RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 RIPK4P57078 832 aa11.77□□□□□ -0.53
SEC24D-209ENST00000509818 C19orf44Q9H6X5 657 aa11.76□□□□□ -0.53
SEC24D-209ENST00000509818 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
SEC24D-209ENST00000509818 NALCNQ8IZF0 1738 aa11.76□□□□□ -0.53
SEC24D-209ENST00000509818 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
SEC24D-209ENST00000509818 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
SEC24D-209ENST00000509818 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
SEC24D-209ENST00000509818 HMOX1P09601 288 aa11.74□□□□□ -0.53
SEC24D-209ENST00000509818 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
SEC24D-209ENST00000509818 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
SEC24D-209ENST00000509818 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
SEC24D-209ENST00000509818 BCAR3O75815 825 aa11.73□□□□□ -0.53
SEC24D-209ENST00000509818 ATF3P18847 181 aa11.73□□□□□ -0.53
SEC24D-209ENST00000509818 NLRP6P59044 892 aa11.73□□□□□ -0.53
SEC24D-209ENST00000509818 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
SEC24D-209ENST00000509818 PHLPP1O60346 1717 aa11.73□□□□□ -0.53
SEC24D-209ENST00000509818 MST1RQ04912 1400 aa11.72□□□□□ -0.53
SEC24D-209ENST00000509818 EIF4A2Q14240 407 aaKnown RBP11.72□□□□□ -0.53
SEC24D-209ENST00000509818 C20orf194Q5TEA3 1177 aa11.72□□□□□ -0.53
SEC24D-209ENST00000509818 RBM19Q9Y4C8 960 aaKnown RBP11.72□□□□□ -0.53
SEC24D-209ENST00000509818 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
SEC24D-209ENST00000509818 RARSP54136 660 aaKnown RBP11.72□□□□□ -0.53
SEC24D-209ENST00000509818 LMOD3Q0VAK6 560 aa11.72□□□□□ -0.53
SEC24D-209ENST00000509818 PDE3AQ14432 1141 aa11.72□□□□□ -0.53
SEC24D-209ENST00000509818 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
SEC24D-209ENST00000509818 PHACTR3Q96KR7 559 aa11.72□□□□□ -0.53
SEC24D-209ENST00000509818 SBNO1A3KN83 1393 aa11.72□□□□□ -0.53
SEC24D-209ENST00000509818 PIK3C2AO00443 1686 aa11.71□□□□□ -0.53
SEC24D-209ENST00000509818 FANCIQ9NVI1 1328 aa11.71□□□□□ -0.53
SEC24D-209ENST00000509818 DCCP43146 1447 aa11.71□□□□□ -0.53
SEC24D-209ENST00000509818 ESCO1Q5FWF5 840 aa11.71□□□□□ -0.53
SEC24D-209ENST00000509818 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
SEC24D-209ENST00000509818 RGS17Q9UGC6 210 aaPredicted RBP11.71□□□□□ -0.53
SEC24D-209ENST00000509818 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.54
SEC24D-209ENST00000509818 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 FLT4P35916 1363 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 PAK3O75914 559 aaPredicted RBP11.7□□□□□ -0.54
SEC24D-209ENST00000509818 AMPHP49418 695 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 PSME1Q06323 249 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 KIF24Q5T7B8 1368 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 SOX12O15370 315 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
SEC24D-209ENST00000509818 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 DDX17Q92841 729 aaKnown RBP11.7□□□□□ -0.54
SEC24D-209ENST00000509818 PEAK1Q9H792 1746 aa11.7□□□□□ -0.54
SEC24D-209ENST00000509818 AHDC1Q5TGY3 1603 aaPredicted RBP11.69□□□□□ -0.54
SEC24D-209ENST00000509818 SULT6B1Q6IMI4 303 aa11.69□□□□□ -0.54
SEC24D-209ENST00000509818 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
SEC24D-209ENST00000509818 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
SEC24D-209ENST00000509818 ARHGEF10O15013 1369 aa11.68□□□□□ -0.54
SEC24D-209ENST00000509818 SOCS7O14512 581 aa11.68□□□□□ -0.54
SEC24D-209ENST00000509818 GNAI1P63096 354 aa11.67□□□□□ -0.54
SEC24D-209ENST00000509818 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
SEC24D-209ENST00000509818 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
SEC24D-209ENST00000509818 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
SEC24D-209ENST00000509818 JCADQ9P266 1359 aa11.67□□□□□ -0.54
SEC24D-209ENST00000509818 LRP6O75581 1613 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 MS4A1P11836 297 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 AAMPQ13685 434 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 FRAT1Q92837 279 aaPredicted RBP11.66□□□□□ -0.54
SEC24D-209ENST00000509818 C1orf167Q5SNV9 1468 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 MARF1Q9Y4F3 1742 aaKnown RBP11.66□□□□□ -0.54
SEC24D-209ENST00000509818 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 ZNF428Q96B54 188 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
SEC24D-209ENST00000509818 NHSL1Q5SYE7 1610 aa11.65□□□□□ -0.54
SEC24D-209ENST00000509818 HOXC9P31274 260 aa11.65□□□□□ -0.54
SEC24D-209ENST00000509818 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
SEC24D-209ENST00000509818 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
SEC24D-209ENST00000509818 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
SEC24D-209ENST00000509818 ZNF853P0CG23 659 aa11.64□□□□□ -0.55
SEC24D-209ENST00000509818 ZKSCAN2Q63HK3 967 aa11.64□□□□□ -0.55
SEC24D-209ENST00000509818 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
SEC24D-209ENST00000509818 FOXO3O43524 673 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 ALDH1L2Q3SY69 923 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 CENPQQ7L2Z9 268 aaPredicted RBP11.63□□□□□ -0.55
SEC24D-209ENST00000509818 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 IGSF1Q8N6C5 1336 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 KIF1AQ12756 1690 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 PANK1Q8TE04 598 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 EYA1Q99502 592 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
SEC24D-209ENST00000509818 BCL2L13Q9BXK5 485 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 SMC4Q9NTJ3 1288 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 KDRP35968 1356 aa11.63□□□□□ -0.55
SEC24D-209ENST00000509818 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
SEC24D-209ENST00000509818 KRT28Q7Z3Y7 464 aa11.62□□□□□ -0.55
SEC24D-209ENST00000509818 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
SEC24D-209ENST00000509818 IP6K1Q92551 441 aa11.62□□□□□ -0.55
SEC24D-209ENST00000509818 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
SEC24D-209ENST00000509818 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
SEC24D-209ENST00000509818 KDM2BQ8NHM5 1336 aa11.61□□□□□ -0.55
SEC24D-209ENST00000509818 FAM83GA6ND36 823 aa11.61□□□□□ -0.55
SEC24D-209ENST00000509818 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
SEC24D-209ENST00000509818 DZIP1LQ8IYY4 767 aaKnown RBP11.61□□□□□ -0.55
SEC24D-209ENST00000509818 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
SEC24D-209ENST00000509818 MBIPQ9NS73 344 aa11.61□□□□□ -0.55
SEC24D-209ENST00000509818 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms