RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, human

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG7-208	ENST00000493609	SERPINA10	Q9UK55	444 aa		11.39	□□□□□ -0.59
SMG7-208	ENST00000493609	DACH1	Q9UI36	760 aa		11.38	□□□□□ -0.59
SMG7-208	ENST00000493609	WNT7B	P56706	349 aa		11.37	□□□□□ -0.59
SMG7-208	ENST00000493609	DZIP3	Q86Y13	1208 aa	Known RBP	11.36	□□□□□ -0.59
SMG7-208	ENST00000493609	UCN2	Q96RP3	112 aa		11.36	□□□□□ -0.59
SMG7-208	ENST00000493609	AVP	P01185	164 aa		11.35	□□□□□ -0.59
SMG7-208	ENST00000493609	RC3H1	Q5TC82	1133 aa	Known RBP	11.35	□□□□□ -0.59
SMG7-208	ENST00000493609	C1QTNF2	Q9BXJ5	285 aa		11.35	□□□□□ -0.59
SMG7-208	ENST00000493609	CRIPAK	Q8N1N5	446 aa		11.34	□□□□□ -0.59
SMG7-208	ENST00000493609	EHBP1	Q8NDI1	1231 aa		11.34	□□□□□ -0.59
SMG7-208	ENST00000493609	CEP126	Q9P2H0	1117 aa		11.34	□□□□□ -0.59
SMG7-208	ENST00000493609	PIK3CD	O00329	1044 aa		11.33	□□□□□ -0.6
SMG7-208	ENST00000493609	TTC24	A2A3L6	582 aa	Predicted RBP	11.32	□□□□□ -0.6
SMG7-208	ENST00000493609	VARS	P26640	1264 aa	Known RBP	11.32	□□□□□ -0.6
SMG7-208	ENST00000493609	SLC10A4	Q96EP9	437 aa		11.32	□□□□□ -0.6
SMG7-208	ENST00000493609	PPP1R12C	Q9BZL4	782 aa		11.32	□□□□□ -0.6
SMG7-208	ENST00000493609	WNT7A	O00755	349 aa		11.31	□□□□□ -0.6
SMG7-208	ENST00000493609	MCCD1	P59942	119 aa	Predicted RBP	11.31	□□□□□ -0.6
SMG7-208	ENST00000493609	TBC1D9	Q6ZT07	1266 aa		11.31	□□□□□ -0.6
SMG7-208	ENST00000493609	FAM174A	Q8TBP5	190 aa		11.31	□□□□□ -0.6
SMG7-208	ENST00000493609	TFIP11	Q9UBB9	837 aa	Known RBP	11.31	□□□□□ -0.6
SMG7-208	ENST00000493609	PALM3	A6NDB9	673 aa	Predicted RBP	11.3	□□□□□ -0.6
SMG7-208	ENST00000493609	AXIN1	O15169	862 aa		11.3	□□□□□ -0.6
SMG7-208	ENST00000493609	GIGYF1	O75420	1035 aa	Predicted RBP	11.3	□□□□□ -0.6
SMG7-208	ENST00000493609	TRMT44	Q8IYL2	757 aa	Known RBP	11.3	□□□□□ -0.6
SMG7-208	ENST00000493609	SMPD1	P17405	629 aa		11.29	□□□□□ -0.6
SMG7-208	ENST00000493609	RFX1	P22670	979 aa		11.29	□□□□□ -0.6
SMG7-208	ENST00000493609	ZNF592	Q92610	1267 aa		11.29	□□□□□ -0.6
SMG7-208	ENST00000493609	ARID5B	Q14865	1188 aa		11.28	□□□□□ -0.6
SMG7-208	ENST00000493609	SLFNL1	Q499Z3	407 aa		11.28	□□□□□ -0.6
SMG7-208	ENST00000493609	CFAP70	Q5T0N1	1121 aa		11.28	□□□□□ -0.6
SMG7-208	ENST00000493609	PHTF2	Q8N3S3	785 aa		11.28	□□□□□ -0.6
SMG7-208	ENST00000493609	SNIP1	Q8TAD8	396 aa	Known RBP	11.28	□□□□□ -0.6
SMG7-208	ENST00000493609	MRGPRX2	Q96LB1	330 aa		11.28	□□□□□ -0.6
SMG7-208	ENST00000493609	SIAH2	O43255	324 aa		11.27	□□□□□ -0.61
SMG7-208	ENST00000493609	SMCP	P49901	116 aa	Predicted RBP	11.27	□□□□□ -0.61
SMG7-208	ENST00000493609	CTC1	Q2NKJ3	1217 aa		11.27	□□□□□ -0.61
SMG7-208	ENST00000493609	GMPR2	Q9P2T1	348 aa	Known RBP	11.27	□□□□□ -0.61
SMG7-208	ENST00000493609	TLL2	Q9Y6L7	1015 aa		11.27	□□□□□ -0.61
SMG7-208	ENST00000493609		J3QL48	77 aa		11.26	□□□□□ -0.61
SMG7-208	ENST00000493609	SKI	P12755	728 aa		11.26	□□□□□ -0.61
SMG7-208	ENST00000493609	LMOD1	P29536	600 aa	Predicted RBP	11.26	□□□□□ -0.61
SMG7-208	ENST00000493609	TSGA10IP	Q3SY00	556 aa		11.26	□□□□□ -0.61
SMG7-208	ENST00000493609	RNF135	Q8IUD6	432 aa		11.26	□□□□□ -0.61
SMG7-208	ENST00000493609	ATP9B	O43861	1147 aa		11.25	□□□□□ -0.61
SMG7-208	ENST00000493609	NBPF20	Q3BBV1	942 aa		11.25	□□□□□ -0.61
SMG7-208	ENST00000493609	VASH1	Q7L8A9	365 aa	Predicted RBP	11.25	□□□□□ -0.61
SMG7-208	ENST00000493609	KCTD15	Q96SI1	283 aa	Predicted RBP	11.25	□□□□□ -0.61
SMG7-208	ENST00000493609	RAB15	P59190	212 aa		11.24	□□□□□ -0.61
SMG7-208	ENST00000493609	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.24	□□□□□ -0.61
SMG7-208	ENST00000493609	DEPDC4	Q8N2C3	294 aa		11.23	□□□□□ -0.61
SMG7-208	ENST00000493609	NFATC2IP	Q8NCF5	419 aa		11.23	□□□□□ -0.61
SMG7-208	ENST00000493609	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.23	□□□□□ -0.61
SMG7-208	ENST00000493609	CDK15	Q96Q40	435 aa		11.23	□□□□□ -0.61
SMG7-208	ENST00000493609	CDV3	Q9UKY7	258 aa	Known RBP	11.23	□□□□□ -0.61
SMG7-208	ENST00000493609	ESPN	B1AK53	854 aa		11.22	□□□□□ -0.61
SMG7-208	ENST00000493609	C11orf95	C9JLR9	678 aa	Predicted RBP	11.22	□□□□□ -0.61
SMG7-208	ENST00000493609	GRM5	P41594	1212 aa		11.22	□□□□□ -0.61
SMG7-208	ENST00000493609	TREML4	Q6UXN2	200 aa		11.22	□□□□□ -0.61
SMG7-208	ENST00000493609	PLPP7	Q8NBV4	271 aa		11.22	□□□□□ -0.61
SMG7-208	ENST00000493609	MAP4K5	Q9Y4K4	846 aa		11.22	□□□□□ -0.61
SMG7-208	ENST00000493609	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.21	□□□□□ -0.61
SMG7-208	ENST00000493609	USP17L5	A8MUK1	530 aa		11.21	□□□□□ -0.61
SMG7-208	ENST00000493609	CDCA8	Q53HL2	280 aa		11.2	□□□□□ -0.62
SMG7-208	ENST00000493609	INTS6L	Q5JSJ4	861 aa	Known RBP	11.2	□□□□□ -0.62
SMG7-208	ENST00000493609	LCE2A	Q5TA79	106 aa	Predicted RBP	11.2	□□□□□ -0.62
SMG7-208	ENST00000493609	RNF20	Q5VTR2	975 aa		11.2	□□□□□ -0.62
SMG7-208	ENST00000493609	HPS1	Q92902	700 aa		11.2	□□□□□ -0.62
SMG7-208	ENST00000493609	CHIC2	Q9UKJ5	165 aa		11.2	□□□□□ -0.62
SMG7-208	ENST00000493609	USP17L3	A6NCW0	530 aa		11.19	□□□□□ -0.62
SMG7-208	ENST00000493609	USP17L4	A6NCW7	530 aa		11.19	□□□□□ -0.62
SMG7-208	ENST00000493609	FSHR	P23945	695 aa		11.19	□□□□□ -0.62
SMG7-208	ENST00000493609	USP17L2	Q6R6M4	530 aa		11.19	□□□□□ -0.62
SMG7-208	ENST00000493609	USP17L1	Q7RTZ2	530 aa		11.19	□□□□□ -0.62
SMG7-208	ENST00000493609	MPND	Q8N594	471 aa		11.19	□□□□□ -0.62
SMG7-208	ENST00000493609	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.19	□□□□□ -0.62
SMG7-208	ENST00000493609	ALDH1A1	P00352	501 aa		11.18	□□□□□ -0.62
SMG7-208	ENST00000493609	SRPK2	P78362	688 aa	Known RBP	11.18	□□□□□ -0.62
SMG7-208	ENST00000493609	NCOA4	Q13772	614 aa		11.18	□□□□□ -0.62
SMG7-208	ENST00000493609	SEPT12	Q8IYM1	358 aa		11.18	□□□□□ -0.62
SMG7-208	ENST00000493609	DOLK	Q9UPQ8	538 aa		11.18	□□□□□ -0.62
SMG7-208	ENST00000493609	ADH1C	P00326	375 aa		11.17	□□□□□ -0.62
SMG7-208	ENST00000493609	MAP7D1	Q3KQU3	841 aa		11.17	□□□□□ -0.62
SMG7-208	ENST00000493609	ATP13A2	Q9NQ11	1180 aa		11.17	□□□□□ -0.62
SMG7-208	ENST00000493609	PCDHB11	Q9Y5F2	797 aa		11.17	□□□□□ -0.62
SMG7-208	ENST00000493609	ERVH48-1	M5A8F1	160 aa		11.16	□□□□□ -0.62
SMG7-208	ENST00000493609	OXLD1	Q5BKU9	147 aa		11.16	□□□□□ -0.62
SMG7-208	ENST00000493609	PLEKHM2	Q8IWE5	1019 aa		11.16	□□□□□ -0.62
SMG7-208	ENST00000493609	PBXIP1	Q96AQ6	731 aa		11.16	□□□□□ -0.62
SMG7-208	ENST00000493609	ARX	Q96QS3	562 aa		11.16	□□□□□ -0.62
SMG7-208	ENST00000493609	KANK4	Q5T7N3	995 aa	Predicted RBP	11.15	□□□□□ -0.62
SMG7-208	ENST00000493609	NR3C2	P08235	984 aa		11.14	□□□□□ -0.63
SMG7-208	ENST00000493609	VRTN	Q9H8Y1	702 aa		11.14	□□□□□ -0.63
SMG7-208	ENST00000493609	TMPRSS4	Q9NRS4	437 aa		11.14	□□□□□ -0.63
SMG7-208	ENST00000493609	PPP1R15A	O75807	674 aa	Predicted RBP	11.13	□□□□□ -0.63
SMG7-208	ENST00000493609	NR5A1	Q13285	461 aa		11.13	□□□□□ -0.63
SMG7-208	ENST00000493609	EML3	Q32P44	896 aa		11.13	□□□□□ -0.63
SMG7-208	ENST00000493609	MKRN1	Q9UHC7	482 aa	Known RBP	11.13	□□□□□ -0.63
SMG7-208	ENST00000493609	SNRPB	P14678	240 aa	Known RBP	11.12	□□□□□ -0.63
SMG7-208	ENST00000493609	HOMEZ	Q8IX15	550 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms