q01538 1121 aa12.56□□□□□ -0.4
H2AFY-220ENST00000513268 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms