RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
ITGB5-210ENST00000496703 KIF20BQ96Q89 1820 aa22.57■■□□□ 1.2
ITGB5-210ENST00000496703 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
ITGB5-210ENST00000496703 USP35Q9P2H5 1018 aa22.56■■□□□ 1.2
ITGB5-210ENST00000496703 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
ITGB5-210ENST00000496703 A0A0G2JS52 829 aa22.54■■□□□ 1.2
ITGB5-210ENST00000496703 MYT1Q01538 1121 aa22.54■■□□□ 1.2
ITGB5-210ENST00000496703 KRT27Q7Z3Y8 459 aa22.54■■□□□ 1.2
ITGB5-210ENST00000496703 CARD14Q9BXL6 1004 aa22.52■■□□□ 1.2
ITGB5-210ENST00000496703 ABCC6O95255 1503 aa22.51■■□□□ 1.19
ITGB5-210ENST00000496703 CRB1P82279 1406 aa22.5■■□□□ 1.19
ITGB5-210ENST00000496703 FYB1O15117 783 aa22.5■■□□□ 1.19
ITGB5-210ENST00000496703 FBLN1P23142 703 aa22.5■■□□□ 1.19
ITGB5-210ENST00000496703 FAM182BQ5T319 152 aa22.5■■□□□ 1.19
ITGB5-210ENST00000496703 BARGINQ6ZT62 677 aa22.5■■□□□ 1.19
ITGB5-210ENST00000496703 TCP11L2Q8N4U5 519 aa22.5■■□□□ 1.19
ITGB5-210ENST00000496703 PARP4Q9UKK3 1724 aaKnown RBP22.5■■□□□ 1.19
ITGB5-210ENST00000496703 C11orf95C9JLR9 678 aaPredicted RBP22.49■■□□□ 1.19
ITGB5-210ENST00000496703 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
ITGB5-210ENST00000496703 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
ITGB5-210ENST00000496703 POLR3GLQ9BT43 218 aa22.47■■□□□ 1.19
ITGB5-210ENST00000496703 NSD3Q9BZ95 1437 aa22.47■■□□□ 1.19
ITGB5-210ENST00000496703 TOM1L2Q6ZVM7 507 aa22.46■■□□□ 1.19
ITGB5-210ENST00000496703 COG3Q96JB2 828 aa22.46■■□□□ 1.19
ITGB5-210ENST00000496703 RGPD2P0DJD1 1756 aa22.45■■□□□ 1.19
ITGB5-210ENST00000496703 LRRC37A3O60309 1634 aa22.45■■□□□ 1.18
ITGB5-210ENST00000496703 THRAP3Q9Y2W1 955 aaKnown RBP22.44■■□□□ 1.18
ITGB5-210ENST00000496703 BLMP54132 1417 aaPredicted RBP22.42■■□□□ 1.18
ITGB5-210ENST00000496703 MAP3K19Q56UN5 1328 aa22.42■■□□□ 1.18
ITGB5-210ENST00000496703 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
ITGB5-210ENST00000496703 ERBB3P21860 1342 aa22.41■■□□□ 1.18
ITGB5-210ENST00000496703 PEAK1Q9H792 1746 aa22.41■■□□□ 1.18
ITGB5-210ENST00000496703 TNS1Q9HBL0 1735 aaKnown RBP22.41■■□□□ 1.18
ITGB5-210ENST00000496703 CSB-PGBD3P0DP91 1061 aa22.41■■□□□ 1.18
ITGB5-210ENST00000496703 RGPD1P0DJD0 1748 aa22.4■■□□□ 1.18
ITGB5-210ENST00000496703 CCDC125Q86Z20 511 aa22.4■■□□□ 1.18
ITGB5-210ENST00000496703 CARD10Q9BWT7 1032 aa22.4■■□□□ 1.18
ITGB5-210ENST00000496703 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
ITGB5-210ENST00000496703 SBF2Q86WG5 1849 aa22.39■■□□□ 1.17
ITGB5-210ENST00000496703 RRS1Q15050 365 aaKnown RBP22.39■■□□□ 1.17
ITGB5-210ENST00000496703 IP6K1Q92551 441 aa22.39■■□□□ 1.17
ITGB5-210ENST00000496703 DISP2A7MBM2 1401 aa22.39■■□□□ 1.17
ITGB5-210ENST00000496703 DEFB132Q7Z7B7 95 aa22.38■■□□□ 1.17
ITGB5-210ENST00000496703 ANKRD24Q8TF21 1146 aa22.38■■□□□ 1.17
ITGB5-210ENST00000496703 FAM208AQ9UK61 1670 aaKnown RBP22.37■■□□□ 1.17
ITGB5-210ENST00000496703 HOXC9P31274 260 aa22.36■■□□□ 1.17
ITGB5-210ENST00000496703 PANK3Q9H999 370 aa22.36■■□□□ 1.17
ITGB5-210ENST00000496703 KAT6BQ8WYB5 2073 aa22.35■■□□□ 1.17
ITGB5-210ENST00000496703 KIF7Q2M1P5 1343 aa22.35■■□□□ 1.17
ITGB5-210ENST00000496703 PDE3BQ13370 1112 aa22.35■■□□□ 1.17
ITGB5-210ENST00000496703 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
ITGB5-210ENST00000496703 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
ITGB5-210ENST00000496703 CCDC7Q96M83 1385 aa22.34■■□□□ 1.17
ITGB5-210ENST00000496703 AMPHP49418 695 aa22.33■■□□□ 1.17
ITGB5-210ENST00000496703 FAM196AQ6ZSG2 479 aa22.33■■□□□ 1.17
ITGB5-210ENST00000496703 SRCAPQ6ZRS2 3230 aa22.33■■□□□ 1.16
ITGB5-210ENST00000496703 CGNL1Q0VF96 1302 aa22.32■■□□□ 1.16
ITGB5-210ENST00000496703 DDB1Q16531 1140 aa22.32■■□□□ 1.16
ITGB5-210ENST00000496703 RTL1A6NKG5 1358 aa22.31■■□□□ 1.16
ITGB5-210ENST00000496703 TRIM37O94972 964 aa22.31■■□□□ 1.16
ITGB5-210ENST00000496703 CDCA7Q9BWT1 371 aaPredicted RBP22.3■■□□□ 1.16
ITGB5-210ENST00000496703 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
ITGB5-210ENST00000496703 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
ITGB5-210ENST00000496703 EMILIN1Q9Y6C2 1016 aa22.29■■□□□ 1.16
ITGB5-210ENST00000496703 HSP90AB2PQ58FF8 381 aa22.28■■□□□ 1.16
ITGB5-210ENST00000496703 SHANK3Q9BYB0 1731 aa22.26■■□□□ 1.15
ITGB5-210ENST00000496703 OVOS2A0A0G2JMS6 1433 aa22.26■■□□□ 1.15
ITGB5-210ENST00000496703 TNS2Q63HR2 1409 aa22.26■■□□□ 1.15
ITGB5-210ENST00000496703 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
ITGB5-210ENST00000496703 FLT4P35916 1363 aa22.25■■□□□ 1.15
ITGB5-210ENST00000496703 IL2RBP14784 551 aa22.25■■□□□ 1.15
ITGB5-210ENST00000496703 INSRP06213 1382 aa22.25■■□□□ 1.15
ITGB5-210ENST00000496703 EXOC5O00471 708 aa22.24■■□□□ 1.15
ITGB5-210ENST00000496703 BAG6P46379 1132 aa22.24■■□□□ 1.15
ITGB5-210ENST00000496703 NBPF6Q5VWK0 638 aa22.24■■□□□ 1.15
ITGB5-210ENST00000496703 NBPF4Q96M43 638 aa22.24■■□□□ 1.15
ITGB5-210ENST00000496703 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
ITGB5-210ENST00000496703 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
ITGB5-210ENST00000496703 PTF1AQ7RTS3 328 aa22.23■■□□□ 1.15
ITGB5-210ENST00000496703 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
ITGB5-210ENST00000496703 USHBP1Q8N6Y0 703 aa22.22■■□□□ 1.15
ITGB5-210ENST00000496703 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
ITGB5-210ENST00000496703 MEGF6O75095 1541 aa22.21■■□□□ 1.15
ITGB5-210ENST00000496703 RREB1Q92766 1687 aa22.21■■□□□ 1.15
ITGB5-210ENST00000496703 BCL9O00512 1426 aa22.21■■□□□ 1.15
ITGB5-210ENST00000496703 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
ITGB5-210ENST00000496703 EZH2Q15910 746 aaKnown RBP22.2■■□□□ 1.14
ITGB5-210ENST00000496703 CAMKK2Q96RR4 588 aa22.2■■□□□ 1.14
ITGB5-210ENST00000496703 APBA3O96018 575 aa22.19■■□□□ 1.14
ITGB5-210ENST00000496703 AMER1Q5JTC6 1135 aaPredicted RBP22.19■■□□□ 1.14
ITGB5-210ENST00000496703 NSD2O96028 1365 aa22.19■■□□□ 1.14
ITGB5-210ENST00000496703 NUP188Q5SRE5 1749 aa22.18■■□□□ 1.14
ITGB5-210ENST00000496703 SMG6Q86US8 1419 aaKnown RBP22.18■■□□□ 1.14
ITGB5-210ENST00000496703 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
ITGB5-210ENST00000496703 KNSTRNQ9Y448 316 aa22.18■■□□□ 1.14
ITGB5-210ENST00000496703 NHSQ6T4R5 1651 aa22.17■■□□□ 1.14
ITGB5-210ENST00000496703 RGPD3A6NKT7 1758 aaPredicted RBP22.15■■□□□ 1.14
ITGB5-210ENST00000496703 RGPD4Q7Z3J3 1758 aa22.15■■□□□ 1.14
ITGB5-210ENST00000496703 BTAF1O14981 1849 aa22.14■■□□□ 1.13
ITGB5-210ENST00000496703 NCAPD2Q15021 1401 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms