RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.7□□□□□ -0.86
NUP54-204ENST00000506098 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
NUP54-204ENST00000506098 ARHGEF25Q86VW2 580 aa9.7□□□□□ -0.86
NUP54-204ENST00000506098 MAP3K19Q56UN5 1328 aa9.7□□□□□ -0.86
NUP54-204ENST00000506098 FLT4P35916 1363 aa9.69□□□□□ -0.86
NUP54-204ENST00000506098 RRS1Q15050 365 aaKnown RBP9.69□□□□□ -0.86
NUP54-204ENST00000506098 JCADQ9P266 1359 aa9.69□□□□□ -0.86
NUP54-204ENST00000506098 EMILIN1Q9Y6C2 1016 aa9.69□□□□□ -0.86
NUP54-204ENST00000506098 BLMP54132 1417 aaPredicted RBP9.68□□□□□ -0.86
NUP54-204ENST00000506098 CABLES1Q8TDN4 633 aa9.68□□□□□ -0.86
NUP54-204ENST00000506098 IP6K1Q92551 441 aa9.68□□□□□ -0.86
NUP54-204ENST00000506098 MRS2Q9HD23 443 aa9.68□□□□□ -0.86
NUP54-204ENST00000506098 HOXC9P31274 260 aa9.67□□□□□ -0.86
NUP54-204ENST00000506098 PNISRQ8TF01 805 aaKnown RBP9.67□□□□□ -0.86
NUP54-204ENST00000506098 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
NUP54-204ENST00000506098 SOX12O15370 315 aa9.66□□□□□ -0.86
NUP54-204ENST00000506098 HSPA1LP34931 641 aa9.66□□□□□ -0.86
NUP54-204ENST00000506098 AMPHP49418 695 aa9.66□□□□□ -0.86
NUP54-204ENST00000506098 PARP4Q9UKK3 1724 aaKnown RBP9.65□□□□□ -0.86
NUP54-204ENST00000506098 KIAA0232Q92628 1395 aa9.65□□□□□ -0.86
NUP54-204ENST00000506098 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
NUP54-204ENST00000506098 ZC3H6P61129 1189 aaKnown RBP9.65□□□□□ -0.86
NUP54-204ENST00000506098 HSP90AB2PQ58FF8 381 aa9.65□□□□□ -0.86
NUP54-204ENST00000506098 FBXO41Q8TF61 875 aa9.65□□□□□ -0.86
NUP54-204ENST00000506098 NCAPD2Q15021 1401 aa9.65□□□□□ -0.87
NUP54-204ENST00000506098 PPM1GO15355 546 aaPredicted RBP9.64□□□□□ -0.87
NUP54-204ENST00000506098 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
NUP54-204ENST00000506098 IL13P35225 146 aa9.64□□□□□ -0.87
NUP54-204ENST00000506098 PKD1L3Q7Z443 1732 aa9.64□□□□□ -0.87
NUP54-204ENST00000506098 SHANK3Q9BYB0 1731 aa9.63□□□□□ -0.87
NUP54-204ENST00000506098 EIF4A2Q14240 407 aaKnown RBP9.63□□□□□ -0.87
NUP54-204ENST00000506098 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
NUP54-204ENST00000506098 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
NUP54-204ENST00000506098 COL5A2P05997 1499 aaPredicted RBP9.63□□□□□ -0.87
NUP54-204ENST00000506098 KAT6BQ8WYB5 2073 aa9.63□□□□□ -0.87
NUP54-204ENST00000506098 LRP6O75581 1613 aa9.63□□□□□ -0.87
NUP54-204ENST00000506098 SLIT2O94813 1529 aa9.62□□□□□ -0.87
NUP54-204ENST00000506098 FAM83GA6ND36 823 aa9.62□□□□□ -0.87
NUP54-204ENST00000506098 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
NUP54-204ENST00000506098 PRDM11Q9NQV5 511 aa9.62□□□□□ -0.87
NUP54-204ENST00000506098 KDRP35968 1356 aa9.62□□□□□ -0.87
NUP54-204ENST00000506098 ERBB3P21860 1342 aa9.61□□□□□ -0.87
NUP54-204ENST00000506098 IGSF1Q8N6C5 1336 aa9.61□□□□□ -0.87
NUP54-204ENST00000506098 SCN11AQ9UI33 1791 aa9.61□□□□□ -0.87
NUP54-204ENST00000506098 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
NUP54-204ENST00000506098 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
NUP54-204ENST00000506098 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
NUP54-204ENST00000506098 FAM9BQ8IZU0 186 aa9.61□□□□□ -0.87
NUP54-204ENST00000506098 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
NUP54-204ENST00000506098 ANKRD24Q8TF21 1146 aa9.6□□□□□ -0.87
NUP54-204ENST00000506098 EYA1Q99502 592 aa9.6□□□□□ -0.87
NUP54-204ENST00000506098 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
NUP54-204ENST00000506098 FCHSD2O94868 740 aa9.59□□□□□ -0.87
NUP54-204ENST00000506098 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
NUP54-204ENST00000506098 SIPA1L3O60292 1781 aaPredicted RBP9.59□□□□□ -0.87
NUP54-204ENST00000506098 PLEKHG2Q9H7P9 1386 aa9.59□□□□□ -0.87
NUP54-204ENST00000506098 ITGB4P16144 1822 aa9.59□□□□□ -0.88
NUP54-204ENST00000506098 WDR17Q8IZU2 1322 aa9.58□□□□□ -0.88
NUP54-204ENST00000506098 NUTM2BA6NNL0 878 aaPredicted RBP9.58□□□□□ -0.88
NUP54-204ENST00000506098 NUTM2EB1AL46 878 aaPredicted RBP9.58□□□□□ -0.88
NUP54-204ENST00000506098 U2SURPO15042 1029 aaKnown RBP9.58□□□□□ -0.88
NUP54-204ENST00000506098 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
NUP54-204ENST00000506098 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
NUP54-204ENST00000506098 NBPF6Q5VWK0 638 aa9.58□□□□□ -0.88
NUP54-204ENST00000506098 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
NUP54-204ENST00000506098 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
NUP54-204ENST00000506098 NBPF4Q96M43 638 aa9.58□□□□□ -0.88
NUP54-204ENST00000506098 PLEKHF1Q96S99 279 aa9.58□□□□□ -0.88
NUP54-204ENST00000506098 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
NUP54-204ENST00000506098 ADAMTS7Q9UKP4 1686 aa9.58□□□□□ -0.88
NUP54-204ENST00000506098 CRB1P82279 1406 aa9.57□□□□□ -0.88
NUP54-204ENST00000506098 BRWD3Q6RI45 1802 aa9.57□□□□□ -0.88
NUP54-204ENST00000506098 ADAMTS2O95450 1211 aa9.57□□□□□ -0.88
NUP54-204ENST00000506098 NCBP3Q53F19 620 aaKnown RBP9.57□□□□□ -0.88
NUP54-204ENST00000506098 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
NUP54-204ENST00000506098 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
NUP54-204ENST00000506098 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
NUP54-204ENST00000506098 BTG4Q9NY30 223 aa9.57□□□□□ -0.88
NUP54-204ENST00000506098 BCL9LQ86UU0 1499 aa9.57□□□□□ -0.88
NUP54-204ENST00000506098 CACNA1FO60840 1977 aa9.57□□□□□ -0.88
NUP54-204ENST00000506098 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
NUP54-204ENST00000506098 SULT6B1Q6IMI4 303 aa9.56□□□□□ -0.88
NUP54-204ENST00000506098 CARD10Q9BWT7 1032 aa9.56□□□□□ -0.88
NUP54-204ENST00000506098 HMOX1P09601 288 aa9.55□□□□□ -0.88
NUP54-204ENST00000506098 EVA1CP58658 441 aa9.55□□□□□ -0.88
NUP54-204ENST00000506098 NGEFQ8N5V2 710 aa9.55□□□□□ -0.88
NUP54-204ENST00000506098 THSD7AQ9UPZ6 1657 aa9.55□□□□□ -0.88
NUP54-204ENST00000506098 LRRC37A3O60309 1634 aa9.54□□□□□ -0.88
NUP54-204ENST00000506098 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
NUP54-204ENST00000506098 LARP1Q6PKG0 1096 aaKnown RBP9.54□□□□□ -0.88
NUP54-204ENST00000506098 AEBP1Q8IUX7 1158 aa9.54□□□□□ -0.88
NUP54-204ENST00000506098 UNC5CLQ8IV45 518 aa9.54□□□□□ -0.88
NUP54-204ENST00000506098 NGLY1Q96IV0 654 aa9.54□□□□□ -0.88
NUP54-204ENST00000506098 GLI3P10071 1580 aa9.54□□□□□ -0.88
NUP54-204ENST00000506098 MEGF6O75095 1541 aa9.53□□□□□ -0.88
NUP54-204ENST00000506098 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
NUP54-204ENST00000506098 TOM1L2Q6ZVM7 507 aa9.53□□□□□ -0.88
NUP54-204ENST00000506098 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
NUP54-204ENST00000506098 USHBP1Q8N6Y0 703 aa9.53□□□□□ -0.88
NUP54-204ENST00000506098 PHACTR3Q96KR7 559 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms