RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
GPATCH4-207ENST00000494414 TTC21BQ7Z4L5 1316 aa11.78□□□□□ -0.52
GPATCH4-207ENST00000494414 KTN1Q86UP2 1357 aaKnown RBP11.78□□□□□ -0.52
GPATCH4-207ENST00000494414 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 VASPP50552 380 aaPredicted RBP11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 MEX3CQ5U5Q3 659 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 MIER1Q8N108 512 aa11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 CABLES1Q8TDN4 633 aa11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 C8orf37Q96NL8 207 aa11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 KIAA0232Q92628 1395 aa11.77□□□□□ -0.53
GPATCH4-207ENST00000494414 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-207ENST00000494414 SOCS7O14512 581 aa11.76□□□□□ -0.53
GPATCH4-207ENST00000494414 AATKQ6ZMQ8 1374 aa11.75□□□□□ -0.53
GPATCH4-207ENST00000494414 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
GPATCH4-207ENST00000494414 PEAK1Q9H792 1746 aa11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 FAM83GA6ND36 823 aa11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 RBM6P78332 1123 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 TMF1P82094 1093 aa11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 UNC5CLQ8IV45 518 aa11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 SLC12A5Q9H2X9 1139 aa11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 USP21Q9UK80 565 aa11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 TRPC5Q9UL62 973 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-207ENST00000494414 VPS72Q15906 364 aa11.73□□□□□ -0.53
GPATCH4-207ENST00000494414 NGLY1Q96IV0 654 aa11.73□□□□□ -0.53
GPATCH4-207ENST00000494414 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-207ENST00000494414 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
GPATCH4-207ENST00000494414 NLRP13Q86W25 1043 aa11.72□□□□□ -0.53
GPATCH4-207ENST00000494414 ABTB2Q8N961 1025 aa11.72□□□□□ -0.53
GPATCH4-207ENST00000494414 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
GPATCH4-207ENST00000494414 GCP02774 474 aa11.71□□□□□ -0.53
GPATCH4-207ENST00000494414 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
GPATCH4-207ENST00000494414 EIF4G2P78344 907 aaKnown RBP eCLIP11.71□□□□□ -0.53
GPATCH4-207ENST00000494414 CDCA8Q53HL2 280 aa11.71□□□□□ -0.53
GPATCH4-207ENST00000494414 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
GPATCH4-207ENST00000494414 RXRBP28702 533 aa11.7□□□□□ -0.54
GPATCH4-207ENST00000494414 GJD4Q96KN9 370 aaPredicted RBP11.7□□□□□ -0.54
GPATCH4-207ENST00000494414 QTRT2Q9H974 415 aaKnown RBP11.7□□□□□ -0.54
GPATCH4-207ENST00000494414 TERF2IPQ9NYB0 399 aa11.7□□□□□ -0.54
GPATCH4-207ENST00000494414 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 RGPD2P0DJD1 1756 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 SPATA31A5Q5VU36 1347 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 SPATA31A7Q8IWB4 1347 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 ARHGEF25Q86VW2 580 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 SBF2Q86WG5 1849 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 RGPD1P0DJD0 1748 aa11.69□□□□□ -0.54
GPATCH4-207ENST00000494414 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 NLRP6P59044 892 aa11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 NME9Q86XW9 330 aa11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 BLMP54132 1417 aaPredicted RBP11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 NCAPD2Q15021 1401 aa11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 NSD3Q9BZ95 1437 aa11.68□□□□□ -0.54
GPATCH4-207ENST00000494414 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 MYT1Q01538 1121 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 CARD14Q9BXL6 1004 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 BTG4Q9NY30 223 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 CRB1P82279 1406 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
GPATCH4-207ENST00000494414 SPATA31A1Q5TZJ5 1347 aa11.66□□□□□ -0.54
GPATCH4-207ENST00000494414 C11orf95C9JLR9 678 aaPredicted RBP11.66□□□□□ -0.54
GPATCH4-207ENST00000494414 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
GPATCH4-207ENST00000494414 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
GPATCH4-207ENST00000494414 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
GPATCH4-207ENST00000494414 KIF24Q5T7B8 1368 aa11.66□□□□□ -0.54
GPATCH4-207ENST00000494414 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
GPATCH4-207ENST00000494414 TMC1Q8TDI8 760 aa11.65□□□□□ -0.54
GPATCH4-207ENST00000494414 KIF7Q2M1P5 1343 aa11.64□□□□□ -0.55
GPATCH4-207ENST00000494414 PKD1L3Q7Z443 1732 aa11.64□□□□□ -0.55
GPATCH4-207ENST00000494414 FYB1O15117 783 aa11.64□□□□□ -0.55
GPATCH4-207ENST00000494414 ZC3H6P61129 1189 aaKnown RBP11.64□□□□□ -0.55
GPATCH4-207ENST00000494414 CHRNA2Q15822 529 aa11.64□□□□□ -0.55
GPATCH4-207ENST00000494414 RREB1Q92766 1687 aa11.64□□□□□ -0.55
GPATCH4-207ENST00000494414 NSD2O96028 1365 aa11.64□□□□□ -0.55
GPATCH4-207ENST00000494414 WDR17Q8IZU2 1322 aa11.63□□□□□ -0.55
GPATCH4-207ENST00000494414 BARGINQ6ZT62 677 aa11.63□□□□□ -0.55
GPATCH4-207ENST00000494414 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
GPATCH4-207ENST00000494414 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
GPATCH4-207ENST00000494414 ERBB3P21860 1342 aa11.62□□□□□ -0.55
GPATCH4-207ENST00000494414 BCL9O00512 1426 aa11.62□□□□□ -0.55
GPATCH4-207ENST00000494414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
GPATCH4-207ENST00000494414 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
GPATCH4-207ENST00000494414 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
GPATCH4-207ENST00000494414 THRAP3Q9Y2W1 955 aaKnown RBP11.61□□□□□ -0.55
GPATCH4-207ENST00000494414 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
GPATCH4-207ENST00000494414 TNS2Q63HR2 1409 aa11.6□□□□□ -0.55
GPATCH4-207ENST00000494414 NPC1L1Q9UHC9 1359 aa11.6□□□□□ -0.55
GPATCH4-207ENST00000494414 LARP1Q6PKG0 1096 aaKnown RBP11.6□□□□□ -0.55
GPATCH4-207ENST00000494414 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms