RNA–Protein interactions for RNA: ENST00000511494.5

H2AFY-216, Transcript of H2A histone family member Y, humanhuman

TSL 2

Gene H2AFY, Length 2,521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-216ENST00000511494 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
H2AFY-216ENST00000511494 NRAPQ86VF7 1730 aa11.38□□□□□ -0.59
H2AFY-216ENST00000511494 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
H2AFY-216ENST00000511494 CDK12Q9NYV4 1490 aaPredicted RBP11.37□□□□□ -0.59
H2AFY-216ENST00000511494 COL18A1P39060 1754 aa11.37□□□□□ -0.59
H2AFY-216ENST00000511494 PER1O15534 1290 aaPredicted RBP11.37□□□□□ -0.59
H2AFY-216ENST00000511494 COL5A2P05997 1499 aaPredicted RBP11.37□□□□□ -0.59
H2AFY-216ENST00000511494 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
H2AFY-216ENST00000511494 GLI3P10071 1580 aa11.36□□□□□ -0.59
H2AFY-216ENST00000511494 RGS12O14924 1447 aa11.36□□□□□ -0.59
H2AFY-216ENST00000511494 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
H2AFY-216ENST00000511494 SPATA31A1Q5TZJ5 1347 aa11.36□□□□□ -0.59
H2AFY-216ENST00000511494 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
H2AFY-216ENST00000511494 IP6K1Q92551 441 aa11.36□□□□□ -0.59
H2AFY-216ENST00000511494 KIF20BQ96Q89 1820 aa11.36□□□□□ -0.59
H2AFY-216ENST00000511494 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
H2AFY-216ENST00000511494 AMPHP49418 695 aa11.35□□□□□ -0.59
H2AFY-216ENST00000511494 FAM98CQ17RN3 349 aaKnown RBP11.35□□□□□ -0.59
H2AFY-216ENST00000511494 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
H2AFY-216ENST00000511494 SEPT12Q8IYM1 358 aa11.34□□□□□ -0.59
H2AFY-216ENST00000511494 ABCC6O95255 1503 aa11.34□□□□□ -0.59
H2AFY-216ENST00000511494 CSB-PGBD3P0DP91 1061 aa11.34□□□□□ -0.59
H2AFY-216ENST00000511494 HOXC9P31274 260 aa11.34□□□□□ -0.59
H2AFY-216ENST00000511494 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
H2AFY-216ENST00000511494 TOM1L2Q6ZVM7 507 aa11.34□□□□□ -0.59
H2AFY-216ENST00000511494 WDR17Q8IZU2 1322 aa11.34□□□□□ -0.59
H2AFY-216ENST00000511494 NSD2O96028 1365 aa11.34□□□□□ -0.59
H2AFY-216ENST00000511494 SOCS7O14512 581 aa11.33□□□□□ -0.6
H2AFY-216ENST00000511494 MORC1Q86VD1 984 aa11.33□□□□□ -0.6
H2AFY-216ENST00000511494 TCP11L2Q8N4U5 519 aa11.33□□□□□ -0.6
H2AFY-216ENST00000511494 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
H2AFY-216ENST00000511494 CRB1P82279 1406 aa11.33□□□□□ -0.6
H2AFY-216ENST00000511494 BARGINQ6ZT62 677 aa11.32□□□□□ -0.6
H2AFY-216ENST00000511494 EMILIN1Q9Y6C2 1016 aa11.32□□□□□ -0.6
H2AFY-216ENST00000511494 BLMP54132 1417 aaPredicted RBP11.32□□□□□ -0.6
H2AFY-216ENST00000511494 LTN1O94822 1766 aa11.32□□□□□ -0.6
H2AFY-216ENST00000511494 ERBB3P21860 1342 aa11.32□□□□□ -0.6
H2AFY-216ENST00000511494 LTV1Q96GA3 475 aaPredicted RBP11.32□□□□□ -0.6
H2AFY-216ENST00000511494 CARD10Q9BWT7 1032 aa11.32□□□□□ -0.6
H2AFY-216ENST00000511494 POLKQ9UBT6 870 aa11.32□□□□□ -0.6
H2AFY-216ENST00000511494 THRAP3Q9Y2W1 955 aaKnown RBP11.32□□□□□ -0.6
H2AFY-216ENST00000511494 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
H2AFY-216ENST00000511494 CC2D1BQ5T0F9 858 aaKnown RBP11.31□□□□□ -0.6
H2AFY-216ENST00000511494 A0A0G2JS52 829 aa11.31□□□□□ -0.6
H2AFY-216ENST00000511494 PPM1GO15355 546 aaPredicted RBP11.31□□□□□ -0.6
H2AFY-216ENST00000511494 HSP90AB2PQ58FF8 381 aa11.31□□□□□ -0.6
H2AFY-216ENST00000511494 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
H2AFY-216ENST00000511494 RGPD5Q99666 1765 aa11.3□□□□□ -0.6
H2AFY-216ENST00000511494 KIF24Q5T7B8 1368 aa11.29□□□□□ -0.6
H2AFY-216ENST00000511494 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
H2AFY-216ENST00000511494 FLT4P35916 1363 aa11.29□□□□□ -0.6
H2AFY-216ENST00000511494 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
H2AFY-216ENST00000511494 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
H2AFY-216ENST00000511494 KRT27Q7Z3Y8 459 aa11.29□□□□□ -0.6
H2AFY-216ENST00000511494 INSRP06213 1382 aa11.28□□□□□ -0.6
H2AFY-216ENST00000511494 PEAK1Q9H792 1746 aa11.28□□□□□ -0.6
H2AFY-216ENST00000511494 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.6
H2AFY-216ENST00000511494 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.61
H2AFY-216ENST00000511494 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
H2AFY-216ENST00000511494 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
H2AFY-216ENST00000511494 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
H2AFY-216ENST00000511494 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
H2AFY-216ENST00000511494 DISP2A7MBM2 1401 aa11.25□□□□□ -0.61
H2AFY-216ENST00000511494 SMG6Q86US8 1419 aaKnown RBP11.25□□□□□ -0.61
H2AFY-216ENST00000511494 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
H2AFY-216ENST00000511494 FAM182BQ5T319 152 aa11.25□□□□□ -0.61
H2AFY-216ENST00000511494 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
H2AFY-216ENST00000511494 MAP2P11137 1827 aaKnown RBP11.24□□□□□ -0.61
H2AFY-216ENST00000511494 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
H2AFY-216ENST00000511494 IL2RBP14784 551 aa11.24□□□□□ -0.61
H2AFY-216ENST00000511494 MTHFSP49914 203 aa11.24□□□□□ -0.61
H2AFY-216ENST00000511494 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
H2AFY-216ENST00000511494 DDB1Q16531 1140 aa11.24□□□□□ -0.61
H2AFY-216ENST00000511494 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
H2AFY-216ENST00000511494 EXOC5O00471 708 aa11.23□□□□□ -0.61
H2AFY-216ENST00000511494 EYA1Q99502 592 aa11.23□□□□□ -0.61
H2AFY-216ENST00000511494 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
H2AFY-216ENST00000511494 FAM208AQ9UK61 1670 aaKnown RBP11.21□□□□□ -0.61
H2AFY-216ENST00000511494 MARCH10Q8NA82 808 aaPredicted RBP11.21□□□□□ -0.61
H2AFY-216ENST00000511494 IL13P35225 146 aa11.2□□□□□ -0.62
H2AFY-216ENST00000511494 FAM196AQ6ZSG2 479 aa11.2□□□□□ -0.62
H2AFY-216ENST00000511494 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
H2AFY-216ENST00000511494 RGPD2P0DJD1 1756 aa11.2□□□□□ -0.62
H2AFY-216ENST00000511494 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
H2AFY-216ENST00000511494 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
H2AFY-216ENST00000511494 WNK3Q9BYP7 1800 aa11.2□□□□□ -0.62
H2AFY-216ENST00000511494 KCNA4P22459 653 aa11.19□□□□□ -0.62
H2AFY-216ENST00000511494 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
H2AFY-216ENST00000511494 NCAPD2Q15021 1401 aa11.19□□□□□ -0.62
H2AFY-216ENST00000511494 TATP17735 454 aaPredicted RBP11.19□□□□□ -0.62
H2AFY-216ENST00000511494 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
H2AFY-216ENST00000511494 MEGF6O75095 1541 aa11.19□□□□□ -0.62
H2AFY-216ENST00000511494 TNS2Q63HR2 1409 aa11.19□□□□□ -0.62
H2AFY-216ENST00000511494 ZCRB1Q8TBF4 217 aaKnown RBP11.18□□□□□ -0.62
H2AFY-216ENST00000511494 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
H2AFY-216ENST00000511494 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
H2AFY-216ENST00000511494 OVOS2A0A0G2JMS6 1433 aa11.18□□□□□ -0.62
H2AFY-216ENST00000511494 DDX54Q8TDD1 881 aaKnown RBP11.17□□□□□ -0.62
H2AFY-216ENST00000511494 DIAPH1O60610 1272 aaKnown RBP11.17□□□□□ -0.62
H2AFY-216ENST00000511494 TRIM37O94972 964 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms