RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 CEP112Q8N8E3 955 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 ZHX1Q9UKY1 873 aaPredicted RBP6.07□□□□□ -1.44
NF1-216ENST00000495910 LUC7L2Q9Y383 392 aaKnown RBP6.07□□□□□ -1.44
NF1-216ENST00000495910 GOLIM4O00461 696 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 ZSCAN12O43309 604 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 SPECC1Q5M775 1068 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 CHMP2AO43633 222 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 ZNF853P0CG23 659 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 LARP1Q6PKG0 1096 aaKnown RBP6.06□□□□□ -1.44
NF1-216ENST00000495910 SAMD1Q6SPF0 538 aaPredicted RBP6.06□□□□□ -1.44
NF1-216ENST00000495910 PPP1R14CQ8TAE6 165 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 TRIM35Q9UPQ4 493 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 A0A1B0GUA9 196 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 SLU7O95391 586 aaKnown RBP6.06□□□□□ -1.44
NF1-216ENST00000495910 STK38Q15208 465 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 TTC31Q49AM3 519 aaPredicted RBP6.06□□□□□ -1.44
NF1-216ENST00000495910 DDX12PQ92771 950 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 SSX2IPQ9Y2D8 614 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 KIF4AO95239 1232 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 LMAN1P49257 510 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 DNAJC21Q5F1R6 531 aaKnown RBP6.06□□□□□ -1.44
NF1-216ENST00000495910 PABPN1Q86U42 306 aaKnown RBP eCLIP6.06□□□□□ -1.44
NF1-216ENST00000495910 ZC4H2Q9NQZ6 224 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 MRVI1Q9Y6F6 885 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 CCDC178Q5BJE1 867 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 GBP6Q6ZN66 633 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 PDCP20941 246 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 SART3Q15020 963 aaKnown RBP6.06□□□□□ -1.44
NF1-216ENST00000495910 SPA17Q15506 151 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 CFAP58Q5T655 872 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 CEP135Q66GS9 1140 aa6.06□□□□□ -1.44
NF1-216ENST00000495910 NAA15Q9BXJ9 866 aaKnown RBP6.06□□□□□ -1.44
NF1-216ENST00000495910 PDE1CQ14123 709 aaPredicted RBP6.05□□□□□ -1.44
NF1-216ENST00000495910 TSPYL2Q9H2G4 693 aaPredicted RBP6.05□□□□□ -1.44
NF1-216ENST00000495910 SMTNL1A8MU46 457 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 MGEA5O60502 916 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 MAP7D1Q3KQU3 841 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 TNMDQ9H2S6 317 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 MAP3K9P80192 1104 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 CCDC110Q8TBZ0 833 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 BAZ1AQ9NRL2 1556 aaPredicted RBP6.05□□□□□ -1.44
NF1-216ENST00000495910 ERC2O15083 957 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 NAA25Q14CX7 972 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 CEP57Q86XR8 500 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 PRPF31Q8WWY3 499 aaKnown RBP6.05□□□□□ -1.44
NF1-216ENST00000495910 HYPKQ9NX55 129 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 PHLDB1Q86UU1 1377 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 PSMC4P43686 418 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 CCDC83Q8IWF9 413 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 PRPF40AO75400 957 aaKnown RBP6.05□□□□□ -1.44
NF1-216ENST00000495910 PAFAH1B1P43034 410 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 IKQ13123 557 aaPredicted RBP6.05□□□□□ -1.44
NF1-216ENST00000495910 PRR16Q569H4 304 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 ATP2C2O75185 946 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 PPFIA2O75334 1257 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 PTPN14Q15678 1187 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 CCDC27Q2M243 656 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 STIM2Q9P246 746 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 IKBKGQ9Y6K9 419 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 USH1CQ9Y6N9 552 aa6.05□□□□□ -1.44
NF1-216ENST00000495910 RSF1Q96T23 1441 aaPredicted RBP6.04□□□□□ -1.44
NF1-216ENST00000495910 EIF5P55010 431 aaKnown RBP6.04□□□□□ -1.44
NF1-216ENST00000495910 ZMYND15Q9H091 742 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 PAK3O75914 559 aaPredicted RBP6.04□□□□□ -1.44
NF1-216ENST00000495910 ZKSCAN2Q63HK3 967 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 IL27Q8NEV9 243 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 KIF18AQ8NI77 898 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 MAATS1Q7Z4T9 603 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 LMNTD2Q8IXW0 634 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 MICALL1Q8N3F8 863 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 C22orf23Q9BZE7 217 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 ANKS4BQ8N8V4 417 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 GRPEL1Q9HAV7 217 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 DIAPH1O60610 1272 aaKnown RBP6.04□□□□□ -1.44
NF1-216ENST00000495910 CTNNBL1Q8WYA6 563 aaPredicted RBP6.04□□□□□ -1.44
NF1-216ENST00000495910 ESPNB1AK53 854 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 ZHX3Q9H4I2 956 aa6.04□□□□□ -1.44
NF1-216ENST00000495910 MCM2P49736 904 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 SATB1Q01826 763 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 KIF5AQ12840 1032 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 G3BP1Q13283 466 aaKnown RBP eCLIP6.03□□□□□ -1.44
NF1-216ENST00000495910 NAA16Q6N069 864 aaPredicted RBP6.03□□□□□ -1.44
NF1-216ENST00000495910 CCDC121Q6ZUS5 278 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 WDR63Q8IWG1 891 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 NINLQ9Y2I6 1382 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 HSF2BPO75031 334 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 MAP7Q14244 749 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 PAXIP1Q6ZW49 1069 aaPredicted RBP6.03□□□□□ -1.44
NF1-216ENST00000495910 CEP57L1Q8IYX8 460 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 DDX27Q96GQ7 796 aaKnown RBP6.03□□□□□ -1.44
NF1-216ENST00000495910 VCX3BQ9H321 246 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 BMP2KQ9NSY1 1161 aaPredicted RBP6.03□□□□□ -1.44
NF1-216ENST00000495910 ROCK1Q13464 1354 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 KIF4BQ2VIQ3 1234 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 NBPF1Q3BBV0 1214 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 CCDC155Q8N6L0 562 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 VPS36Q86VN1 386 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 SH2D4BQ5SQS7 431 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 CTAGE6Q86UF2 777 aa6.03□□□□□ -1.44
NF1-216ENST00000495910 A0A1W2PRG0 241 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms