RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 SEPT12Q8IYM1 358 aa22.21■■□□□ 1.15
COL1A2-212ENST00000497316 AXIN2Q9Y2T1 843 aa22.21■■□□□ 1.15
COL1A2-212ENST00000497316 KIF20BQ96Q89 1820 aa22.21■■□□□ 1.15
COL1A2-212ENST00000497316 LARP1Q6PKG0 1096 aaKnown RBP22.2■■□□□ 1.14
COL1A2-212ENST00000497316 CCDC125Q86Z20 511 aa22.2■■□□□ 1.14
COL1A2-212ENST00000497316 LTN1O94822 1766 aa22.2■■□□□ 1.14
COL1A2-212ENST00000497316 EP400Q96L91 3159 aa22.2■■□□□ 1.14
COL1A2-212ENST00000497316 CRB1P82279 1406 aa22.19■■□□□ 1.14
COL1A2-212ENST00000497316 KIF7Q2M1P5 1343 aa22.18■■□□□ 1.14
COL1A2-212ENST00000497316 FAM98CQ17RN3 349 aaKnown RBP22.18■■□□□ 1.14
COL1A2-212ENST00000497316 BARGINQ6ZT62 677 aa22.18■■□□□ 1.14
COL1A2-212ENST00000497316 GGNBP2Q9H3C7 697 aa22.18■■□□□ 1.14
COL1A2-212ENST00000497316 THRAP3Q9Y2W1 955 aaKnown RBP22.18■■□□□ 1.14
COL1A2-212ENST00000497316 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
COL1A2-212ENST00000497316 THSD7AQ9UPZ6 1657 aa22.17■■□□□ 1.14
COL1A2-212ENST00000497316 CGNL1Q0VF96 1302 aa22.17■■□□□ 1.14
COL1A2-212ENST00000497316 WDR17Q8IZU2 1322 aa22.17■■□□□ 1.14
COL1A2-212ENST00000497316 BRWD3Q6RI45 1802 aa22.17■■□□□ 1.14
COL1A2-212ENST00000497316 TCP11L2Q8N4U5 519 aa22.16■■□□□ 1.14
COL1A2-212ENST00000497316 PANK3Q9H999 370 aa22.16■■□□□ 1.14
COL1A2-212ENST00000497316 A0A0G2JS52 829 aa22.14■■□□□ 1.13
COL1A2-212ENST00000497316 MYT1Q01538 1121 aa22.14■■□□□ 1.13
COL1A2-212ENST00000497316 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.13
COL1A2-212ENST00000497316 TOM1L2Q6ZVM7 507 aa22.13■■□□□ 1.13
COL1A2-212ENST00000497316 IP6K1Q92551 441 aa22.13■■□□□ 1.13
COL1A2-212ENST00000497316 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
COL1A2-212ENST00000497316 ERBB3P21860 1342 aa22.12■■□□□ 1.13
COL1A2-212ENST00000497316 MAP3K19Q56UN5 1328 aa22.12■■□□□ 1.13
COL1A2-212ENST00000497316 KRT27Q7Z3Y8 459 aa22.12■■□□□ 1.13
COL1A2-212ENST00000497316 CARD10Q9BWT7 1032 aa22.11■■□□□ 1.13
COL1A2-212ENST00000497316 RTL1A6NKG5 1358 aa22.11■■□□□ 1.13
COL1A2-212ENST00000497316 CCDC7Q96M83 1385 aa22.11■■□□□ 1.13
COL1A2-212ENST00000497316 SF3B2Q13435 895 aaKnown RBP22.1■■□□□ 1.13
COL1A2-212ENST00000497316 KIF24Q5T7B8 1368 aa22.1■■□□□ 1.13
COL1A2-212ENST00000497316 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
COL1A2-212ENST00000497316 CSB-PGBD3P0DP91 1061 aa22.09■■□□□ 1.13
COL1A2-212ENST00000497316 NSD2O96028 1365 aa22.09■■□□□ 1.13
COL1A2-212ENST00000497316 FBLN1P23142 703 aa22.08■■□□□ 1.13
COL1A2-212ENST00000497316 AMPHP49418 695 aa22.08■■□□□ 1.13
COL1A2-212ENST00000497316 WASHC2AQ641Q2 1341 aa22.07■■□□□ 1.12
COL1A2-212ENST00000497316 PARP4Q9UKK3 1724 aaKnown RBP22.07■■□□□ 1.12
COL1A2-212ENST00000497316 HOXC9P31274 260 aa22.07■■□□□ 1.12
COL1A2-212ENST00000497316 ANKRD24Q8TF21 1146 aa22.07■■□□□ 1.12
COL1A2-212ENST00000497316 CDCA7Q9BWT1 371 aaPredicted RBP22.07■■□□□ 1.12
COL1A2-212ENST00000497316 RRS1Q15050 365 aaKnown RBP22.06■■□□□ 1.12
COL1A2-212ENST00000497316 KNSTRNQ9Y448 316 aa22.06■■□□□ 1.12
COL1A2-212ENST00000497316 FAM208AQ9UK61 1670 aaKnown RBP22.05■■□□□ 1.12
COL1A2-212ENST00000497316 WNK3Q9BYP7 1800 aa22.05■■□□□ 1.12
COL1A2-212ENST00000497316 DISP2A7MBM2 1401 aa22.03■■□□□ 1.12
COL1A2-212ENST00000497316 FLT4P35916 1363 aa22.02■■□□□ 1.12
COL1A2-212ENST00000497316 PER1O15534 1290 aaPredicted RBP22.02■■□□□ 1.12
COL1A2-212ENST00000497316 NLRP2Q9NX02 1062 aa22.02■■□□□ 1.12
COL1A2-212ENST00000497316 INSRP06213 1382 aa22.01■■□□□ 1.11
COL1A2-212ENST00000497316 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
COL1A2-212ENST00000497316 PEAK1Q9H792 1746 aa22■■□□□ 1.11
COL1A2-212ENST00000497316 AMER1Q5JTC6 1135 aaPredicted RBP22■■□□□ 1.11
COL1A2-212ENST00000497316 MAP2P11137 1827 aaKnown RBP22■■□□□ 1.11
COL1A2-212ENST00000497316 LRRC37A3O60309 1634 aa21.99■■□□□ 1.11
COL1A2-212ENST00000497316 DDB1Q16531 1140 aa21.99■■□□□ 1.11
COL1A2-212ENST00000497316 ZEB1P37275 1124 aaPredicted RBP21.98■■□□□ 1.11
COL1A2-212ENST00000497316 FAM196AQ6ZSG2 479 aa21.98■■□□□ 1.11
COL1A2-212ENST00000497316 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
COL1A2-212ENST00000497316 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
COL1A2-212ENST00000497316 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
COL1A2-212ENST00000497316 SMG6Q86US8 1419 aaKnown RBP21.97■■□□□ 1.11
COL1A2-212ENST00000497316 HSP90AB2PQ58FF8 381 aa21.97■■□□□ 1.11
COL1A2-212ENST00000497316 IL2RBP14784 551 aa21.96■■□□□ 1.11
COL1A2-212ENST00000497316 MORC1Q86VD1 984 aa21.96■■□□□ 1.11
COL1A2-212ENST00000497316 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
COL1A2-212ENST00000497316 EXOC5O00471 708 aa21.94■■□□□ 1.1
COL1A2-212ENST00000497316 BAG6P46379 1132 aa21.94■■□□□ 1.1
COL1A2-212ENST00000497316 FAM182BQ5T319 152 aa21.94■■□□□ 1.1
COL1A2-212ENST00000497316 SRCAPQ6ZRS2 3230 aa21.93■■□□□ 1.1
COL1A2-212ENST00000497316 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
COL1A2-212ENST00000497316 DEFB132Q7Z7B7 95 aa21.93■■□□□ 1.1
COL1A2-212ENST00000497316 OVOS2A0A0G2JMS6 1433 aa21.92■■□□□ 1.1
COL1A2-212ENST00000497316 TNS2Q63HR2 1409 aa21.92■■□□□ 1.1
COL1A2-212ENST00000497316 PPM1GO15355 546 aaPredicted RBP21.92■■□□□ 1.1
COL1A2-212ENST00000497316 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
COL1A2-212ENST00000497316 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
COL1A2-212ENST00000497316 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
COL1A2-212ENST00000497316 RGPD1P0DJD0 1748 aa21.92■■□□□ 1.1
COL1A2-212ENST00000497316 BCL9O00512 1426 aa21.91■■□□□ 1.1
COL1A2-212ENST00000497316 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
COL1A2-212ENST00000497316 NCAPD2Q15021 1401 aa21.88■■□□□ 1.09
COL1A2-212ENST00000497316 TNS1Q9HBL0 1735 aaKnown RBP21.86■■□□□ 1.09
COL1A2-212ENST00000497316 TRIM37O94972 964 aa21.85■■□□□ 1.09
COL1A2-212ENST00000497316 CC2D1BQ5T0F9 858 aaKnown RBP21.85■■□□□ 1.09
COL1A2-212ENST00000497316 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
COL1A2-212ENST00000497316 MEGF6O75095 1541 aa21.84■■□□□ 1.09
COL1A2-212ENST00000497316 EIF4A2Q14240 407 aaKnown RBP21.83■■□□□ 1.09
COL1A2-212ENST00000497316 USHBP1Q8N6Y0 703 aa21.83■■□□□ 1.09
COL1A2-212ENST00000497316 RAPGEF4Q8WZA2 1011 aa21.83■■□□□ 1.09
COL1A2-212ENST00000497316 EYA1Q99502 592 aa21.83■■□□□ 1.09
COL1A2-212ENST00000497316 TATP17735 454 aaPredicted RBP21.81■■□□□ 1.08
COL1A2-212ENST00000497316 ZCRB1Q8TBF4 217 aaKnown RBP21.81■■□□□ 1.08
COL1A2-212ENST00000497316 EN1Q05925 392 aaPredicted RBP21.8■■□□□ 1.08
COL1A2-212ENST00000497316 PLEKHG2Q9H7P9 1386 aa21.79■■□□□ 1.08
COL1A2-212ENST00000497316 MTHFSP49914 203 aa21.79■■□□□ 1.08
COL1A2-212ENST00000497316 BCL11BQ9C0K0 894 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms