RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 PRDM11Q9NQV5 511 aa28.07■■■□□ 2.08
HOXC9-203ENST00000508190 RTL1A6NKG5 1358 aa28.06■■■□□ 2.08
HOXC9-203ENST00000508190 FLT4P35916 1363 aa28.06■■■□□ 2.08
HOXC9-203ENST00000508190 COL3A1P02461 1466 aaPredicted RBP28.06■■■□□ 2.08
HOXC9-203ENST00000508190 HOXC9P31274 260 aa28.06■■■□□ 2.08
HOXC9-203ENST00000508190 RGPD2P0DJD1 1756 aa28.06■■■□□ 2.08
HOXC9-203ENST00000508190 ABCC6O95255 1503 aa28.05■■■□□ 2.08
HOXC9-203ENST00000508190 KIF24Q5T7B8 1368 aa28.04■■■□□ 2.08
HOXC9-203ENST00000508190 FAM83GA6ND36 823 aa28.03■■■□□ 2.08
HOXC9-203ENST00000508190 HSP90AB2PQ58FF8 381 aa28.03■■■□□ 2.08
HOXC9-203ENST00000508190 IP6K1Q92551 441 aa28.02■■■□□ 2.08
HOXC9-203ENST00000508190 AXIN2Q9Y2T1 843 aa28.02■■■□□ 2.08
HOXC9-203ENST00000508190 CAMTA1Q9Y6Y1 1673 aa28.02■■■□□ 2.08
HOXC9-203ENST00000508190 NRAPQ86VF7 1730 aa28■■■□□ 2.07
HOXC9-203ENST00000508190 NWD2Q9ULI1 1742 aa28■■■□□ 2.07
HOXC9-203ENST00000508190 INSRP06213 1382 aa27.99■■■□□ 2.07
HOXC9-203ENST00000508190 BLMP54132 1417 aaPredicted RBP27.98■■■□□ 2.07
HOXC9-203ENST00000508190 CFAP53Q96M91 514 aa27.98■■■□□ 2.07
HOXC9-203ENST00000508190 MRS2Q9HD23 443 aa27.98■■■□□ 2.07
HOXC9-203ENST00000508190 CCER2I3L3R5 266 aa27.97■■■□□ 2.07
HOXC9-203ENST00000508190 LTV1Q96GA3 475 aaPredicted RBP27.96■■■□□ 2.07
HOXC9-203ENST00000508190 FAM208AQ9UK61 1670 aaKnown RBP27.96■■■□□ 2.07
HOXC9-203ENST00000508190 RGPD1P0DJD0 1748 aa27.96■■■□□ 2.07
HOXC9-203ENST00000508190 COL5A2P05997 1499 aaPredicted RBP27.95■■■□□ 2.06
HOXC9-203ENST00000508190 EIF4A2Q14240 407 aaKnown RBP27.94■■■□□ 2.06
HOXC9-203ENST00000508190 MEX3CQ5U5Q3 659 aaKnown RBP27.94■■■□□ 2.06
HOXC9-203ENST00000508190 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
HOXC9-203ENST00000508190 ILDR1Q86SU0 546 aaPredicted RBP27.93■■■□□ 2.06
HOXC9-203ENST00000508190 BTG4Q9NY30 223 aa27.93■■■□□ 2.06
HOXC9-203ENST00000508190 SLIT2O94813 1529 aa27.93■■■□□ 2.06
HOXC9-203ENST00000508190 DIAPH1O60610 1272 aaKnown RBP27.92■■■□□ 2.06
HOXC9-203ENST00000508190 IL13P35225 146 aa27.92■■■□□ 2.06
HOXC9-203ENST00000508190 ANKRD24Q8TF21 1146 aa27.92■■■□□ 2.06
HOXC9-203ENST00000508190 ERBB3P21860 1342 aa27.91■■■□□ 2.06
HOXC9-203ENST00000508190 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.89■■■□□ 2.06
HOXC9-203ENST00000508190 NGLY1Q96IV0 654 aa27.89■■■□□ 2.06
HOXC9-203ENST00000508190 STRN4Q9NRL3 753 aa27.88■■■□□ 2.05
HOXC9-203ENST00000508190 U2SURPO15042 1029 aaKnown RBP27.85■■■□□ 2.05
HOXC9-203ENST00000508190 CSB-PGBD3P0DP91 1061 aa27.85■■■□□ 2.05
HOXC9-203ENST00000508190 BCL9LQ86UU0 1499 aa27.85■■■□□ 2.05
HOXC9-203ENST00000508190 EVA1CP58658 441 aa27.84■■■□□ 2.05
HOXC9-203ENST00000508190 PNISRQ8TF01 805 aaKnown RBP27.84■■■□□ 2.05
HOXC9-203ENST00000508190 EYA1Q99502 592 aa27.84■■■□□ 2.05
HOXC9-203ENST00000508190 WDR17Q8IZU2 1322 aa27.84■■■□□ 2.05
HOXC9-203ENST00000508190 LARP1Q6PKG0 1096 aaKnown RBP27.83■■■□□ 2.05
HOXC9-203ENST00000508190 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
HOXC9-203ENST00000508190 NBPF6Q5VWK0 638 aa27.82■■■□□ 2.04
HOXC9-203ENST00000508190 FNBP4Q8N3X1 1017 aaPredicted RBP27.82■■■□□ 2.04
HOXC9-203ENST00000508190 NBPF4Q96M43 638 aa27.82■■■□□ 2.04
HOXC9-203ENST00000508190 AFF2P51816 1311 aa27.82■■■□□ 2.04
HOXC9-203ENST00000508190 WDR43Q15061 677 aaKnown RBP eCLIP27.82■■■□□ 2.04
HOXC9-203ENST00000508190 USHBP1Q8N6Y0 703 aa27.82■■■□□ 2.04
HOXC9-203ENST00000508190 IGSF1Q8N6C5 1336 aa27.81■■■□□ 2.04
HOXC9-203ENST00000508190 WNK3Q9BYP7 1800 aa27.81■■■□□ 2.04
HOXC9-203ENST00000508190 U2AF1L5P0DN76 240 aaPredicted RBP27.81■■■□□ 2.04
HOXC9-203ENST00000508190 U2AF1Q01081 240 aaKnown RBP eCLIP27.81■■■□□ 2.04
HOXC9-203ENST00000508190 NLRP2Q9NX02 1062 aa27.81■■■□□ 2.04
HOXC9-203ENST00000508190 TOM1L2Q6ZVM7 507 aa27.79■■■□□ 2.04
HOXC9-203ENST00000508190 UNC5CLQ8IV45 518 aa27.79■■■□□ 2.04
HOXC9-203ENST00000508190 FAM9BQ8IZU0 186 aa27.79■■■□□ 2.04
HOXC9-203ENST00000508190 CRB1P82279 1406 aa27.79■■■□□ 2.04
HOXC9-203ENST00000508190 NCAPD2Q15021 1401 aa27.78■■■□□ 2.04
HOXC9-203ENST00000508190 HMOX1P09601 288 aa27.78■■■□□ 2.04
HOXC9-203ENST00000508190 AEBP1Q8IUX7 1158 aa27.78■■■□□ 2.04
HOXC9-203ENST00000508190 USP21Q9UK80 565 aa27.78■■■□□ 2.04
HOXC9-203ENST00000508190 ADAMTS8Q9UP79 889 aa27.77■■■□□ 2.04
HOXC9-203ENST00000508190 SULT6B1Q6IMI4 303 aa27.76■■■□□ 2.03
HOXC9-203ENST00000508190 CARD10Q9BWT7 1032 aa27.73■■■□□ 2.03
HOXC9-203ENST00000508190 USP35Q9P2H5 1018 aa27.73■■■□□ 2.03
HOXC9-203ENST00000508190 KDRP35968 1356 aa27.73■■■□□ 2.03
HOXC9-203ENST00000508190 PARP4Q9UKK3 1724 aaKnown RBP27.72■■■□□ 2.03
HOXC9-203ENST00000508190 RSPH6AQ9H0K4 717 aa27.72■■■□□ 2.03
HOXC9-203ENST00000508190 CCDC9Q9Y3X0 531 aaKnown RBP27.71■■■□□ 2.03
HOXC9-203ENST00000508190 ATRNO75882 1429 aa27.7■■■□□ 2.02
HOXC9-203ENST00000508190 SPATA31A1Q5TZJ5 1347 aa27.7■■■□□ 2.02
HOXC9-203ENST00000508190 SPATA31A5Q5VU36 1347 aa27.7■■■□□ 2.02
HOXC9-203ENST00000508190 SPATA31A7Q8IWB4 1347 aa27.7■■■□□ 2.02
HOXC9-203ENST00000508190 VPS72Q15906 364 aa27.7■■■□□ 2.02
HOXC9-203ENST00000508190 GLI3P10071 1580 aa27.7■■■□□ 2.02
HOXC9-203ENST00000508190 CCDC146Q8IYE0 955 aa27.69■■■□□ 2.02
HOXC9-203ENST00000508190 MEGF6O75095 1541 aa27.69■■■□□ 2.02
HOXC9-203ENST00000508190 PRKAR2BP31323 418 aa27.68■■■□□ 2.02
HOXC9-203ENST00000508190 FCHSD2O94868 740 aa27.67■■■□□ 2.02
HOXC9-203ENST00000508190 DLG5Q8TDM6 1919 aa27.67■■■□□ 2.02
HOXC9-203ENST00000508190 PKD1L3Q7Z443 1732 aa27.66■■■□□ 2.02
HOXC9-203ENST00000508190 PLEKHF1Q96S99 279 aa27.65■■■□□ 2.02
HOXC9-203ENST00000508190 TRPC5Q9UL62 973 aaPredicted RBP27.65■■■□□ 2.02
HOXC9-203ENST00000508190 SHANK3Q9BYB0 1731 aa27.65■■■□□ 2.02
HOXC9-203ENST00000508190 TCP11L2Q8N4U5 519 aa27.64■■■□□ 2.02
HOXC9-203ENST00000508190 QTRT2Q9H974 415 aaKnown RBP27.63■■■□□ 2.01
HOXC9-203ENST00000508190 DISP2A7MBM2 1401 aa27.63■■■□□ 2.01
HOXC9-203ENST00000508190 ZNF772Q68DY9 489 aaPredicted RBP27.62■■■□□ 2.01
HOXC9-203ENST00000508190 RAPGEF4Q8WZA2 1011 aa27.62■■■□□ 2.01
HOXC9-203ENST00000508190 PHACTR3Q96KR7 559 aa27.62■■■□□ 2.01
HOXC9-203ENST00000508190 RGS17Q9UGC6 210 aaPredicted RBP27.62■■■□□ 2.01
HOXC9-203ENST00000508190 VIRMAQ69YN4 1812 aaKnown RBP27.61■■■□□ 2.01
HOXC9-203ENST00000508190 SENP3-EIF4A1A0A087X0R7 540 aa27.61■■■□□ 2.01
HOXC9-203ENST00000508190 RUNDC1Q96C34 613 aa27.61■■■□□ 2.01
HOXC9-203ENST00000508190 GJD4Q96KN9 370 aaPredicted RBP27.61■■■□□ 2.01
HOXC9-203ENST00000508190 LRRC37A3O60309 1634 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms