RNA–Protein interactions for RNA: ENST00000491311.1

CDK11A-219, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-219ENST00000491311 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
CDK11A-219ENST00000491311 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
CDK11A-219ENST00000491311 ABCC9O60706 1549 aa30.45■■■□□ 2.47
CDK11A-219ENST00000491311 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
CDK11A-219ENST00000491311 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.35
CDK11A-219ENST00000491311 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
CDK11A-219ENST00000491311 NACADO15069 1562 aa29.52■■■□□ 2.32
CDK11A-219ENST00000491311 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
CDK11A-219ENST00000491311 MYO15BQ96JP2 1530 aa29.42■■■□□ 2.3
CDK11A-219ENST00000491311 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
CDK11A-219ENST00000491311 UNC13AQ9UPW8 1703 aa28.96■■■□□ 2.23
CDK11A-219ENST00000491311 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
CDK11A-219ENST00000491311 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
CDK11A-219ENST00000491311 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
CDK11A-219ENST00000491311 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
CDK11A-219ENST00000491311 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
CDK11A-219ENST00000491311 SMARCA4P51532 1647 aa27.71■■■□□ 2.03
CDK11A-219ENST00000491311 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
CDK11A-219ENST00000491311 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
CDK11A-219ENST00000491311 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
CDK11A-219ENST00000491311 DNAJC5BQ9UF47 199 aa27.52■■■□□ 2
CDK11A-219ENST00000491311 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
CDK11A-219ENST00000491311 WIZO95785 1651 aa27.44■■□□□ 1.98
CDK11A-219ENST00000491311 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
CDK11A-219ENST00000491311 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
CDK11A-219ENST00000491311 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
CDK11A-219ENST00000491311 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
CDK11A-219ENST00000491311 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
CDK11A-219ENST00000491311 NCAPD3P42695 1498 aa27.18■■□□□ 1.94
CDK11A-219ENST00000491311 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
CDK11A-219ENST00000491311 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
CDK11A-219ENST00000491311 CCDC88BA6NC98 1476 aa26.76■■□□□ 1.87
CDK11A-219ENST00000491311 NESP48681 1621 aa26.52■■□□□ 1.84
CDK11A-219ENST00000491311 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
CDK11A-219ENST00000491311 CADPSQ9ULU8 1353 aa26.44■■□□□ 1.82
CDK11A-219ENST00000491311 PRDM2Q13029 1718 aa26.43■■□□□ 1.82
CDK11A-219ENST00000491311 CFTRP13569 1480 aa26.41■■□□□ 1.82
CDK11A-219ENST00000491311 KIF21AQ7Z4S6 1674 aa26.29■■□□□ 1.8
CDK11A-219ENST00000491311 FANCD2Q9BXW9 1451 aa26.21■■□□□ 1.79
CDK11A-219ENST00000491311 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
CDK11A-219ENST00000491311 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
CDK11A-219ENST00000491311 CEP164Q9UPV0 1460 aa26.13■■□□□ 1.77
CDK11A-219ENST00000491311 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
CDK11A-219ENST00000491311 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
CDK11A-219ENST00000491311 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
CDK11A-219ENST00000491311 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
CDK11A-219ENST00000491311 CUX1P39880 1505 aa25.9■■□□□ 1.74
CDK11A-219ENST00000491311 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.74
CDK11A-219ENST00000491311 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
CDK11A-219ENST00000491311 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
CDK11A-219ENST00000491311 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
CDK11A-219ENST00000491311 WDR62O43379 1518 aa25.85■■□□□ 1.73
CDK11A-219ENST00000491311 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
CDK11A-219ENST00000491311 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
CDK11A-219ENST00000491311 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
CDK11A-219ENST00000491311 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
CDK11A-219ENST00000491311 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
CDK11A-219ENST00000491311 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
CDK11A-219ENST00000491311 CUX2O14529 1486 aa25.6■■□□□ 1.69
CDK11A-219ENST00000491311 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
CDK11A-219ENST00000491311 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
CDK11A-219ENST00000491311 SOGA1O94964 1423 aa25.55■■□□□ 1.68
CDK11A-219ENST00000491311 WDR97A6NE52 1622 aa25.54■■□□□ 1.68
CDK11A-219ENST00000491311 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
CDK11A-219ENST00000491311 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
CDK11A-219ENST00000491311 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
CDK11A-219ENST00000491311 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
CDK11A-219ENST00000491311 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
CDK11A-219ENST00000491311 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
CDK11A-219ENST00000491311 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
CDK11A-219ENST00000491311 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.654e-7■■□□□ 13.8
CDK11A-219ENST00000491311 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.65
CDK11A-219ENST00000491311 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
CDK11A-219ENST00000491311 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
CDK11A-219ENST00000491311 GAPVD1Q14C86 1478 aa25.28■■□□□ 1.64
CDK11A-219ENST00000491311 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
CDK11A-219ENST00000491311 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
CDK11A-219ENST00000491311 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
CDK11A-219ENST00000491311 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
CDK11A-219ENST00000491311 EEA1Q15075 1411 aa25.13■■□□□ 1.61
CDK11A-219ENST00000491311 ADAMTS12P58397 1594 aa25.09■■□□□ 1.61
CDK11A-219ENST00000491311 IGF1RP08069 1367 aa25.08■■□□□ 1.61
CDK11A-219ENST00000491311 CUL7Q14999 1698 aa25.08■■□□□ 1.61
CDK11A-219ENST00000491311 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
CDK11A-219ENST00000491311 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
CDK11A-219ENST00000491311 CHD1O14646 1710 aa25.03■■□□□ 1.6
CDK11A-219ENST00000491311 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
CDK11A-219ENST00000491311 CARMIL1Q5VZK9 1371 aa24.98■■□□□ 1.59
CDK11A-219ENST00000491311 EHMT2Q96KQ7 1210 aa24.98■■□□□ 1.59
CDK11A-219ENST00000491311 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
CDK11A-219ENST00000491311 FBLN2P98095 1184 aa24.95■■□□□ 1.58
CDK11A-219ENST00000491311 PRXQ9BXM0 1461 aa24.94■■□□□ 1.58
CDK11A-219ENST00000491311 KIF21BO75037 1637 aa24.94■■□□□ 1.58
CDK11A-219ENST00000491311 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
CDK11A-219ENST00000491311 CHMP7Q8WUX9 453 aaPredicted RBP24.9■■□□□ 1.58
CDK11A-219ENST00000491311 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
CDK11A-219ENST00000491311 GOLGA3Q08378 1498 aa24.82■■□□□ 1.56
CDK11A-219ENST00000491311 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
CDK11A-219ENST00000491311 CTTNBP2Q8WZ74 1663 aa24.78■■□□□ 1.56
CDK11A-219ENST00000491311 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms