RNA–Protein interactions for RNA: ENST00000503407.5

ACSL1-203, Transcript of acyl-CoA synthetase long chain family member 1, human

TSL 2

Gene ACSL1, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSL1-203	ENST00000503407	PHF23	Q9BUL5	403 aa	Predicted RBP	13.72	□□□□□ -0.21
ACSL1-203	ENST00000503407	LMBRD1	Q9NUN5	540 aa		13.72	□□□□□ -0.21
ACSL1-203	ENST00000503407	AK9	Q5TCS8	1911 aa		13.72	□□□□□ -0.21
ACSL1-203	ENST00000503407	MYO5B	Q9ULV0	1848 aa		13.72	□□□□□ -0.21
ACSL1-203	ENST00000503407	GTF2E1	P29083	439 aa	Predicted RBP	13.72	□□□□□ -0.21
ACSL1-203	ENST00000503407	NEUROD2	Q15784	382 aa		13.72	□□□□□ -0.21
ACSL1-203	ENST00000503407	ERVK-7	P63135	1459 aa		13.72	□□□□□ -0.21
ACSL1-203	ENST00000503407	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.71	□□□□□ -0.21
ACSL1-203	ENST00000503407	POLR3A	O14802	1390 aa	Predicted RBP	13.71	□□□□□ -0.21
ACSL1-203	ENST00000503407	RUNDC1	Q96C34	613 aa		13.7	□□□□□ -0.22
ACSL1-203	ENST00000503407	NUCB2	P80303	420 aa		13.7	□□□□□ -0.22
ACSL1-203	ENST00000503407	CBX1	P83916	185 aa		13.7	□□□□□ -0.22
ACSL1-203	ENST00000503407	RRP7A	Q9Y3A4	280 aa	Known RBP	13.7	□□□□□ -0.22
ACSL1-203	ENST00000503407	ZNF710	Q8N1W2	664 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	PRIMPOL	Q96LW4	560 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	SLC52A1	Q9NWF4	448 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	DDX19B	Q9UMR2	479 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	NUCB1	Q02818	461 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	KIAA2012	Q0VF49	1180 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	BMP2KL	Q5H9B9	411 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	GGT6	Q6P531	493 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	LRSAM1	Q6UWE0	723 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	TCP11L2	Q8N4U5	519 aa		13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	RBM42	Q9BTD8	480 aa	Known RBP	13.69	□□□□□ -0.22
ACSL1-203	ENST00000503407	IQSEC2	Q5JU85	1478 aa		13.68	□□□□□ -0.22
ACSL1-203	ENST00000503407	USP32	Q8NFA0	1604 aa		13.68	□□□□□ -0.22
ACSL1-203	ENST00000503407	KIF16B	Q96L93	1317 aa		13.68	□□□□□ -0.22
ACSL1-203	ENST00000503407	FER1L4	A9Z1Z3	1794 aa		13.68	□□□□□ -0.22
ACSL1-203	ENST00000503407	CYP2E1	P05181	493 aa	Predicted RBP	13.68	□□□□□ -0.22
ACSL1-203	ENST00000503407	HMGN5	P82970	282 aa	Known RBP	13.68	□□□□□ -0.22
ACSL1-203	ENST00000503407	CCDC27	Q2M243	656 aa		13.68	□□□□□ -0.22
ACSL1-203	ENST00000503407	RIMS1	Q86UR5	1692 aa	Known RBP	13.66	□□□□□ -0.22
ACSL1-203	ENST00000503407	SHPRH	Q149N8	1683 aa		13.66	□□□□□ -0.22
ACSL1-203	ENST00000503407	ATP2B3	Q16720	1220 aa		13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	ITPRIP	Q8IWB1	547 aa		13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	GPT2	Q8TD30	523 aa		13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	LNPK	Q9C0E8	428 aa		13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	RBM27	Q9P2N5	1060 aa	Known RBP	13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	CT47B1	P0C2W7	299 aa	Predicted RBP	13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	TRIM27	P14373	513 aa		13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	CHD1L	Q86WJ1	897 aa		13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	JARID2	Q92833	1246 aa	Predicted RBP	13.65	□□□□□ -0.22
ACSL1-203	ENST00000503407	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
ACSL1-203	ENST00000503407	ADGRF5	Q8IZF2	1346 aa		13.64	□□□□□ -0.23
ACSL1-203	ENST00000503407	PRPF40A	O75400	957 aa	Known RBP	13.64	□□□□□ -0.23
ACSL1-203	ENST00000503407	PTMA	P06454	111 aa	Known RBP	13.64	□□□□□ -0.23
ACSL1-203	ENST00000503407	TAF3	Q5VWG9	929 aa		13.64	□□□□□ -0.23
ACSL1-203	ENST00000503407	TSC1	Q92574	1164 aa		13.64	□□□□□ -0.23
ACSL1-203	ENST00000503407	TBC1D9	Q6ZT07	1266 aa		13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	ZBTB40	Q9NUA8	1239 aa		13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	TMEM63C	Q9P1W3	806 aa		13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	SYCE3	A1L190	88 aa		13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	NCBP3	Q53F19	620 aa	Known RBP	13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	CARD14	Q9BXL6	1004 aa		13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	C14orf93	Q9H972	538 aa	Known RBP	13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	SMC4	Q9NTJ3	1288 aa		13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	TMEM51	Q9NW97	253 aa		13.63	□□□□□ -0.23
ACSL1-203	ENST00000503407	SETD1A	O15047	1707 aa	Known RBP	13.62	□□□□□ -0.23
ACSL1-203	ENST00000503407	ATF7IP	Q6VMQ6	1270 aa		13.62	□□□□□ -0.23
ACSL1-203	ENST00000503407	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.62	□□□□□ -0.23
ACSL1-203	ENST00000503407	PIBF1	Q8WXW3	757 aa		13.62	□□□□□ -0.23
ACSL1-203	ENST00000503407	CWC22	Q9HCG8	908 aa	Known RBP	13.62	□□□□□ -0.23
ACSL1-203	ENST00000503407	KIF3A	Q9Y496	699 aa		13.62	□□□□□ -0.23
ACSL1-203	ENST00000503407	VGF	O15240	615 aa	Predicted RBP	13.61	□□□□□ -0.23
ACSL1-203	ENST00000503407	RABEP1	Q15276	862 aa		13.61	□□□□□ -0.23
ACSL1-203	ENST00000503407	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.61	□□□□□ -0.23
ACSL1-203	ENST00000503407	PKP1	Q13835	747 aa		13.61	□□□□□ -0.23
ACSL1-203	ENST00000503407	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ACSL1-203	ENST00000503407	PUS7	Q96PZ0	661 aa	Known RBP	13.6	□□□□□ -0.23
ACSL1-203	ENST00000503407	KNDC1	Q76NI1	1749 aa		13.6	□□□□□ -0.23
ACSL1-203	ENST00000503407	TMEM57	Q8N5G2	664 aa		13.6	□□□□□ -0.23
ACSL1-203	ENST00000503407	RNF214	Q8ND24	703 aa		13.6	□□□□□ -0.23
ACSL1-203	ENST00000503407	DLC1	Q96QB1	1528 aa		13.6	□□□□□ -0.23
ACSL1-203	ENST00000503407	PDCL2	Q8N4E4	241 aa		13.59	□□□□□ -0.23
ACSL1-203	ENST00000503407	SSH1	Q8WYL5	1049 aa		13.59	□□□□□ -0.23
ACSL1-203	ENST00000503407	BCL2L12	Q9HB09	334 aa		13.59	□□□□□ -0.23
ACSL1-203	ENST00000503407	C3	P01024	1663 aa		13.58	□□□□□ -0.23
ACSL1-203	ENST00000503407	MBD3	O95983	291 aa		13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	CFAP70	Q5T0N1	1121 aa		13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	ESF1	Q9H501	851 aa	Known RBP	13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	ZBTB7C	A1YPR0	619 aa		13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	SPDYE4	A6NLX3	237 aa		13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	MLEC	Q14165	292 aa		13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	NOB1	Q9ULX3	412 aa	Known RBP	13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.58	□□□□□ -0.24
ACSL1-203	ENST00000503407	PDIA4	P13667	645 aa	Known RBP	13.57	□□□□□ -0.24
ACSL1-203	ENST00000503407	IPO4	Q8TEX9	1081 aa	Known RBP	13.57	□□□□□ -0.24
ACSL1-203	ENST00000503407	TSPY26P	Q9H489	355 aa		13.57	□□□□□ -0.24
ACSL1-203	ENST00000503407	ZDHHC9	Q9Y397	364 aa		13.57	□□□□□ -0.24
ACSL1-203	ENST00000503407	CDC45	O75419	566 aa		13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	EXOSC9	Q06265	439 aa	Known RBP	13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	FKBP5	Q13451	457 aa	Predicted RBP	13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	ANKRD45	Q5TZF3	282 aa		13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	A2ML1	A8K2U0	1454 aa		13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	ALK	Q9UM73	1620 aa		13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	FAM177B	A6PVY3	158 aa		13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	TSR2	Q969E8	191 aa	Known RBP	13.56	□□□□□ -0.24
ACSL1-203	ENST00000503407	GCC1	Q96CN9	775 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms