RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 COG3Q96JB2 828 aa18.8■□□□□ 0.6
PDCD6-204ENST00000506909 CARD14Q9BXL6 1004 aa18.8■□□□□ 0.6
PDCD6-204ENST00000506909 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
PDCD6-204ENST00000506909 AXIN2Q9Y2T1 843 aa18.79■□□□□ 0.6
PDCD6-204ENST00000506909 THSD7AQ9UPZ6 1657 aa18.79■□□□□ 0.6
PDCD6-204ENST00000506909 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
PDCD6-204ENST00000506909 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
PDCD6-204ENST00000506909 POLR3GLQ9BT43 218 aa18.78■□□□□ 0.6
PDCD6-204ENST00000506909 CRB1P82279 1406 aa18.77■□□□□ 0.6
PDCD6-204ENST00000506909 FAM98CQ17RN3 349 aaKnown RBP18.77■□□□□ 0.6
PDCD6-204ENST00000506909 NSD3Q9BZ95 1437 aa18.76■□□□□ 0.59
PDCD6-204ENST00000506909 BARGINQ6ZT62 677 aa18.76■□□□□ 0.59
PDCD6-204ENST00000506909 THRAP3Q9Y2W1 955 aaKnown RBP18.75■□□□□ 0.59
PDCD6-204ENST00000506909 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
PDCD6-204ENST00000506909 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
PDCD6-204ENST00000506909 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
PDCD6-204ENST00000506909 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
PDCD6-204ENST00000506909 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
PDCD6-204ENST00000506909 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
PDCD6-204ENST00000506909 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
PDCD6-204ENST00000506909 A0A0G2JS52 829 aa18.73■□□□□ 0.59
PDCD6-204ENST00000506909 MYT1Q01538 1121 aa18.73■□□□□ 0.59
PDCD6-204ENST00000506909 KIF7Q2M1P5 1343 aa18.73■□□□□ 0.59
PDCD6-204ENST00000506909 PARP4Q9UKK3 1724 aaKnown RBP18.72■□□□□ 0.59
PDCD6-204ENST00000506909 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
PDCD6-204ENST00000506909 PANK3Q9H999 370 aa18.72■□□□□ 0.59
PDCD6-204ENST00000506909 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
PDCD6-204ENST00000506909 TOM1L2Q6ZVM7 507 aa18.71■□□□□ 0.59
PDCD6-204ENST00000506909 BLMP54132 1417 aaPredicted RBP18.71■□□□□ 0.59
PDCD6-204ENST00000506909 FAM208AQ9UK61 1670 aaKnown RBP18.7■□□□□ 0.58
PDCD6-204ENST00000506909 IP6K1Q92551 441 aa18.7■□□□□ 0.58
PDCD6-204ENST00000506909 ERBB3P21860 1342 aa18.7■□□□□ 0.58
PDCD6-204ENST00000506909 MAP3K19Q56UN5 1328 aa18.7■□□□□ 0.58
PDCD6-204ENST00000506909 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
PDCD6-204ENST00000506909 CSB-PGBD3P0DP91 1061 aa18.68■□□□□ 0.58
PDCD6-204ENST00000506909 FBLN1P23142 703 aa18.68■□□□□ 0.58
PDCD6-204ENST00000506909 EP400Q96L91 3159 aa18.68■□□□□ 0.58
PDCD6-204ENST00000506909 CCDC125Q86Z20 511 aa18.67■□□□□ 0.58
PDCD6-204ENST00000506909 RGPD2P0DJD1 1756 aa18.67■□□□□ 0.58
PDCD6-204ENST00000506909 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
PDCD6-204ENST00000506909 HOXC9P31274 260 aa18.66■□□□□ 0.58
PDCD6-204ENST00000506909 AMPHP49418 695 aa18.66■□□□□ 0.58
PDCD6-204ENST00000506909 KIF24Q5T7B8 1368 aa18.66■□□□□ 0.58
PDCD6-204ENST00000506909 CCDC7Q96M83 1385 aa18.66■□□□□ 0.58
PDCD6-204ENST00000506909 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
PDCD6-204ENST00000506909 ANKRD24Q8TF21 1146 aa18.65■□□□□ 0.58
PDCD6-204ENST00000506909 CDCA7Q9BWT1 371 aaPredicted RBP18.65■□□□□ 0.58
PDCD6-204ENST00000506909 LRRC37A3O60309 1634 aa18.64■□□□□ 0.57
PDCD6-204ENST00000506909 PEAK1Q9H792 1746 aa18.64■□□□□ 0.57
PDCD6-204ENST00000506909 NSD2O96028 1365 aa18.64■□□□□ 0.57
PDCD6-204ENST00000506909 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
PDCD6-204ENST00000506909 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
PDCD6-204ENST00000506909 KNSTRNQ9Y448 316 aa18.62■□□□□ 0.57
PDCD6-204ENST00000506909 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
PDCD6-204ENST00000506909 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
PDCD6-204ENST00000506909 RGPD1P0DJD0 1748 aa18.62■□□□□ 0.57
PDCD6-204ENST00000506909 SBF2Q86WG5 1849 aa18.6■□□□□ 0.57
PDCD6-204ENST00000506909 FLT4P35916 1363 aa18.6■□□□□ 0.57
PDCD6-204ENST00000506909 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
PDCD6-204ENST00000506909 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
PDCD6-204ENST00000506909 INSRP06213 1382 aa18.59■□□□□ 0.57
PDCD6-204ENST00000506909 PER1O15534 1290 aaPredicted RBP18.59■□□□□ 0.57
PDCD6-204ENST00000506909 DDB1Q16531 1140 aa18.59■□□□□ 0.57
PDCD6-204ENST00000506909 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
PDCD6-204ENST00000506909 HSP90AB2PQ58FF8 381 aa18.58■□□□□ 0.56
PDCD6-204ENST00000506909 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
PDCD6-204ENST00000506909 IL2RBP14784 551 aa18.57■□□□□ 0.56
PDCD6-204ENST00000506909 AMER1Q5JTC6 1135 aaPredicted RBP18.57■□□□□ 0.56
PDCD6-204ENST00000506909 TNS1Q9HBL0 1735 aaKnown RBP18.57■□□□□ 0.56
PDCD6-204ENST00000506909 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
PDCD6-204ENST00000506909 EXOC5O00471 708 aa18.56■□□□□ 0.56
PDCD6-204ENST00000506909 SF3B2Q13435 895 aaKnown RBP18.56■□□□□ 0.56
PDCD6-204ENST00000506909 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
PDCD6-204ENST00000506909 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
PDCD6-204ENST00000506909 KAT6BQ8WYB5 2073 aa18.54■□□□□ 0.56
PDCD6-204ENST00000506909 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
PDCD6-204ENST00000506909 TNS2Q63HR2 1409 aa18.54■□□□□ 0.56
PDCD6-204ENST00000506909 PPM1GO15355 546 aaPredicted RBP18.53■□□□□ 0.56
PDCD6-204ENST00000506909 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
PDCD6-204ENST00000506909 NBPF6Q5VWK0 638 aa18.53■□□□□ 0.56
PDCD6-204ENST00000506909 NBPF4Q96M43 638 aa18.53■□□□□ 0.56
PDCD6-204ENST00000506909 NPC1L1Q9UHC9 1359 aa18.53■□□□□ 0.56
PDCD6-204ENST00000506909 BCL9O00512 1426 aa18.52■□□□□ 0.56
PDCD6-204ENST00000506909 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
PDCD6-204ENST00000506909 SHANK3Q9BYB0 1731 aa18.5■□□□□ 0.55
PDCD6-204ENST00000506909 TRIM37O94972 964 aa18.5■□□□□ 0.55
PDCD6-204ENST00000506909 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
PDCD6-204ENST00000506909 BAG6P46379 1132 aa18.49■□□□□ 0.55
PDCD6-204ENST00000506909 IFFO2Q5TF58 517 aa18.49■□□□□ 0.55
PDCD6-204ENST00000506909 DEFB132Q7Z7B7 95 aa18.49■□□□□ 0.55
PDCD6-204ENST00000506909 NCAPD2Q15021 1401 aa18.48■□□□□ 0.55
PDCD6-204ENST00000506909 MEGF6O75095 1541 aa18.47■□□□□ 0.55
PDCD6-204ENST00000506909 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.55
PDCD6-204ENST00000506909 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
PDCD6-204ENST00000506909 RAPGEF4Q8WZA2 1011 aa18.46■□□□□ 0.55
PDCD6-204ENST00000506909 RGPD3A6NKT7 1758 aaPredicted RBP18.45■□□□□ 0.54
PDCD6-204ENST00000506909 RGPD4Q7Z3J3 1758 aa18.45■□□□□ 0.54
PDCD6-204ENST00000506909 EIF4A2Q14240 407 aaKnown RBP18.45■□□□□ 0.54
PDCD6-204ENST00000506909 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
PDCD6-204ENST00000506909 PKD1L3Q7Z443 1732 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms