RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 EMILIN1Q9Y6C2 1016 aa10.75□□□□□ -0.69
SRRM1-219ENST00000495561 NR6A1Q15406 480 aa10.74□□□□□ -0.69
SRRM1-219ENST00000495561 PPP2R2DQ66LE6 453 aa10.74□□□□□ -0.69
SRRM1-219ENST00000495561 ARHGAP9Q9BRR9 750 aa10.74□□□□□ -0.69
SRRM1-219ENST00000495561 SOS2Q07890 1332 aaPredicted RBP10.73□□□□□ -0.69
SRRM1-219ENST00000495561 ZSCAN1Q8NBB4 408 aa10.72□□□□□ -0.69
SRRM1-219ENST00000495561 VSIG8P0DPA2 414 aa10.71□□□□□ -0.69
SRRM1-219ENST00000495561 TSEN34Q9BSV6 310 aaKnown RBP10.71□□□□□ -0.69
SRRM1-219ENST00000495561 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
SRRM1-219ENST00000495561 ZC3H4Q9UPT8 1303 aaKnown RBP10.71□□□□□ -0.69
SRRM1-219ENST00000495561 AP1G2O75843 785 aa10.7□□□□□ -0.7
SRRM1-219ENST00000495561 PPP1R26Q5T8A7 1209 aaPredicted RBP10.7□□□□□ -0.7
SRRM1-219ENST00000495561 SLC10A4Q96EP9 437 aa10.7□□□□□ -0.7
SRRM1-219ENST00000495561 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
SRRM1-219ENST00000495561 DNMT3LQ9UJW3 386 aa10.7□□□□□ -0.7
SRRM1-219ENST00000495561 KCTD15Q96SI1 283 aaPredicted RBP10.69□□□□□ -0.7
SRRM1-219ENST00000495561 FAM181BA6NEQ2 426 aa10.68□□□□□ -0.7
SRRM1-219ENST00000495561 PPFIA3O75145 1194 aa10.68□□□□□ -0.7
SRRM1-219ENST00000495561 ZBTB33Q86T24 672 aa10.68□□□□□ -0.7
SRRM1-219ENST00000495561 BCANQ96GW7 911 aa10.68□□□□□ -0.7
SRRM1-219ENST00000495561 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
SRRM1-219ENST00000495561 CDV3Q9UKY7 258 aaKnown RBP10.68□□□□□ -0.7
SRRM1-219ENST00000495561 CBLBQ13191 982 aa10.67□□□□□ -0.7
SRRM1-219ENST00000495561 Q6ZVU0 165 aa10.67□□□□□ -0.7
SRRM1-219ENST00000495561 EPS8L1Q8TE68 723 aa10.67□□□□□ -0.7
SRRM1-219ENST00000495561 PTK2Q05397 1052 aa10.66□□□□□ -0.7
SRRM1-219ENST00000495561 TTLL8A6PVC2 850 aa10.65□□□□□ -0.7
SRRM1-219ENST00000495561 HMX1Q9NP08 348 aaPredicted RBP10.65□□□□□ -0.7
SRRM1-219ENST00000495561 GPSM3Q9Y4H4 160 aa10.65□□□□□ -0.7
SRRM1-219ENST00000495561 USP17L8P0C7I0 530 aa10.64□□□□□ -0.71
SRRM1-219ENST00000495561 INTS6LQ5JSJ4 861 aaKnown RBP10.64□□□□□ -0.71
SRRM1-219ENST00000495561 ADAM32Q8TC27 787 aa10.64□□□□□ -0.71
SRRM1-219ENST00000495561 DHX9Q08211 1270 aaKnown RBP10.63□□□□□ -0.71
SRRM1-219ENST00000495561 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.63□□□□□ -0.711e-6■■■■□ 22.9
SRRM1-219ENST00000495561 SPINT1O43278 529 aa10.62□□□□□ -0.71
SRRM1-219ENST00000495561 FIGNL2A6NMB9 653 aa10.61□□□□□ -0.71
SRRM1-219ENST00000495561 RFC5P40937 340 aa10.61□□□□□ -0.71
SRRM1-219ENST00000495561 PTSQ03393 145 aa10.6□□□□□ -0.71
SRRM1-219ENST00000495561 PNMA1Q8ND90 353 aa10.6□□□□□ -0.71
SRRM1-219ENST00000495561 AGBL1Q96MI9 1066 aa10.6□□□□□ -0.71
SRRM1-219ENST00000495561 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
SRRM1-219ENST00000495561 RELBQ01201 579 aa10.57□□□□□ -0.72
SRRM1-219ENST00000495561 TMPRSS4Q9NRS4 437 aa10.57□□□□□ -0.72
SRRM1-219ENST00000495561 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
SRRM1-219ENST00000495561 RAB15P59190 212 aa10.56□□□□□ -0.72
SRRM1-219ENST00000495561 GPR161Q8N6U8 529 aaKnown RBP10.56□□□□□ -0.72
SRRM1-219ENST00000495561 DZIP3Q86Y13 1208 aaKnown RBP10.55□□□□□ -0.72
SRRM1-219ENST00000495561 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
SRRM1-219ENST00000495561 INSM2Q96T92 566 aaPredicted RBP10.55□□□□□ -0.72
SRRM1-219ENST00000495561 TRIM34Q9BYJ4 488 aa10.55□□□□□ -0.72
SRRM1-219ENST00000495561 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
SRRM1-219ENST00000495561 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
SRRM1-219ENST00000495561 ESPNB1AK53 854 aa10.53□□□□□ -0.72
SRRM1-219ENST00000495561 ERVH48-1M5A8F1 160 aa10.53□□□□□ -0.72
SRRM1-219ENST00000495561 KRT76Q01546 638 aa10.53□□□□□ -0.72
SRRM1-219ENST00000495561 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
SRRM1-219ENST00000495561 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
SRRM1-219ENST00000495561 SLC35F4A4IF30 521 aa10.52□□□□□ -0.73
SRRM1-219ENST00000495561 LILRA1O75019 489 aa10.52□□□□□ -0.73
SRRM1-219ENST00000495561 POLMQ9NP87 494 aaPredicted RBP10.52□□□□□ -0.73
SRRM1-219ENST00000495561 ADH1AP07327 375 aa10.51□□□□□ -0.73
SRRM1-219ENST00000495561 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
SRRM1-219ENST00000495561 TMEM259Q4ZIN3 620 aa10.51□□□□□ -0.73
SRRM1-219ENST00000495561 RNF217Q8TC41 542 aa10.51□□□□□ -0.73
SRRM1-219ENST00000495561 NANOS1Q8WY41 292 aaKnown RBP10.51□□□□□ -0.73
SRRM1-219ENST00000495561 KDF1Q8NAX2 398 aaPredicted RBP10.5□□□□□ -0.73
SRRM1-219ENST00000495561 CNTNAP3BQ96NU0 1288 aa10.5□□□□□ -0.73
SRRM1-219ENST00000495561 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
SRRM1-219ENST00000495561 ITGA6P23229 1130 aa10.48□□□□□ -0.73
SRRM1-219ENST00000495561 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
SRRM1-219ENST00000495561 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
SRRM1-219ENST00000495561 IL27Q8NEV9 243 aa10.48□□□□□ -0.73
SRRM1-219ENST00000495561 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
SRRM1-219ENST00000495561 COL25A1Q9BXS0 654 aaPredicted RBP10.48□□□□□ -0.73
SRRM1-219ENST00000495561 PTGIRP43119 386 aa10.47□□□□□ -0.73
SRRM1-219ENST00000495561 SENP3-EIF4A1A0A087X0R7 540 aa10.46□□□□□ -0.73
SRRM1-219ENST00000495561 ZBBXA8MT70 800 aa10.46□□□□□ -0.73
SRRM1-219ENST00000495561 RNFT1Q5M7Z0 435 aa10.46□□□□□ -0.73
SRRM1-219ENST00000495561 SEPT12Q8IYM1 358 aa10.46□□□□□ -0.73
SRRM1-219ENST00000495561 CYLDQ9NQC7 956 aa10.46□□□□□ -0.73
SRRM1-219ENST00000495561 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
SRRM1-219ENST00000495561 FBXO45P0C2W1 286 aa10.45□□□□□ -0.74
SRRM1-219ENST00000495561 VWA5B2Q8N398 1253 aa10.45□□□□□ -0.74
SRRM1-219ENST00000495561 PCDHB9Q9Y5E1 797 aa10.45□□□□□ -0.74
SRRM1-219ENST00000495561 CDC14CA4D256 554 aa10.43□□□□□ -0.74
SRRM1-219ENST00000495561 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
SRRM1-219ENST00000495561 SV2AQ7L0J3 742 aa10.42□□□□□ -0.74
SRRM1-219ENST00000495561 LYSMD3Q7Z3D4 306 aa10.4□□□□□ -0.74
SRRM1-219ENST00000495561 RNF144AP50876 292 aaPredicted RBP10.39□□□□□ -0.75
SRRM1-219ENST00000495561 BRPF1P55201 1214 aaPredicted RBP10.39□□□□□ -0.75
SRRM1-219ENST00000495561 KCNMA1Q12791 1236 aa10.39□□□□□ -0.75
SRRM1-219ENST00000495561 ZNF385CQ66K41 422 aaPredicted RBP10.39□□□□□ -0.75
SRRM1-219ENST00000495561 TRIM52Q96A61 297 aa10.39□□□□□ -0.75
SRRM1-219ENST00000495561 ATP5J2-PTCD1G3V325 749 aa10.38□□□□□ -0.75
SRRM1-219ENST00000495561 GSK3AP49840 483 aa10.38□□□□□ -0.75
SRRM1-219ENST00000495561 CUEDC1Q9NWM3 386 aaPredicted RBP10.38□□□□□ -0.75
SRRM1-219ENST00000495561 SLURP2P0DP57 97 aa10.37□□□□□ -0.75
SRRM1-219ENST00000495561 PRICKLE2Q7Z3G6 844 aa10.37□□□□□ -0.75
SRRM1-219ENST00000495561 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
SRRM1-219ENST00000495561 GPR37L1O60883 481 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms