RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
PCSK9-202ENST00000490692 HS1BP3Q53T59 392 aa13.88□□□□□ -0.19
PCSK9-202ENST00000490692 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
PCSK9-202ENST00000490692 SECISBP2LQ93073 1101 aaKnown RBP13.88□□□□□ -0.19
PCSK9-202ENST00000490692 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.88□□□□□ -0.195e-7■□□□□ 11.1
PCSK9-202ENST00000490692 V9GYY5 206 aaPredicted RBP13.88□□□□□ -0.19
PCSK9-202ENST00000490692 PATL2C9JE40 543 aaKnown RBP13.88□□□□□ -0.19
PCSK9-202ENST00000490692 NRDCO43847 1150 aa13.88□□□□□ -0.19
PCSK9-202ENST00000490692 GORABQ5T7V8 394 aa13.88□□□□□ -0.19
PCSK9-202ENST00000490692 PRIMPOLQ96LW4 560 aa13.88□□□□□ -0.19
PCSK9-202ENST00000490692 TRAPPC8Q9Y2L5 1435 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 GOLGA6L19H0YKK7 550 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 CCAR2Q8N163 923 aaKnown RBP13.87□□□□□ -0.19
PCSK9-202ENST00000490692 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 GTPBP4Q9BZE4 634 aaKnown RBP13.87□□□□□ -0.19
PCSK9-202ENST00000490692 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 SMC3Q9UQE7 1217 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 HMMRO75330 724 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 NUCB1Q02818 461 aa13.87□□□□□ -0.19
PCSK9-202ENST00000490692 TTC37Q6PGP7 1564 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
PCSK9-202ENST00000490692 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 BECN2A8MW95 431 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 DTNBO60941 627 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 TERF1P54274 439 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
PCSK9-202ENST00000490692 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
PCSK9-202ENST00000490692 DMTNQ08495 405 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
PCSK9-202ENST00000490692 MYRIPQ8NFW9 859 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
PCSK9-202ENST00000490692 GPRASP1Q5JY77 1395 aa13.85□□□□□ -0.19
PCSK9-202ENST00000490692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.192e-6■□□□□ 11.3
PCSK9-202ENST00000490692 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
PCSK9-202ENST00000490692 ZNF445P59923 1031 aa13.85□□□□□ -0.19
PCSK9-202ENST00000490692 CAMK4Q16566 473 aa13.85□□□□□ -0.19
PCSK9-202ENST00000490692 C16orf71Q8IYS4 520 aaPredicted RBP13.85□□□□□ -0.19
PCSK9-202ENST00000490692 SHANK2Q9UPX8 1470 aa13.85□□□□□ -0.19
PCSK9-202ENST00000490692 BICD2Q8TD16 824 aa13.85□□□□□ -0.19
PCSK9-202ENST00000490692 ATP6V1DQ9Y5K8 247 aa13.85□□□□□ -0.19
PCSK9-202ENST00000490692 ADCY10Q96PN6 1610 aa13.85□□□□□ -0.19
PCSK9-202ENST00000490692 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
PCSK9-202ENST00000490692 KANK1Q14678 1352 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 ERC2O15083 957 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
PCSK9-202ENST00000490692 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 GIMAP6Q6P9H5 292 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCSK9-202ENST00000490692 TSHZ3Q63HK5 1081 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 CABP2Q9NPB3 220 aa13.84□□□□□ -0.19
PCSK9-202ENST00000490692 TMPOP42166 694 aaKnown RBP13.83□□□□□ -0.2
PCSK9-202ENST00000490692 HOMER1Q86YM7 354 aa13.83□□□□□ -0.2
PCSK9-202ENST00000490692 HOMEZQ8IX15 550 aa13.83□□□□□ -0.2
PCSK9-202ENST00000490692 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
PCSK9-202ENST00000490692 BCORL1Q5H9F3 1711 aa13.83□□□□□ -0.2
PCSK9-202ENST00000490692 KIF20AO95235 890 aa13.83□□□□□ -0.2
PCSK9-202ENST00000490692 FOSBP53539 338 aa13.83□□□□□ -0.2
PCSK9-202ENST00000490692 API5Q9BZZ5 524 aaKnown RBP13.83□□□□□ -0.2
PCSK9-202ENST00000490692 PLCH2O75038 1416 aa13.82□□□□□ -0.2
PCSK9-202ENST00000490692 RIOK3O14730 519 aaKnown RBP13.82□□□□□ -0.2
PCSK9-202ENST00000490692 TNNT1P13805 278 aa13.82□□□□□ -0.2
PCSK9-202ENST00000490692 IRX3P78415 501 aaPredicted RBP13.82□□□□□ -0.2
PCSK9-202ENST00000490692 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
PCSK9-202ENST00000490692 ZNF521Q96K83 1311 aa13.82□□□□□ -0.2
PCSK9-202ENST00000490692 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
PCSK9-202ENST00000490692 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
PCSK9-202ENST00000490692 ZBTB9Q96C00 473 aa13.82□□□□□ -0.2
PCSK9-202ENST00000490692 CERS3Q8IU89 383 aa13.81□□□□□ -0.2
PCSK9-202ENST00000490692 ZBTB22O15209 634 aa13.81□□□□□ -0.2
PCSK9-202ENST00000490692 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
PCSK9-202ENST00000490692 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
PCSK9-202ENST00000490692 FERMT3Q86UX7 667 aa13.81□□□□□ -0.2
PCSK9-202ENST00000490692 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
PCSK9-202ENST00000490692 SKIDA1Q1XH10 827 aa13.81□□□□□ -0.2
PCSK9-202ENST00000490692 CNPY4Q8N129 248 aa13.81□□□□□ -0.2
PCSK9-202ENST00000490692 WDR33Q9C0J8 1336 aaKnown RBP13.8□□□□□ -0.2
PCSK9-202ENST00000490692 DDX54Q8TDD1 881 aaKnown RBP13.8□□□□□ -0.2
PCSK9-202ENST00000490692 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
PCSK9-202ENST00000490692 CDC42BPBQ9Y5S2 1711 aa13.8□□□□□ -0.2
PCSK9-202ENST00000490692 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.23e-13■■■■■ 53.6
PCSK9-202ENST00000490692 TMX3Q96JJ7 454 aa13.8□□□□□ -0.2
PCSK9-202ENST00000490692 ARHGEF12Q9NZN5 1544 aa13.8□□□□□ -0.2
PCSK9-202ENST00000490692 CROCC2H7BZ55 1655 aa13.8□□□□□ -0.2
PCSK9-202ENST00000490692 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
PCSK9-202ENST00000490692 POLR3GO15318 223 aaPredicted RBP13.79□□□□□ -0.2
PCSK9-202ENST00000490692 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
PCSK9-202ENST00000490692 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
PCSK9-202ENST00000490692 TEX35Q5T0J7 233 aa13.79□□□□□ -0.2
PCSK9-202ENST00000490692 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
PCSK9-202ENST00000490692 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
PCSK9-202ENST00000490692 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
PCSK9-202ENST00000490692 CCDC183Q5T5S1 534 aa13.79□□□□□ -0.2
PCSK9-202ENST00000490692 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
PCSK9-202ENST00000490692 NSFL1CQ9UNZ2 370 aaKnown RBP13.79□□□□□ -0.2
PCSK9-202ENST00000490692 ATP2B3Q16720 1220 aa13.78□□□□□ -0.2
PCSK9-202ENST00000490692 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
PCSK9-202ENST00000490692 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms