RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 RGS12O14924 1447 aa22.36■■□□□ 1.17
YIF1A-209ENST00000494836 COL5A2P05997 1499 aaPredicted RBP22.35■■□□□ 1.17
YIF1A-209ENST00000494836 EVA1CP58658 441 aa22.35■■□□□ 1.17
YIF1A-209ENST00000494836 SPATA31A5Q5VU36 1347 aa22.31■■□□□ 1.16
YIF1A-209ENST00000494836 SPATA31A7Q8IWB4 1347 aa22.31■■□□□ 1.16
YIF1A-209ENST00000494836 AXIN2Q9Y2T1 843 aa22.31■■□□□ 1.16
YIF1A-209ENST00000494836 KNSTRNQ9Y448 316 aa22.3■■□□□ 1.16
YIF1A-209ENST00000494836 ANKRD26Q9UPS8 1709 aa22.3■■□□□ 1.16
YIF1A-209ENST00000494836 RGPD5Q99666 1765 aa22.3■■□□□ 1.16
YIF1A-209ENST00000494836 LARP1Q6PKG0 1096 aaKnown RBP22.29■■□□□ 1.16
YIF1A-209ENST00000494836 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
YIF1A-209ENST00000494836 NSD2O96028 1365 aa22.28■■□□□ 1.16
YIF1A-209ENST00000494836 MAP3K19Q56UN5 1328 aa22.28■■□□□ 1.16
YIF1A-209ENST00000494836 SOCS7O14512 581 aa22.27■■□□□ 1.16
YIF1A-209ENST00000494836 FBLN1P23142 703 aa22.27■■□□□ 1.16
YIF1A-209ENST00000494836 CRB1P82279 1406 aa22.27■■□□□ 1.16
YIF1A-209ENST00000494836 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
YIF1A-209ENST00000494836 FAM98CQ17RN3 349 aaKnown RBP22.26■■□□□ 1.15
YIF1A-209ENST00000494836 USP35Q9P2H5 1018 aa22.26■■□□□ 1.15
YIF1A-209ENST00000494836 WDR17Q8IZU2 1322 aa22.26■■□□□ 1.15
YIF1A-209ENST00000494836 CSB-PGBD3P0DP91 1061 aa22.25■■□□□ 1.15
YIF1A-209ENST00000494836 RRS1Q15050 365 aaKnown RBP22.25■■□□□ 1.15
YIF1A-209ENST00000494836 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
YIF1A-209ENST00000494836 A0A0G2JS52 829 aa22.24■■□□□ 1.15
YIF1A-209ENST00000494836 ONECUT3O60422 494 aaPredicted RBP22.24■■□□□ 1.15
YIF1A-209ENST00000494836 AMPHP49418 695 aa22.24■■□□□ 1.15
YIF1A-209ENST00000494836 MYT1Q01538 1121 aa22.24■■□□□ 1.15
YIF1A-209ENST00000494836 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
YIF1A-209ENST00000494836 SEPT12Q8IYM1 358 aa22.24■■□□□ 1.15
YIF1A-209ENST00000494836 IP6K1Q92551 441 aa22.24■■□□□ 1.15
YIF1A-209ENST00000494836 ERBB3P21860 1342 aa22.23■■□□□ 1.15
YIF1A-209ENST00000494836 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
YIF1A-209ENST00000494836 THSD7AQ9UPZ6 1657 aa22.22■■□□□ 1.15
YIF1A-209ENST00000494836 HOXC9P31274 260 aa22.21■■□□□ 1.15
YIF1A-209ENST00000494836 AMER1Q5JTC6 1135 aaPredicted RBP22.21■■□□□ 1.15
YIF1A-209ENST00000494836 ANKRD24Q8TF21 1146 aa22.21■■□□□ 1.15
YIF1A-209ENST00000494836 THRAP3Q9Y2W1 955 aaKnown RBP22.21■■□□□ 1.15
YIF1A-209ENST00000494836 KIF24Q5T7B8 1368 aa22.21■■□□□ 1.15
YIF1A-209ENST00000494836 PER1O15534 1290 aaPredicted RBP22.2■■□□□ 1.14
YIF1A-209ENST00000494836 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
YIF1A-209ENST00000494836 TNNT2P45379 298 aaPredicted RBP22.19■■□□□ 1.14
YIF1A-209ENST00000494836 MORC1Q86VD1 984 aa22.19■■□□□ 1.14
YIF1A-209ENST00000494836 FLT4P35916 1363 aa22.19■■□□□ 1.14
YIF1A-209ENST00000494836 PEAK1Q9H792 1746 aa22.19■■□□□ 1.14
YIF1A-209ENST00000494836 BRWD3Q6RI45 1802 aa22.19■■□□□ 1.14
YIF1A-209ENST00000494836 FAM208AQ9UK61 1670 aaKnown RBP22.18■■□□□ 1.14
YIF1A-209ENST00000494836 CARD10Q9BWT7 1032 aa22.18■■□□□ 1.14
YIF1A-209ENST00000494836 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
YIF1A-209ENST00000494836 MAP2P11137 1827 aaKnown RBP22.16■■□□□ 1.14
YIF1A-209ENST00000494836 LTV1Q96GA3 475 aaPredicted RBP22.16■■□□□ 1.14
YIF1A-209ENST00000494836 NLRP2Q9NX02 1062 aa22.16■■□□□ 1.14
YIF1A-209ENST00000494836 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
YIF1A-209ENST00000494836 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
YIF1A-209ENST00000494836 INSRP06213 1382 aa22.15■■□□□ 1.14
YIF1A-209ENST00000494836 PPM1GO15355 546 aaPredicted RBP22.15■■□□□ 1.14
YIF1A-209ENST00000494836 NPC1L1Q9UHC9 1359 aa22.14■■□□□ 1.14
YIF1A-209ENST00000494836 KRT27Q7Z3Y8 459 aa22.14■■□□□ 1.13
YIF1A-209ENST00000494836 POLKQ9UBT6 870 aa22.14■■□□□ 1.13
YIF1A-209ENST00000494836 PARP4Q9UKK3 1724 aaKnown RBP22.14■■□□□ 1.13
YIF1A-209ENST00000494836 HSP90AB2PQ58FF8 381 aa22.13■■□□□ 1.13
YIF1A-209ENST00000494836 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
YIF1A-209ENST00000494836 EP400Q96L91 3159 aa22.12■■□□□ 1.13
YIF1A-209ENST00000494836 CDCA7Q9BWT1 371 aaPredicted RBP22.11■■□□□ 1.13
YIF1A-209ENST00000494836 LRRC37A3O60309 1634 aa22.1■■□□□ 1.13
YIF1A-209ENST00000494836 DISP2A7MBM2 1401 aa22.1■■□□□ 1.13
YIF1A-209ENST00000494836 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
YIF1A-209ENST00000494836 RGPD2P0DJD1 1756 aa22.08■■□□□ 1.13
YIF1A-209ENST00000494836 PDE3BQ13370 1112 aa22.08■■□□□ 1.13
YIF1A-209ENST00000494836 DDB1Q16531 1140 aa22.06■■□□□ 1.12
YIF1A-209ENST00000494836 UPF1Q92900 1129 aaKnown RBP eCLIP22.06■■□□□ 1.12
YIF1A-209ENST00000494836 IL2RBP14784 551 aa22.05■■□□□ 1.12
YIF1A-209ENST00000494836 NBPF6Q5VWK0 638 aa22.04■■□□□ 1.12
YIF1A-209ENST00000494836 NBPF4Q96M43 638 aa22.04■■□□□ 1.12
YIF1A-209ENST00000494836 TNS2Q63HR2 1409 aa22.04■■□□□ 1.12
YIF1A-209ENST00000494836 FAM182BQ5T319 152 aa22.03■■□□□ 1.12
YIF1A-209ENST00000494836 DDX10Q13206 875 aaKnown RBP22.02■■□□□ 1.12
YIF1A-209ENST00000494836 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
YIF1A-209ENST00000494836 EXOC5O00471 708 aa22.01■■□□□ 1.11
YIF1A-209ENST00000494836 EIF4A2Q14240 407 aaKnown RBP22.01■■□□□ 1.11
YIF1A-209ENST00000494836 OVOS2A0A0G2JMS6 1433 aa21.99■■□□□ 1.11
YIF1A-209ENST00000494836 MTHFSP49914 203 aa21.99■■□□□ 1.11
YIF1A-209ENST00000494836 FAM196AQ6ZSG2 479 aa21.99■■□□□ 1.11
YIF1A-209ENST00000494836 MEGF6O75095 1541 aa21.99■■□□□ 1.11
YIF1A-209ENST00000494836 NCAPD2Q15021 1401 aa21.98■■□□□ 1.11
YIF1A-209ENST00000494836 CCDC125Q86Z20 511 aa21.97■■□□□ 1.11
YIF1A-209ENST00000494836 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
YIF1A-209ENST00000494836 EYA1Q99502 592 aa21.97■■□□□ 1.11
YIF1A-209ENST00000494836 MARCH10Q8NA82 808 aaPredicted RBP21.95■■□□□ 1.1
YIF1A-209ENST00000494836 RGPD1P0DJD0 1748 aa21.94■■□□□ 1.1
YIF1A-209ENST00000494836 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
YIF1A-209ENST00000494836 TATP17735 454 aaPredicted RBP21.94■■□□□ 1.1
YIF1A-209ENST00000494836 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
YIF1A-209ENST00000494836 SF3B2Q13435 895 aaKnown RBP21.93■■□□□ 1.1
YIF1A-209ENST00000494836 PARD3Q8TEW0 1356 aa21.92■■□□□ 1.1
YIF1A-209ENST00000494836 BCL9O00512 1426 aa21.91■■□□□ 1.1
YIF1A-209ENST00000494836 PPP2R1AP30153 589 aa21.91■■□□□ 1.1
YIF1A-209ENST00000494836 IL13P35225 146 aa21.91■■□□□ 1.1
YIF1A-209ENST00000494836 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
YIF1A-209ENST00000494836 SHANK3Q9BYB0 1731 aa21.91■■□□□ 1.1
YIF1A-209ENST00000494836 TNS1Q9HBL0 1735 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms