RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RGPD5Q99666 1765 aa20.75■□□□□ 0.91
FDPS-213ENST00000489003 NRAPQ86VF7 1730 aa20.75■□□□□ 0.91
FDPS-213ENST00000489003 MAP3K19Q56UN5 1328 aa20.75■□□□□ 0.91
FDPS-213ENST00000489003 LTN1O94822 1766 aa20.74■□□□□ 0.91
FDPS-213ENST00000489003 RRS1Q15050 365 aaKnown RBP20.74■□□□□ 0.91
FDPS-213ENST00000489003 MORC1Q86VD1 984 aa20.73■□□□□ 0.91
FDPS-213ENST00000489003 IP6K1Q92551 441 aa20.73■□□□□ 0.91
FDPS-213ENST00000489003 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
FDPS-213ENST00000489003 NSD2O96028 1365 aa20.72■□□□□ 0.91
FDPS-213ENST00000489003 MAP2P11137 1827 aaKnown RBP20.72■□□□□ 0.91
FDPS-213ENST00000489003 DDX10Q13206 875 aaKnown RBP20.72■□□□□ 0.91
FDPS-213ENST00000489003 LARP1Q6PKG0 1096 aaKnown RBP20.72■□□□□ 0.91
FDPS-213ENST00000489003 ANKRD26Q9UPS8 1709 aa20.72■□□□□ 0.91
FDPS-213ENST00000489003 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
FDPS-213ENST00000489003 AMPHP49418 695 aa20.71■□□□□ 0.91
FDPS-213ENST00000489003 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
FDPS-213ENST00000489003 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
FDPS-213ENST00000489003 HOXC9P31274 260 aa20.7■□□□□ 0.9
FDPS-213ENST00000489003 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
FDPS-213ENST00000489003 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
FDPS-213ENST00000489003 COL5A2P05997 1499 aaPredicted RBP20.69■□□□□ 0.9
FDPS-213ENST00000489003 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
FDPS-213ENST00000489003 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
FDPS-213ENST00000489003 EMILIN1Q9Y6C2 1016 aa20.68■□□□□ 0.9
FDPS-213ENST00000489003 SPATA31A1Q5TZJ5 1347 aa20.68■□□□□ 0.9
FDPS-213ENST00000489003 NPC1L1Q9UHC9 1359 aa20.68■□□□□ 0.9
FDPS-213ENST00000489003 ONECUT3O60422 494 aaPredicted RBP20.67■□□□□ 0.9
FDPS-213ENST00000489003 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
FDPS-213ENST00000489003 GLI3P10071 1580 aa20.67■□□□□ 0.9
FDPS-213ENST00000489003 CSB-PGBD3P0DP91 1061 aa20.66■□□□□ 0.9
FDPS-213ENST00000489003 HSP90AB2PQ58FF8 381 aa20.66■□□□□ 0.9
FDPS-213ENST00000489003 TOM1L2Q6ZVM7 507 aa20.66■□□□□ 0.9
FDPS-213ENST00000489003 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
FDPS-213ENST00000489003 ABCC6O95255 1503 aa20.66■□□□□ 0.9
FDPS-213ENST00000489003 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
FDPS-213ENST00000489003 ANKRD24Q8TF21 1146 aa20.65■□□□□ 0.9
FDPS-213ENST00000489003 LTV1Q96GA3 475 aaPredicted RBP20.65■□□□□ 0.9
FDPS-213ENST00000489003 PEAK1Q9H792 1746 aa20.64■□□□□ 0.89
FDPS-213ENST00000489003 BLMP54132 1417 aaPredicted RBP20.63■□□□□ 0.89
FDPS-213ENST00000489003 KIF24Q5T7B8 1368 aa20.63■□□□□ 0.89
FDPS-213ENST00000489003 ERBB3P21860 1342 aa20.63■□□□□ 0.89
FDPS-213ENST00000489003 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
FDPS-213ENST00000489003 CRB1P82279 1406 aa20.62■□□□□ 0.89
FDPS-213ENST00000489003 RTL1A6NKG5 1358 aa20.62■□□□□ 0.89
FDPS-213ENST00000489003 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
FDPS-213ENST00000489003 CARD10Q9BWT7 1032 aa20.62■□□□□ 0.89
FDPS-213ENST00000489003 CDK12Q9NYV4 1490 aaPredicted RBP20.62■□□□□ 0.89
FDPS-213ENST00000489003 FLT4P35916 1363 aa20.61■□□□□ 0.89
FDPS-213ENST00000489003 SEPT12Q8IYM1 358 aa20.61■□□□□ 0.89
FDPS-213ENST00000489003 THRAP3Q9Y2W1 955 aaKnown RBP20.61■□□□□ 0.89
FDPS-213ENST00000489003 INSRP06213 1382 aa20.6■□□□□ 0.89
FDPS-213ENST00000489003 BARGINQ6ZT62 677 aa20.6■□□□□ 0.89
FDPS-213ENST00000489003 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
FDPS-213ENST00000489003 RGS12O14924 1447 aa20.59■□□□□ 0.89
FDPS-213ENST00000489003 MTHFSP49914 203 aa20.57■□□□□ 0.88
FDPS-213ENST00000489003 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
FDPS-213ENST00000489003 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
FDPS-213ENST00000489003 RGPD2P0DJD1 1756 aa20.57■□□□□ 0.88
FDPS-213ENST00000489003 A0A0G2JS52 829 aa20.55■□□□□ 0.88
FDPS-213ENST00000489003 MYT1Q01538 1121 aa20.55■□□□□ 0.88
FDPS-213ENST00000489003 BRWD3Q6RI45 1802 aa20.54■□□□□ 0.88
FDPS-213ENST00000489003 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
FDPS-213ENST00000489003 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
FDPS-213ENST00000489003 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
FDPS-213ENST00000489003 EYA1Q99502 592 aa20.51■□□□□ 0.87
FDPS-213ENST00000489003 CDCA7Q9BWT1 371 aaPredicted RBP20.51■□□□□ 0.87
FDPS-213ENST00000489003 THSD7AQ9UPZ6 1657 aa20.51■□□□□ 0.87
FDPS-213ENST00000489003 KRT27Q7Z3Y8 459 aa20.5■□□□□ 0.87
FDPS-213ENST00000489003 USHBP1Q8N6Y0 703 aa20.5■□□□□ 0.87
FDPS-213ENST00000489003 FAM208AQ9UK61 1670 aaKnown RBP20.5■□□□□ 0.87
FDPS-213ENST00000489003 PARD3Q8TEW0 1356 aa20.49■□□□□ 0.87
FDPS-213ENST00000489003 IL2RBP14784 551 aa20.49■□□□□ 0.87
FDPS-213ENST00000489003 DISP2A7MBM2 1401 aa20.48■□□□□ 0.87
FDPS-213ENST00000489003 IL13P35225 146 aa20.48■□□□□ 0.87
FDPS-213ENST00000489003 RALBP1Q15311 655 aa20.48■□□□□ 0.87
FDPS-213ENST00000489003 EXOC5O00471 708 aa20.47■□□□□ 0.87
FDPS-213ENST00000489003 PDE3BQ13370 1112 aa20.47■□□□□ 0.87
FDPS-213ENST00000489003 DDB1Q16531 1140 aa20.47■□□□□ 0.87
FDPS-213ENST00000489003 WNK3Q9BYP7 1800 aa20.46■□□□□ 0.87
FDPS-213ENST00000489003 PARP4Q9UKK3 1724 aaKnown RBP20.46■□□□□ 0.87
FDPS-213ENST00000489003 SOCS7O14512 581 aa20.45■□□□□ 0.86
FDPS-213ENST00000489003 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
FDPS-213ENST00000489003 DIAPH1O60610 1272 aaKnown RBP20.44■□□□□ 0.86
FDPS-213ENST00000489003 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
FDPS-213ENST00000489003 MARCH10Q8NA82 808 aaPredicted RBP20.42■□□□□ 0.86
FDPS-213ENST00000489003 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
FDPS-213ENST00000489003 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
FDPS-213ENST00000489003 NCAPD2Q15021 1401 aa20.42■□□□□ 0.86
FDPS-213ENST00000489003 TATP17735 454 aaPredicted RBP20.41■□□□□ 0.86
FDPS-213ENST00000489003 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
FDPS-213ENST00000489003 ZCRB1Q8TBF4 217 aaKnown RBP20.4■□□□□ 0.86
FDPS-213ENST00000489003 LRRC37A3O60309 1634 aa20.39■□□□□ 0.86
FDPS-213ENST00000489003 MEGF6O75095 1541 aa20.39■□□□□ 0.85
FDPS-213ENST00000489003 COL3A1P02461 1466 aaPredicted RBP20.39■□□□□ 0.85
FDPS-213ENST00000489003 SULT6B1Q6IMI4 303 aa20.39■□□□□ 0.85
FDPS-213ENST00000489003 FAM196AQ6ZSG2 479 aa20.39■□□□□ 0.85
FDPS-213ENST00000489003 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
FDPS-213ENST00000489003 UPF1Q92900 1129 aaKnown RBP eCLIP20.39■□□□□ 0.85
FDPS-213ENST00000489003 DDX54Q8TDD1 881 aaKnown RBP20.37■□□□□ 0.85
FDPS-213ENST00000489003 OVOS2A0A0G2JMS6 1433 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms