RNA–Protein interactions for RNA: ENST00000491311.1

CDK11A-219, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-219ENST00000491311 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
CDK11A-219ENST00000491311 SPATA31A6Q5VVP1 1343 aa20.42■□□□□ 0.86
CDK11A-219ENST00000491311 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
CDK11A-219ENST00000491311 CPDO75976 1380 aa20.41■□□□□ 0.86
CDK11A-219ENST00000491311 FLT4P35916 1363 aa20.41■□□□□ 0.86
CDK11A-219ENST00000491311 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
CDK11A-219ENST00000491311 HOXC9P31274 260 aa20.4■□□□□ 0.86
CDK11A-219ENST00000491311 RTL1A6NKG5 1358 aa20.39■□□□□ 0.85
CDK11A-219ENST00000491311 SOCS7O14512 581 aa20.39■□□□□ 0.85
CDK11A-219ENST00000491311 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
CDK11A-219ENST00000491311 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
CDK11A-219ENST00000491311 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
CDK11A-219ENST00000491311 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
CDK11A-219ENST00000491311 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
CDK11A-219ENST00000491311 MEX3CQ5U5Q3 659 aaKnown RBP20.37■□□□□ 0.85
CDK11A-219ENST00000491311 IP6K1Q92551 441 aa20.37■□□□□ 0.85
CDK11A-219ENST00000491311 AXIN2Q9Y2T1 843 aa20.37■□□□□ 0.85
CDK11A-219ENST00000491311 CAMTA1Q9Y6Y1 1673 aa20.37■□□□□ 0.85
CDK11A-219ENST00000491311 ABCC6O95255 1503 aa20.37■□□□□ 0.85
CDK11A-219ENST00000491311 NRAPQ86VF7 1730 aa20.36■□□□□ 0.85
CDK11A-219ENST00000491311 C8orf37Q96NL8 207 aa20.35■□□□□ 0.85
CDK11A-219ENST00000491311 NWD2Q9ULI1 1742 aa20.35■□□□□ 0.85
CDK11A-219ENST00000491311 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
CDK11A-219ENST00000491311 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
CDK11A-219ENST00000491311 INSRP06213 1382 aa20.34■□□□□ 0.85
CDK11A-219ENST00000491311 FAM208AQ9UK61 1670 aaKnown RBP20.33■□□□□ 0.85
CDK11A-219ENST00000491311 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.85
CDK11A-219ENST00000491311 CCER2I3L3R5 266 aa20.32■□□□□ 0.84
CDK11A-219ENST00000491311 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
CDK11A-219ENST00000491311 STRN4Q9NRL3 753 aa20.32■□□□□ 0.84
CDK11A-219ENST00000491311 BTG4Q9NY30 223 aa20.32■□□□□ 0.84
CDK11A-219ENST00000491311 COL5A2P05997 1499 aaPredicted RBP20.31■□□□□ 0.84
CDK11A-219ENST00000491311 RGPD1P0DJD0 1748 aa20.31■□□□□ 0.84
CDK11A-219ENST00000491311 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
CDK11A-219ENST00000491311 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
CDK11A-219ENST00000491311 U2SURPO15042 1029 aaKnown RBP20.3■□□□□ 0.84
CDK11A-219ENST00000491311 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
CDK11A-219ENST00000491311 ERBB3P21860 1342 aa20.28■□□□□ 0.84
CDK11A-219ENST00000491311 SLIT2O94813 1529 aa20.28■□□□□ 0.84
CDK11A-219ENST00000491311 IL13P35225 146 aa20.28■□□□□ 0.84
CDK11A-219ENST00000491311 EVA1CP58658 441 aa20.27■□□□□ 0.84
CDK11A-219ENST00000491311 USHBP1Q8N6Y0 703 aa20.27■□□□□ 0.84
CDK11A-219ENST00000491311 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.27■□□□□ 0.83
CDK11A-219ENST00000491311 WDR43Q15061 677 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDK11A-219ENST00000491311 AFF2P51816 1311 aa20.26■□□□□ 0.83
CDK11A-219ENST00000491311 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
CDK11A-219ENST00000491311 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
CDK11A-219ENST00000491311 NLRP2Q9NX02 1062 aa20.25■□□□□ 0.83
CDK11A-219ENST00000491311 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
CDK11A-219ENST00000491311 HMOX1P09601 288 aa20.24■□□□□ 0.83
CDK11A-219ENST00000491311 U2AF1L5P0DN76 240 aaPredicted RBP20.24■□□□□ 0.83
CDK11A-219ENST00000491311 U2AF1Q01081 240 aaKnown RBP eCLIP20.24■□□□□ 0.83
CDK11A-219ENST00000491311 EYA1Q99502 592 aa20.24■□□□□ 0.83
CDK11A-219ENST00000491311 WDR17Q8IZU2 1322 aa20.24■□□□□ 0.83
CDK11A-219ENST00000491311 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
CDK11A-219ENST00000491311 NBPF6Q5VWK0 638 aa20.23■□□□□ 0.83
CDK11A-219ENST00000491311 TOM1L2Q6ZVM7 507 aa20.23■□□□□ 0.83
CDK11A-219ENST00000491311 NBPF4Q96M43 638 aa20.23■□□□□ 0.83
CDK11A-219ENST00000491311 BCL9LQ86UU0 1499 aa20.23■□□□□ 0.83
CDK11A-219ENST00000491311 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
CDK11A-219ENST00000491311 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
CDK11A-219ENST00000491311 USP21Q9UK80 565 aa20.22■□□□□ 0.83
CDK11A-219ENST00000491311 CCDC9Q9Y3X0 531 aaKnown RBP20.22■□□□□ 0.83
CDK11A-219ENST00000491311 USP35Q9P2H5 1018 aa20.21■□□□□ 0.83
CDK11A-219ENST00000491311 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
CDK11A-219ENST00000491311 CRB1P82279 1406 aa20.2■□□□□ 0.82
CDK11A-219ENST00000491311 SULT6B1Q6IMI4 303 aa20.2■□□□□ 0.82
CDK11A-219ENST00000491311 UNC5CLQ8IV45 518 aa20.2■□□□□ 0.82
CDK11A-219ENST00000491311 FNBP4Q8N3X1 1017 aaPredicted RBP20.2■□□□□ 0.82
CDK11A-219ENST00000491311 ADAMTS8Q9UP79 889 aa20.2■□□□□ 0.82
CDK11A-219ENST00000491311 CCDC146Q8IYE0 955 aa20.18■□□□□ 0.82
CDK11A-219ENST00000491311 PARP4Q9UKK3 1724 aaKnown RBP20.17■□□□□ 0.82
CDK11A-219ENST00000491311 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
CDK11A-219ENST00000491311 NCAPD2Q15021 1401 aa20.16■□□□□ 0.82
CDK11A-219ENST00000491311 PRKAR2BP31323 418 aa20.15■□□□□ 0.82
CDK11A-219ENST00000491311 CARD10Q9BWT7 1032 aa20.15■□□□□ 0.82
CDK11A-219ENST00000491311 RSPH6AQ9H0K4 717 aa20.15■□□□□ 0.82
CDK11A-219ENST00000491311 GLI3P10071 1580 aa20.14■□□□□ 0.81
CDK11A-219ENST00000491311 MEGF6O75095 1541 aa20.14■□□□□ 0.81
CDK11A-219ENST00000491311 ATRNO75882 1429 aa20.14■□□□□ 0.81
CDK11A-219ENST00000491311 KDRP35968 1356 aa20.13■□□□□ 0.81
CDK11A-219ENST00000491311 SPATA31A1Q5TZJ5 1347 aa20.13■□□□□ 0.81
CDK11A-219ENST00000491311 SPATA31A5Q5VU36 1347 aa20.13■□□□□ 0.81
CDK11A-219ENST00000491311 SPATA31A7Q8IWB4 1347 aa20.13■□□□□ 0.81
CDK11A-219ENST00000491311 VPS72Q15906 364 aa20.13■□□□□ 0.81
CDK11A-219ENST00000491311 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
CDK11A-219ENST00000491311 DLG5Q8TDM6 1919 aa20.12■□□□□ 0.81
CDK11A-219ENST00000491311 PKD1L3Q7Z443 1732 aa20.1■□□□□ 0.81
CDK11A-219ENST00000491311 FCHSD2O94868 740 aa20.1■□□□□ 0.81
CDK11A-219ENST00000491311 TCP11L2Q8N4U5 519 aa20.1■□□□□ 0.81
CDK11A-219ENST00000491311 RAPGEF4Q8WZA2 1011 aa20.1■□□□□ 0.81
CDK11A-219ENST00000491311 QTRT2Q9H974 415 aaKnown RBP20.1■□□□□ 0.81
CDK11A-219ENST00000491311 TRPC5Q9UL62 973 aaPredicted RBP20.1■□□□□ 0.81
CDK11A-219ENST00000491311 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
CDK11A-219ENST00000491311 MAPK8IP3Q9UPT6 1336 aa20.09■□□□□ 0.81
CDK11A-219ENST00000491311 LRRC37A3O60309 1634 aa20.09■□□□□ 0.81
CDK11A-219ENST00000491311 IL2RBP14784 551 aa20.08■□□□□ 0.81
CDK11A-219ENST00000491311 TATP17735 454 aaPredicted RBP20.08■□□□□ 0.81
CDK11A-219ENST00000491311 ZNF772Q68DY9 489 aaPredicted RBP20.08■□□□□ 0.81
CDK11A-219ENST00000491311 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms