RNA–Protein interactions for RNA: ENST00000503147.1

YIPF3-211, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-211ENST00000503147 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
YIPF3-211ENST00000503147 PER1O15534 1290 aaPredicted RBP17.06■□□□□ 0.32
YIPF3-211ENST00000503147 LARP1Q6PKG0 1096 aaKnown RBP17.06■□□□□ 0.32
YIPF3-211ENST00000503147 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
YIPF3-211ENST00000503147 ONECUT3O60422 494 aaPredicted RBP17.05■□□□□ 0.32
YIPF3-211ENST00000503147 GLI3P10071 1580 aa17.05■□□□□ 0.32
YIPF3-211ENST00000503147 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
YIPF3-211ENST00000503147 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
YIPF3-211ENST00000503147 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
YIPF3-211ENST00000503147 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
YIPF3-211ENST00000503147 RGS12O14924 1447 aa17.04■□□□□ 0.32
YIPF3-211ENST00000503147 MAP3K19Q56UN5 1328 aa17.03■□□□□ 0.32
YIPF3-211ENST00000503147 IP6K1Q92551 441 aa17.03■□□□□ 0.32
YIPF3-211ENST00000503147 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.32
YIPF3-211ENST00000503147 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
YIPF3-211ENST00000503147 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
YIPF3-211ENST00000503147 ABCC6O95255 1503 aa17.01■□□□□ 0.31
YIPF3-211ENST00000503147 WDR17Q8IZU2 1322 aa17■□□□□ 0.31
YIPF3-211ENST00000503147 LTN1O94822 1766 aa17■□□□□ 0.31
YIPF3-211ENST00000503147 HOXC9P31274 260 aa17■□□□□ 0.31
YIPF3-211ENST00000503147 SEPT12Q8IYM1 358 aa17■□□□□ 0.31
YIPF3-211ENST00000503147 USP35Q9P2H5 1018 aa17■□□□□ 0.31
YIPF3-211ENST00000503147 AMPHP49418 695 aa16.99■□□□□ 0.31
YIPF3-211ENST00000503147 RGPD5Q99666 1765 aa16.99■□□□□ 0.31
YIPF3-211ENST00000503147 NSD2O96028 1365 aa16.99■□□□□ 0.31
YIPF3-211ENST00000503147 CRB1P82279 1406 aa16.98■□□□□ 0.31
YIPF3-211ENST00000503147 TOM1L2Q6ZVM7 507 aa16.98■□□□□ 0.31
YIPF3-211ENST00000503147 TCP11L2Q8N4U5 519 aa16.98■□□□□ 0.31
YIPF3-211ENST00000503147 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
YIPF3-211ENST00000503147 ERBB3P21860 1342 aa16.97■□□□□ 0.31
YIPF3-211ENST00000503147 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
YIPF3-211ENST00000503147 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-211ENST00000503147 BARGINQ6ZT62 677 aa16.97■□□□□ 0.31
YIPF3-211ENST00000503147 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
YIPF3-211ENST00000503147 EMILIN1Q9Y6C2 1016 aa16.97■□□□□ 0.31
YIPF3-211ENST00000503147 EP400Q96L91 3159 aa16.97■□□□□ 0.31
YIPF3-211ENST00000503147 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.31
YIPF3-211ENST00000503147 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
YIPF3-211ENST00000503147 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.31
YIPF3-211ENST00000503147 POLKQ9UBT6 870 aa16.96■□□□□ 0.31
YIPF3-211ENST00000503147 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
YIPF3-211ENST00000503147 HSP90AB2PQ58FF8 381 aa16.95■□□□□ 0.3
YIPF3-211ENST00000503147 KIF24Q5T7B8 1368 aa16.94■□□□□ 0.3
YIPF3-211ENST00000503147 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
YIPF3-211ENST00000503147 CC2D1BQ5T0F9 858 aaKnown RBP16.94■□□□□ 0.3
YIPF3-211ENST00000503147 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
YIPF3-211ENST00000503147 LTV1Q96GA3 475 aaPredicted RBP16.94■□□□□ 0.3
YIPF3-211ENST00000503147 PEAK1Q9H792 1746 aa16.93■□□□□ 0.3
YIPF3-211ENST00000503147 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
YIPF3-211ENST00000503147 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
YIPF3-211ENST00000503147 INSRP06213 1382 aa16.92■□□□□ 0.3
YIPF3-211ENST00000503147 FLT4P35916 1363 aa16.92■□□□□ 0.3
YIPF3-211ENST00000503147 THSD7AQ9UPZ6 1657 aa16.92■□□□□ 0.3
YIPF3-211ENST00000503147 A0A0G2JS52 829 aa16.92■□□□□ 0.3
YIPF3-211ENST00000503147 PPM1GO15355 546 aaPredicted RBP16.92■□□□□ 0.3
YIPF3-211ENST00000503147 MYT1Q01538 1121 aa16.92■□□□□ 0.3
YIPF3-211ENST00000503147 KRT27Q7Z3Y8 459 aa16.91■□□□□ 0.3
YIPF3-211ENST00000503147 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
YIPF3-211ENST00000503147 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
YIPF3-211ENST00000503147 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.29
YIPF3-211ENST00000503147 NBPF4Q96M43 638 aa16.89■□□□□ 0.29
YIPF3-211ENST00000503147 DISP2A7MBM2 1401 aa16.88■□□□□ 0.29
YIPF3-211ENST00000503147 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
YIPF3-211ENST00000503147 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-211ENST00000503147 CDCA7Q9BWT1 371 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-211ENST00000503147 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
YIPF3-211ENST00000503147 FAM182BQ5T319 152 aa16.86■□□□□ 0.29
YIPF3-211ENST00000503147 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
YIPF3-211ENST00000503147 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
YIPF3-211ENST00000503147 DDB1Q16531 1140 aa16.85■□□□□ 0.29
YIPF3-211ENST00000503147 IL2RBP14784 551 aa16.84■□□□□ 0.29
YIPF3-211ENST00000503147 MTHFSP49914 203 aa16.84■□□□□ 0.29
YIPF3-211ENST00000503147 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
YIPF3-211ENST00000503147 PARP4Q9UKK3 1724 aaKnown RBP16.84■□□□□ 0.29
YIPF3-211ENST00000503147 EXOC5O00471 708 aa16.83■□□□□ 0.28
YIPF3-211ENST00000503147 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.28
YIPF3-211ENST00000503147 EYA1Q99502 592 aa16.83■□□□□ 0.28
YIPF3-211ENST00000503147 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
YIPF3-211ENST00000503147 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
YIPF3-211ENST00000503147 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
YIPF3-211ENST00000503147 MARCH10Q8NA82 808 aaPredicted RBP16.81■□□□□ 0.28
YIPF3-211ENST00000503147 IL13P35225 146 aa16.8■□□□□ 0.28
YIPF3-211ENST00000503147 FAM196AQ6ZSG2 479 aa16.8■□□□□ 0.28
YIPF3-211ENST00000503147 LRRC37A3O60309 1634 aa16.8■□□□□ 0.28
YIPF3-211ENST00000503147 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
YIPF3-211ENST00000503147 PPP2R1AP30153 589 aa16.78■□□□□ 0.28
YIPF3-211ENST00000503147 CCDC125Q86Z20 511 aa16.78■□□□□ 0.28
YIPF3-211ENST00000503147 MEGF6O75095 1541 aa16.78■□□□□ 0.28
YIPF3-211ENST00000503147 TNS2Q63HR2 1409 aa16.78■□□□□ 0.28
YIPF3-211ENST00000503147 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.28
YIPF3-211ENST00000503147 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
YIPF3-211ENST00000503147 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
YIPF3-211ENST00000503147 OVOS2A0A0G2JMS6 1433 aa16.76■□□□□ 0.27
YIPF3-211ENST00000503147 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
YIPF3-211ENST00000503147 TATP17735 454 aaPredicted RBP16.75■□□□□ 0.27
YIPF3-211ENST00000503147 BCL9O00512 1426 aa16.74■□□□□ 0.27
YIPF3-211ENST00000503147 DIAPH1O60610 1272 aaKnown RBP16.74■□□□□ 0.27
YIPF3-211ENST00000503147 TRIM37O94972 964 aa16.74■□□□□ 0.27
YIPF3-211ENST00000503147 DDX54Q8TDD1 881 aaKnown RBP16.74■□□□□ 0.27
YIPF3-211ENST00000503147 AEBP1Q8IUX7 1158 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms