RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 FOXK2Q01167 660 aa7.6□□□□□ -1.19
PSPC1-205ENST00000497722 OCSTAMPQ9BR26 566 aa7.6□□□□□ -1.19
PSPC1-205ENST00000497722 ADAMTS8Q9UP79 889 aa7.6□□□□□ -1.19
PSPC1-205ENST00000497722 SOBPA7XYQ1 873 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 MAN1A2O60476 641 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 NR3C2P08235 984 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 NR6A1Q15406 480 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 PDXDC2PQ6P474 469 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 IL27Q8NEV9 243 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
PSPC1-205ENST00000497722 FKBPLQ9UIM3 349 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 MAP4K5Q9Y4K4 846 aa7.59□□□□□ -1.19
PSPC1-205ENST00000497722 AP1G2O75843 785 aa7.58□□□□□ -1.2
PSPC1-205ENST00000497722 NR5A1Q13285 461 aa7.58□□□□□ -1.2
PSPC1-205ENST00000497722 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
PSPC1-205ENST00000497722 ZC3H4Q9UPT8 1303 aaKnown RBP7.57□□□□□ -1.2
PSPC1-205ENST00000497722 PPFIA3O75145 1194 aa7.57□□□□□ -1.2
PSPC1-205ENST00000497722 USP17L8P0C7I0 530 aa7.57□□□□□ -1.2
PSPC1-205ENST00000497722 AGERQ15109 404 aa7.57□□□□□ -1.2
PSPC1-205ENST00000497722 ERFEQ4G0M1 354 aa7.57□□□□□ -1.2
PSPC1-205ENST00000497722 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
PSPC1-205ENST00000497722 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
PSPC1-205ENST00000497722 WDR4P57081 412 aaKnown RBP7.55□□□□□ -1.2
PSPC1-205ENST00000497722 ARID5BQ14865 1188 aa7.54□□□□□ -1.2
PSPC1-205ENST00000497722 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
PSPC1-205ENST00000497722 ITPKCQ96DU7 683 aa7.54□□□□□ -1.2
PSPC1-205ENST00000497722 GPSM3Q9Y4H4 160 aa7.54□□□□□ -1.2
PSPC1-205ENST00000497722 MAGEB6P1A0A0J9YX57 407 aa7.53□□□□□ -1.2
PSPC1-205ENST00000497722 IRS1P35568 1242 aa7.53□□□□□ -1.2
PSPC1-205ENST00000497722 TMEM259Q4ZIN3 620 aa7.53□□□□□ -1.2
PSPC1-205ENST00000497722 ZFAND3Q9H8U3 227 aa7.53□□□□□ -1.2
PSPC1-205ENST00000497722 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
PSPC1-205ENST00000497722 KRT76Q01546 638 aa7.52□□□□□ -1.21
PSPC1-205ENST00000497722 SVOPQ8N4V2 548 aa7.52□□□□□ -1.21
PSPC1-205ENST00000497722 GJD4Q96KN9 370 aaPredicted RBP7.52□□□□□ -1.21
PSPC1-205ENST00000497722 CNTNAP3BQ96NU0 1288 aa7.52□□□□□ -1.21
PSPC1-205ENST00000497722 ARHGAP9Q9BRR9 750 aa7.52□□□□□ -1.21
PSPC1-205ENST00000497722 CARD14Q9BXL6 1004 aa7.52□□□□□ -1.21
PSPC1-205ENST00000497722 CNTNAP3Q9BZ76 1288 aa7.52□□□□□ -1.21
PSPC1-205ENST00000497722 FSHRP23945 695 aa7.51□□□□□ -1.21
PSPC1-205ENST00000497722 VASH1Q7L8A9 365 aaPredicted RBP7.51□□□□□ -1.21
PSPC1-205ENST00000497722 ATP1B4Q9UN42 357 aaPredicted RBP7.51□□□□□ -1.21
PSPC1-205ENST00000497722 PTK2Q05397 1052 aa7.5□□□□□ -1.21
PSPC1-205ENST00000497722 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
PSPC1-205ENST00000497722 SOCS7O14512 581 aa7.49□□□□□ -1.21
PSPC1-205ENST00000497722 GPR37L1O60883 481 aa7.49□□□□□ -1.21
PSPC1-205ENST00000497722 UPP2O95045 317 aa7.49□□□□□ -1.21
PSPC1-205ENST00000497722 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
PSPC1-205ENST00000497722 CCDC116Q8IYX3 515 aa7.49□□□□□ -1.21
PSPC1-205ENST00000497722 MEIOBQ8N635 442 aa7.49□□□□□ -1.21
PSPC1-205ENST00000497722 ADAM32Q8TC27 787 aa7.49□□□□□ -1.21
PSPC1-205ENST00000497722 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
PSPC1-205ENST00000497722 SCARF2Q96GP6 870 aaPredicted RBP7.48□□□□□ -1.21
PSPC1-205ENST00000497722 KCTD15Q96SI1 283 aaPredicted RBP7.48□□□□□ -1.21
PSPC1-205ENST00000497722 CDV3Q9UKY7 258 aaKnown RBP7.48□□□□□ -1.21
PSPC1-205ENST00000497722 ADAM23O75077 832 aa7.47□□□□□ -1.21
PSPC1-205ENST00000497722 MARSP56192 900 aaKnown RBP7.47□□□□□ -1.21
PSPC1-205ENST00000497722 ZBTB33Q86T24 672 aa7.47□□□□□ -1.21
PSPC1-205ENST00000497722 BANK1Q8NDB2 785 aa7.47□□□□□ -1.21
PSPC1-205ENST00000497722 EMILIN1Q9Y6C2 1016 aa7.47□□□□□ -1.21
PSPC1-205ENST00000497722 BMP2P12643 396 aa7.46□□□□□ -1.22
PSPC1-205ENST00000497722 INTS6LQ5JSJ4 861 aaKnown RBP7.46□□□□□ -1.22
PSPC1-205ENST00000497722 PPP1R26Q5T8A7 1209 aaPredicted RBP7.46□□□□□ -1.22
PSPC1-205ENST00000497722 Q6ZVU0 165 aa7.46□□□□□ -1.22
PSPC1-205ENST00000497722 SLC10A4Q96EP9 437 aa7.46□□□□□ -1.22
PSPC1-205ENST00000497722 COL25A1Q9BXS0 654 aaPredicted RBP7.46□□□□□ -1.22
PSPC1-205ENST00000497722 ESPNB1AK53 854 aa7.45□□□□□ -1.22
PSPC1-205ENST00000497722 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
PSPC1-205ENST00000497722 GPR161Q8N6U8 529 aaKnown RBP7.45□□□□□ -1.22
PSPC1-205ENST00000497722 MTMR14Q8NCE2 650 aa7.45□□□□□ -1.22
PSPC1-205ENST00000497722 PNMA1Q8ND90 353 aa7.45□□□□□ -1.22
PSPC1-205ENST00000497722 PRKCSHP14314 528 aaPredicted RBP7.44□□□□□ -1.22
PSPC1-205ENST00000497722 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
PSPC1-205ENST00000497722 MSTNO14793 375 aa7.43□□□□□ -1.22
PSPC1-205ENST00000497722 ARHGEF15O94989 841 aa7.43□□□□□ -1.22
PSPC1-205ENST00000497722 SLURP2P0DP57 97 aa7.43□□□□□ -1.22
PSPC1-205ENST00000497722 SNRKQ9NRH2 765 aa7.43□□□□□ -1.22
PSPC1-205ENST00000497722 SOS2Q07890 1332 aaPredicted RBP7.43□□□□□ -1.22
PSPC1-205ENST00000497722 ZBBXA8MT70 800 aa7.42□□□□□ -1.22
PSPC1-205ENST00000497722 FBXO45P0C2W1 286 aa7.42□□□□□ -1.22
PSPC1-205ENST00000497722 CBLBQ13191 982 aa7.42□□□□□ -1.22
PSPC1-205ENST00000497722 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.42□□□□□ -1.22
PSPC1-205ENST00000497722 NANOS1Q8WY41 292 aaKnown RBP7.42□□□□□ -1.22
PSPC1-205ENST00000497722 DHX9Q08211 1270 aaKnown RBP7.41□□□□□ -1.22
PSPC1-205ENST00000497722 NBPF20Q3BBV1 942 aa7.41□□□□□ -1.22
PSPC1-205ENST00000497722 TSEN34Q9BSV6 310 aaKnown RBP7.41□□□□□ -1.22
PSPC1-205ENST00000497722 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
PSPC1-205ENST00000497722 LILRA1O75019 489 aa7.4□□□□□ -1.22
PSPC1-205ENST00000497722 RNFT1Q5M7Z0 435 aa7.4□□□□□ -1.22
PSPC1-205ENST00000497722 KDF1Q8NAX2 398 aaPredicted RBP7.4□□□□□ -1.22
PSPC1-205ENST00000497722 TMPRSS4Q9NRS4 437 aa7.4□□□□□ -1.22
PSPC1-205ENST00000497722 ERVH48-1M5A8F1 160 aa7.39□□□□□ -1.23
PSPC1-205ENST00000497722 SPINT1O43278 529 aa7.39□□□□□ -1.23
PSPC1-205ENST00000497722 PTSQ03393 145 aa7.39□□□□□ -1.23
PSPC1-205ENST00000497722 DZIP3Q86Y13 1208 aaKnown RBP7.39□□□□□ -1.23
PSPC1-205ENST00000497722 WHAMMQ8TF30 809 aa7.39□□□□□ -1.23
PSPC1-205ENST00000497722 ADD1P35611 737 aaKnown RBP7.38□□□□□ -1.23
PSPC1-205ENST00000497722 SEPT12Q8IYM1 358 aa7.38□□□□□ -1.23
PSPC1-205ENST00000497722 ZNF784Q8NCA9 323 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms