RNA–Protein interactions for RNA: ENST00000495727.2

RC3H2-209, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-209ENST00000495727 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
RC3H2-209ENST00000495727 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
RC3H2-209ENST00000495727 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
RC3H2-209ENST00000495727 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
RC3H2-209ENST00000495727 BLOC1S3Q6QNY0 202 aa8.51□□□□□ -1.05
RC3H2-209ENST00000495727 MTRQ99707 1265 aa8.51□□□□□ -1.05
RC3H2-209ENST00000495727 CNTLNQ9NXG0 1405 aa8.51□□□□□ -1.05
RC3H2-209ENST00000495727 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
RC3H2-209ENST00000495727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.5□□□□□ -1.05
RC3H2-209ENST00000495727 SPTLC1O15269 473 aa8.5□□□□□ -1.05
RC3H2-209ENST00000495727 CLK2P49760 499 aaKnown RBP8.5□□□□□ -1.05
RC3H2-209ENST00000495727 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
RC3H2-209ENST00000495727 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
RC3H2-209ENST00000495727 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
RC3H2-209ENST00000495727 LRP6O75581 1613 aa8.5□□□□□ -1.05
RC3H2-209ENST00000495727 NHSL1Q5SYE7 1610 aa8.5□□□□□ -1.05
RC3H2-209ENST00000495727 IQGAP1P46940 1657 aa8.49□□□□□ -1.05
RC3H2-209ENST00000495727 MOXD2PA6NHM9 499 aa8.49□□□□□ -1.05
RC3H2-209ENST00000495727 FDX1P10109 184 aa8.49□□□□□ -1.05
RC3H2-209ENST00000495727 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
RC3H2-209ENST00000495727 CLTCQ00610 1675 aaKnown RBP8.49□□□□□ -1.05
RC3H2-209ENST00000495727 RGS12O14924 1447 aa8.48□□□□□ -1.05
RC3H2-209ENST00000495727 ZPR1O75312 459 aa8.48□□□□□ -1.05
RC3H2-209ENST00000495727 COPS2P61201 443 aa8.48□□□□□ -1.05
RC3H2-209ENST00000495727 KCNC4Q03721 635 aa8.48□□□□□ -1.05
RC3H2-209ENST00000495727 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
RC3H2-209ENST00000495727 PUS10Q3MIT2 529 aaKnown RBP8.48□□□□□ -1.05
RC3H2-209ENST00000495727 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
RC3H2-209ENST00000495727 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
RC3H2-209ENST00000495727 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
RC3H2-209ENST00000495727 YY1P25490 414 aa8.47□□□□□ -1.05
RC3H2-209ENST00000495727 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
RC3H2-209ENST00000495727 DEPDC5O75140 1603 aa8.47□□□□□ -1.05
RC3H2-209ENST00000495727 CARMIL1Q5VZK9 1371 aa8.47□□□□□ -1.05
RC3H2-209ENST00000495727 SENP3-EIF4A1A0A087X0R7 540 aa8.46□□□□□ -1.06
RC3H2-209ENST00000495727 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
RC3H2-209ENST00000495727 FMNL1O95466 1100 aaPredicted RBP8.46□□□□□ -1.06
RC3H2-209ENST00000495727 PCMTD1Q96MG8 357 aaPredicted RBP8.46□□□□□ -1.06
RC3H2-209ENST00000495727 ITSN2Q9NZM3 1697 aa8.46□□□□□ -1.06
RC3H2-209ENST00000495727 FAM135BQ49AJ0 1406 aa8.46□□□□□ -1.06
RC3H2-209ENST00000495727 ARID3CA6NKF2 412 aa8.45□□□□□ -1.06
RC3H2-209ENST00000495727 ADH1BP00325 375 aa8.45□□□□□ -1.06
RC3H2-209ENST00000495727 NDUFV2P19404 249 aa8.45□□□□□ -1.06
RC3H2-209ENST00000495727 ZNF772Q68DY9 489 aaPredicted RBP8.45□□□□□ -1.06
RC3H2-209ENST00000495727 KIF27Q86VH2 1401 aa8.45□□□□□ -1.06
RC3H2-209ENST00000495727 SCAPERQ9BY12 1400 aa8.45□□□□□ -1.06
RC3H2-209ENST00000495727 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
RC3H2-209ENST00000495727 GOLGA3Q08378 1498 aa8.45□□□□□ -1.06
RC3H2-209ENST00000495727 COL16A1Q07092 1604 aaPredicted RBP8.44□□□□□ -1.06
RC3H2-209ENST00000495727 SHPRHQ149N8 1683 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 MTMR2Q13614 643 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 BRICD5Q6PL45 260 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 HLA-CQ95604 372 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
RC3H2-209ENST00000495727 ZBTB3Q9H5J0 574 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 LIMD1Q9UGP4 676 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
RC3H2-209ENST00000495727 ZC3H13Q5T200 1668 aaKnown RBP8.43□□□□□ -1.06
RC3H2-209ENST00000495727 RXRBP28702 533 aa8.43□□□□□ -1.06
RC3H2-209ENST00000495727 GUCA2AQ02747 115 aa8.43□□□□□ -1.06
RC3H2-209ENST00000495727 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
RC3H2-209ENST00000495727 ESF1Q9H501 851 aaKnown RBP8.43□□□□□ -1.06
RC3H2-209ENST00000495727 MSS51Q4VC12 460 aa8.42□□□□□ -1.06
RC3H2-209ENST00000495727 SPSB2Q99619 263 aa8.42□□□□□ -1.06
RC3H2-209ENST00000495727 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
RC3H2-209ENST00000495727 POLR3EQ9NVU0 708 aa8.42□□□□□ -1.06
RC3H2-209ENST00000495727 MYO5CQ9NQX4 1742 aa8.42□□□□□ -1.06
RC3H2-209ENST00000495727 MED14O60244 1454 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 JCADQ9P266 1359 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 C6orf229H3BNL8 230 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 LILRB3O75022 631 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 RNF19BQ6ZMZ0 732 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 ZNF516Q92618 1163 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 PLA2G2EQ9NZK7 142 aa8.41□□□□□ -1.06
RC3H2-209ENST00000495727 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
RC3H2-209ENST00000495727 TLL1O43897 1013 aa8.4□□□□□ -1.06
RC3H2-209ENST00000495727 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
RC3H2-209ENST00000495727 HRCP23327 699 aa8.39□□□□□ -1.07
RC3H2-209ENST00000495727 GGCXP38435 758 aa8.39□□□□□ -1.07
RC3H2-209ENST00000495727 DESI1Q6ICB0 168 aa8.39□□□□□ -1.07
RC3H2-209ENST00000495727 PCDHB15Q9Y5E8 787 aa8.39□□□□□ -1.07
RC3H2-209ENST00000495727 NPHP4O75161 1426 aaPredicted RBP8.38□□□□□ -1.07
RC3H2-209ENST00000495727 ZMYM3Q14202 1370 aa8.38□□□□□ -1.07
RC3H2-209ENST00000495727 KIF14Q15058 1648 aa8.38□□□□□ -1.07
RC3H2-209ENST00000495727 NWD1Q149M9 1564 aa8.38□□□□□ -1.07
RC3H2-209ENST00000495727 ADGBQ8N7X0 1667 aa8.37□□□□□ -1.07
RC3H2-209ENST00000495727 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
RC3H2-209ENST00000495727 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
RC3H2-209ENST00000495727 QPCTQ16769 361 aa8.37□□□□□ -1.07
RC3H2-209ENST00000495727 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
RC3H2-209ENST00000495727 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
RC3H2-209ENST00000495727 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
RC3H2-209ENST00000495727 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
RC3H2-209ENST00000495727 SLC6A16Q9GZN6 736 aa8.37□□□□□ -1.07
RC3H2-209ENST00000495727 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
RC3H2-209ENST00000495727 ABCC1P33527 1531 aa8.37□□□□□ -1.07
RC3H2-209ENST00000495727 KIDINS220Q9ULH0 1771 aa8.37□□□□□ -1.07
RC3H2-209ENST00000495727 LRRC9Q6ZRR7 1453 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms