RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 SEC24BO95487 1268 aa18.05■□□□□ 0.48
ABCB1-207ENST00000488737 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
ABCB1-207ENST00000488737 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
ABCB1-207ENST00000488737 NME9Q86XW9 330 aa18.05■□□□□ 0.48
ABCB1-207ENST00000488737 COG3Q96JB2 828 aa18.05■□□□□ 0.48
ABCB1-207ENST00000488737 BECN1Q14457 450 aa18.04■□□□□ 0.48
ABCB1-207ENST00000488737 ZBTB40Q9NUA8 1239 aa18.04■□□□□ 0.48
ABCB1-207ENST00000488737 IFT57Q9NWB7 429 aa18.04■□□□□ 0.48
ABCB1-207ENST00000488737 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
ABCB1-207ENST00000488737 GNAI1P63096 354 aa18.03■□□□□ 0.48
ABCB1-207ENST00000488737 LMOD3Q0VAK6 560 aa18.03■□□□□ 0.48
ABCB1-207ENST00000488737 SMC5Q8IY18 1101 aa18.03■□□□□ 0.48
ABCB1-207ENST00000488737 TMEM57Q8N5G2 664 aa18.03■□□□□ 0.48
ABCB1-207ENST00000488737 CHMP4BQ9H444 224 aaKnown RBP18.03■□□□□ 0.48
ABCB1-207ENST00000488737 PTCH1Q13635 1447 aa18.02■□□□□ 0.48
ABCB1-207ENST00000488737 PIK3R4Q99570 1358 aa18.02■□□□□ 0.48
ABCB1-207ENST00000488737 ARHGAP45Q92619 1136 aa18.02■□□□□ 0.48
ABCB1-207ENST00000488737 PHACTR3Q96KR7 559 aa18.02■□□□□ 0.48
ABCB1-207ENST00000488737 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.48
ABCB1-207ENST00000488737 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
ABCB1-207ENST00000488737 FBLN1P23142 703 aa18.01■□□□□ 0.47
ABCB1-207ENST00000488737 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
ABCB1-207ENST00000488737 HMOX1P09601 288 aa18.01■□□□□ 0.47
ABCB1-207ENST00000488737 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
ABCB1-207ENST00000488737 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
ABCB1-207ENST00000488737 PLEKHG1Q9ULL1 1385 aa18■□□□□ 0.47
ABCB1-207ENST00000488737 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.99■□□□□ 0.47
ABCB1-207ENST00000488737 VAMP4O75379 141 aa17.99■□□□□ 0.47
ABCB1-207ENST00000488737 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
ABCB1-207ENST00000488737 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
ABCB1-207ENST00000488737 MRPL50Q8N5N7 158 aaKnown RBP17.98■□□□□ 0.47
ABCB1-207ENST00000488737 ZRANB1Q9UGI0 708 aa17.98■□□□□ 0.47
ABCB1-207ENST00000488737 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
ABCB1-207ENST00000488737 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
ABCB1-207ENST00000488737 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
ABCB1-207ENST00000488737 MBIPQ9NS73 344 aa17.95■□□□□ 0.46
ABCB1-207ENST00000488737 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
ABCB1-207ENST00000488737 NUCB1Q02818 461 aa17.95■□□□□ 0.46
ABCB1-207ENST00000488737 ABCC4O15439 1325 aa17.94■□□□□ 0.46
ABCB1-207ENST00000488737 NCKAP5LQ9HCH0 1330 aa17.94■□□□□ 0.46
ABCB1-207ENST00000488737 RRS1Q15050 365 aaKnown RBP17.94■□□□□ 0.46
ABCB1-207ENST00000488737 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
ABCB1-207ENST00000488737 SETD1BQ9UPS6 1966 aaKnown RBP17.94■□□□□ 0.46
ABCB1-207ENST00000488737 TTC21BQ7Z4L5 1316 aa17.94■□□□□ 0.46
ABCB1-207ENST00000488737 THUMPD2Q9BTF0 503 aaKnown RBP17.93■□□□□ 0.46
ABCB1-207ENST00000488737 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
ABCB1-207ENST00000488737 ZBTB7BO15156 539 aaPredicted RBP17.92■□□□□ 0.46
ABCB1-207ENST00000488737 USP6P35125 1406 aa17.92■□□□□ 0.46
ABCB1-207ENST00000488737 GSE1Q14687 1217 aa17.92■□□□□ 0.46
ABCB1-207ENST00000488737 TWISTNBQ3B726 338 aaPredicted RBP17.92■□□□□ 0.46
ABCB1-207ENST00000488737 TSPYL6Q8N831 410 aa17.91■□□□□ 0.46
ABCB1-207ENST00000488737 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
ABCB1-207ENST00000488737 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
ABCB1-207ENST00000488737 SLIT1O75093 1534 aa17.91■□□□□ 0.46
ABCB1-207ENST00000488737 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
ABCB1-207ENST00000488737 HAP1P54257 671 aaPredicted RBP17.9■□□□□ 0.46
ABCB1-207ENST00000488737 ACEP12821 1306 aa17.9■□□□□ 0.46
ABCB1-207ENST00000488737 ARHGAP23Q9P227 1491 aa17.9■□□□□ 0.46
ABCB1-207ENST00000488737 PEAK1Q9H792 1746 aa17.9■□□□□ 0.46
ABCB1-207ENST00000488737 FMN2Q9NZ56 1722 aa17.9■□□□□ 0.46
ABCB1-207ENST00000488737 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
ABCB1-207ENST00000488737 CHD1LQ86WJ1 897 aa17.89■□□□□ 0.45
ABCB1-207ENST00000488737 DIP2AQ14689 1571 aa17.89■□□□□ 0.45
ABCB1-207ENST00000488737 SSH2Q76I76 1423 aa17.89■□□□□ 0.45
ABCB1-207ENST00000488737 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
ABCB1-207ENST00000488737 C22orf23Q9BZE7 217 aa17.88■□□□□ 0.45
ABCB1-207ENST00000488737 LTKP29376 864 aa17.88■□□□□ 0.45
ABCB1-207ENST00000488737 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
ABCB1-207ENST00000488737 ANTXR1Q9H6X2 564 aa17.88■□□□□ 0.45
ABCB1-207ENST00000488737 PTPRUQ92729 1446 aa17.88■□□□□ 0.45
ABCB1-207ENST00000488737 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
ABCB1-207ENST00000488737 TTC21AQ8NDW8 1320 aa17.87■□□□□ 0.45
ABCB1-207ENST00000488737 KIAA0232Q92628 1395 aa17.86■□□□□ 0.45
ABCB1-207ENST00000488737 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
ABCB1-207ENST00000488737 ARHGEF10O15013 1369 aa17.85■□□□□ 0.45
ABCB1-207ENST00000488737 BMP2KLQ5H9B9 411 aa17.85■□□□□ 0.45
ABCB1-207ENST00000488737 ZNF142P52746 1687 aaPredicted RBP17.85■□□□□ 0.45
ABCB1-207ENST00000488737 FAM83GA6ND36 823 aa17.84■□□□□ 0.45
ABCB1-207ENST00000488737 MFAP1P55081 439 aaKnown RBP17.84■□□□□ 0.45
ABCB1-207ENST00000488737 SULT6B1Q6IMI4 303 aa17.84■□□□□ 0.45
ABCB1-207ENST00000488737 LNPKQ9C0E8 428 aa17.84■□□□□ 0.45
ABCB1-207ENST00000488737 TBX22Q9Y458 520 aa17.84■□□□□ 0.45
ABCB1-207ENST00000488737 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
ABCB1-207ENST00000488737 ELL2O00472 640 aaPredicted RBP17.83■□□□□ 0.44
ABCB1-207ENST00000488737 CHL1O00533 1208 aa17.83■□□□□ 0.44
ABCB1-207ENST00000488737 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
ABCB1-207ENST00000488737 XRN1Q8IZH2 1706 aaKnown RBP17.82■□□□□ 0.44
ABCB1-207ENST00000488737 RBM25P49756 843 aaKnown RBP17.82■□□□□ 0.44
ABCB1-207ENST00000488737 INTS3Q68E01 1043 aaKnown RBP17.82■□□□□ 0.44
ABCB1-207ENST00000488737 SLKQ9H2G2 1235 aaPredicted RBP17.82■□□□□ 0.44
ABCB1-207ENST00000488737 DCTN1Q14203 1278 aa17.81■□□□□ 0.44
ABCB1-207ENST00000488737 KDM4FA0A1W2PPD8 638 aa17.8■□□□□ 0.44
ABCB1-207ENST00000488737 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
ABCB1-207ENST00000488737 SIRT2Q8IXJ6 389 aa17.8■□□□□ 0.44
ABCB1-207ENST00000488737 USP54Q70EL1 1684 aa17.8■□□□□ 0.44
ABCB1-207ENST00000488737 SBNO1A3KN83 1393 aa17.8■□□□□ 0.44
ABCB1-207ENST00000488737 AMOTL2Q9Y2J4 779 aa17.8■□□□□ 0.44
ABCB1-207ENST00000488737 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
ABCB1-207ENST00000488737 FLT4P35916 1363 aa17.79■□□□□ 0.44
ABCB1-207ENST00000488737 PTPRCP08575 1304 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms