RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CSB-PGBD3P0DP91 1061 aa16.49■□□□□ 0.23
CSNK1E-213ENST00000495232 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
CSNK1E-213ENST00000495232 ANKRD26Q9UPS8 1709 aa16.49■□□□□ 0.23
CSNK1E-213ENST00000495232 AXIN2Q9Y2T1 843 aa16.49■□□□□ 0.23
CSNK1E-213ENST00000495232 ABCC6O95255 1503 aa16.49■□□□□ 0.23
CSNK1E-213ENST00000495232 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-213ENST00000495232 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-213ENST00000495232 FBLN1P23142 703 aa16.48■□□□□ 0.23
CSNK1E-213ENST00000495232 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-213ENST00000495232 RRS1Q15050 365 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-213ENST00000495232 COL18A1P39060 1754 aa16.48■□□□□ 0.23
CSNK1E-213ENST00000495232 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 A0A0G2JS52 829 aa16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 MYT1Q01538 1121 aa16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 IP6K1Q92551 441 aa16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
CSNK1E-213ENST00000495232 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.23
CSNK1E-213ENST00000495232 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.23
CSNK1E-213ENST00000495232 RGPD5Q99666 1765 aa16.46■□□□□ 0.23
CSNK1E-213ENST00000495232 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
CSNK1E-213ENST00000495232 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
CSNK1E-213ENST00000495232 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
CSNK1E-213ENST00000495232 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-213ENST00000495232 HOXC9P31274 260 aa16.45■□□□□ 0.22
CSNK1E-213ENST00000495232 RTL1A6NKG5 1358 aa16.45■□□□□ 0.22
CSNK1E-213ENST00000495232 CDK12Q9NYV4 1490 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-213ENST00000495232 CRB1P82279 1406 aa16.45■□□□□ 0.22
CSNK1E-213ENST00000495232 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
CSNK1E-213ENST00000495232 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
CSNK1E-213ENST00000495232 GLI3P10071 1580 aa16.44■□□□□ 0.22
CSNK1E-213ENST00000495232 FAM98CQ17RN3 349 aaKnown RBP16.44■□□□□ 0.22
CSNK1E-213ENST00000495232 ANKRD24Q8TF21 1146 aa16.44■□□□□ 0.22
CSNK1E-213ENST00000495232 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-213ENST00000495232 FLT4P35916 1363 aa16.43■□□□□ 0.22
CSNK1E-213ENST00000495232 KIF24Q5T7B8 1368 aa16.43■□□□□ 0.22
CSNK1E-213ENST00000495232 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-213ENST00000495232 LTV1Q96GA3 475 aaPredicted RBP16.43■□□□□ 0.22
CSNK1E-213ENST00000495232 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-213ENST00000495232 ERBB3P21860 1342 aa16.43■□□□□ 0.22
CSNK1E-213ENST00000495232 TCP11L2Q8N4U5 519 aa16.42■□□□□ 0.22
CSNK1E-213ENST00000495232 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
CSNK1E-213ENST00000495232 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-213ENST00000495232 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
CSNK1E-213ENST00000495232 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-213ENST00000495232 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
CSNK1E-213ENST00000495232 NLRP2Q9NX02 1062 aa16.41■□□□□ 0.22
CSNK1E-213ENST00000495232 RGS12O14924 1447 aa16.41■□□□□ 0.22
CSNK1E-213ENST00000495232 SEPT12Q8IYM1 358 aa16.4■□□□□ 0.22
CSNK1E-213ENST00000495232 POLKQ9UBT6 870 aa16.4■□□□□ 0.22
CSNK1E-213ENST00000495232 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-213ENST00000495232 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.21
CSNK1E-213ENST00000495232 BARGINQ6ZT62 677 aa16.39■□□□□ 0.21
CSNK1E-213ENST00000495232 INSRP06213 1382 aa16.38■□□□□ 0.21
CSNK1E-213ENST00000495232 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-213ENST00000495232 PEAK1Q9H792 1746 aa16.37■□□□□ 0.21
CSNK1E-213ENST00000495232 CDCA7Q9BWT1 371 aaPredicted RBP16.36■□□□□ 0.21
CSNK1E-213ENST00000495232 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
CSNK1E-213ENST00000495232 KRT27Q7Z3Y8 459 aa16.34■□□□□ 0.21
CSNK1E-213ENST00000495232 MTHFSP49914 203 aa16.33■□□□□ 0.2
CSNK1E-213ENST00000495232 THSD7AQ9UPZ6 1657 aa16.33■□□□□ 0.2
CSNK1E-213ENST00000495232 IL2RBP14784 551 aa16.32■□□□□ 0.2
CSNK1E-213ENST00000495232 DDB1Q16531 1140 aa16.32■□□□□ 0.2
CSNK1E-213ENST00000495232 BRWD3Q6RI45 1802 aa16.32■□□□□ 0.2
CSNK1E-213ENST00000495232 SOCS7O14512 581 aa16.31■□□□□ 0.2
CSNK1E-213ENST00000495232 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
CSNK1E-213ENST00000495232 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
CSNK1E-213ENST00000495232 RGPD2P0DJD1 1756 aa16.31■□□□□ 0.2
CSNK1E-213ENST00000495232 EXOC5O00471 708 aa16.3■□□□□ 0.2
CSNK1E-213ENST00000495232 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-213ENST00000495232 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
CSNK1E-213ENST00000495232 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
CSNK1E-213ENST00000495232 WNK3Q9BYP7 1800 aa16.3■□□□□ 0.2
CSNK1E-213ENST00000495232 PARP4Q9UKK3 1724 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-213ENST00000495232 CFAP53Q96M91 514 aa16.29■□□□□ 0.2
CSNK1E-213ENST00000495232 PPP2R1AP30153 589 aa16.28■□□□□ 0.2
CSNK1E-213ENST00000495232 RALBP1Q15311 655 aa16.28■□□□□ 0.2
CSNK1E-213ENST00000495232 EP400Q96L91 3159 aa16.28■□□□□ 0.2
CSNK1E-213ENST00000495232 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
CSNK1E-213ENST00000495232 TATP17735 454 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-213ENST00000495232 EYA1Q99502 592 aa16.27■□□□□ 0.2
CSNK1E-213ENST00000495232 DISP2A7MBM2 1401 aa16.27■□□□□ 0.19
CSNK1E-213ENST00000495232 LRRC37A3O60309 1634 aa16.26■□□□□ 0.19
CSNK1E-213ENST00000495232 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
CSNK1E-213ENST00000495232 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
CSNK1E-213ENST00000495232 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
CSNK1E-213ENST00000495232 IL13P35225 146 aa16.24■□□□□ 0.19
CSNK1E-213ENST00000495232 TNS2Q63HR2 1409 aa16.24■□□□□ 0.19
CSNK1E-213ENST00000495232 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
CSNK1E-213ENST00000495232 ZCRB1Q8TBF4 217 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-213ENST00000495232 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
CSNK1E-213ENST00000495232 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-213ENST00000495232 CCDC125Q86Z20 511 aa16.22■□□□□ 0.19
CSNK1E-213ENST00000495232 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-213ENST00000495232 UPF1Q92900 1129 aaKnown RBP eCLIP16.22■□□□□ 0.19
CSNK1E-213ENST00000495232 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
CSNK1E-213ENST00000495232 MEGF6O75095 1541 aa16.22■□□□□ 0.19
CSNK1E-213ENST00000495232 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms