RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 GNAI3P08754 354 aa11.92□□□□□ -0.5
ZEB1-206ENST00000488625 ZKSCAN1P17029 563 aaPredicted RBP11.92□□□□□ -0.5
ZEB1-206ENST00000488625 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
ZEB1-206ENST00000488625 GAS2L2Q8NHY3 880 aa11.92□□□□□ -0.5
ZEB1-206ENST00000488625 SYNMO15061 1565 aa11.92□□□□□ -0.5
ZEB1-206ENST00000488625 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
ZEB1-206ENST00000488625 CARD14Q9BXL6 1004 aa11.92□□□□□ -0.5
ZEB1-206ENST00000488625 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
ZEB1-206ENST00000488625 RNF214Q8ND24 703 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 FAM13BQ9NYF5 915 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 PREX2Q70Z35 1606 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 TPM2P07951 284 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 FAM184AQ8NB25 1140 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 LRRCC1Q9C099 1032 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 MCM2P49736 904 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 HSP90AB4PQ58FF6 505 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
ZEB1-206ENST00000488625 CCDC27Q2M243 656 aa11.91□□□□□ -0.5
ZEB1-206ENST00000488625 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
ZEB1-206ENST00000488625 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
ZEB1-206ENST00000488625 HDAC1Q13547 482 aaPredicted RBP11.9□□□□□ -0.5
ZEB1-206ENST00000488625 WAPLQ7Z5K2 1190 aa11.9□□□□□ -0.5
ZEB1-206ENST00000488625 IL16Q14005 1332 aa11.9□□□□□ -0.5
ZEB1-206ENST00000488625 PRDM15P57071 1507 aaPredicted RBP11.9□□□□□ -0.5
ZEB1-206ENST00000488625 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
ZEB1-206ENST00000488625 SMARCA5O60264 1052 aaPredicted RBP11.9□□□□□ -0.5
ZEB1-206ENST00000488625 MBD3O95983 291 aa11.9□□□□□ -0.5
ZEB1-206ENST00000488625 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.51
ZEB1-206ENST00000488625 NUCB1Q02818 461 aa11.9□□□□□ -0.51
ZEB1-206ENST00000488625 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.51
ZEB1-206ENST00000488625 SEC24BO95487 1268 aa11.89□□□□□ -0.51
ZEB1-206ENST00000488625 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
ZEB1-206ENST00000488625 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZEB1-206ENST00000488625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZEB1-206ENST00000488625 RLBP1P12271 317 aa11.89□□□□□ -0.51
ZEB1-206ENST00000488625 RPAP2Q8IXW5 612 aaPredicted RBP11.88□□□□□ -0.51
ZEB1-206ENST00000488625 TTC5Q8N0Z6 440 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 ATP7AQ04656 1500 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 G3V3G9 751 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
ZEB1-206ENST00000488625 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 NME9Q86XW9 330 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 GOLGA6L19H0YKK7 550 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 RNF20Q5VTR2 975 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 NUDT16Q96DE0 195 aaKnown RBP11.88□□□□□ -0.51
ZEB1-206ENST00000488625 KIF3AQ9Y496 699 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
ZEB1-206ENST00000488625 NEXNQ0ZGT2 675 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 TBC1D9Q6ZT07 1266 aa11.88□□□□□ -0.51
ZEB1-206ENST00000488625 SSFA2P28290 1259 aa11.87□□□□□ -0.51
ZEB1-206ENST00000488625 MCM10Q7L590 875 aa11.87□□□□□ -0.51
ZEB1-206ENST00000488625 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
ZEB1-206ENST00000488625 NPC1L1Q9UHC9 1359 aa11.87□□□□□ -0.51
ZEB1-206ENST00000488625 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
ZEB1-206ENST00000488625 DDX58O95786 925 aaKnown RBP11.87□□□□□ -0.51
ZEB1-206ENST00000488625 NLRP6P59044 892 aa11.87□□□□□ -0.51
ZEB1-206ENST00000488625 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
ZEB1-206ENST00000488625 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
ZEB1-206ENST00000488625 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
ZEB1-206ENST00000488625 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
ZEB1-206ENST00000488625 BMP2KLQ5H9B9 411 aa11.86□□□□□ -0.51
ZEB1-206ENST00000488625 MBIPQ9NS73 344 aa11.86□□□□□ -0.51
ZEB1-206ENST00000488625 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
ZEB1-206ENST00000488625 ESPNB1AK53 854 aa11.86□□□□□ -0.51
ZEB1-206ENST00000488625 SF3A1Q15459 793 aaKnown RBP11.86□□□□□ -0.51
ZEB1-206ENST00000488625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
ZEB1-206ENST00000488625 SHROOM2Q13796 1616 aa11.85□□□□□ -0.51
ZEB1-206ENST00000488625 IDI1Q13907 227 aa11.85□□□□□ -0.51
ZEB1-206ENST00000488625 FOSBP53539 338 aa11.84□□□□□ -0.51
ZEB1-206ENST00000488625 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
ZEB1-206ENST00000488625 SRCIN1Q9C0H9 1055 aa11.84□□□□□ -0.51
ZEB1-206ENST00000488625 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
ZEB1-206ENST00000488625 ABTB2Q8N961 1025 aa11.84□□□□□ -0.51
ZEB1-206ENST00000488625 BECN2A8MW95 431 aa11.84□□□□□ -0.51
ZEB1-206ENST00000488625 PSMA5P28066 241 aa11.84□□□□□ -0.51
ZEB1-206ENST00000488625 TNRQ92752 1358 aa11.83□□□□□ -0.51
ZEB1-206ENST00000488625 ZNF592Q92610 1267 aa11.83□□□□□ -0.52
ZEB1-206ENST00000488625 WDR33Q9C0J8 1336 aaKnown RBP11.83□□□□□ -0.52
ZEB1-206ENST00000488625 RIC3Q7Z5B4 369 aa11.83□□□□□ -0.52
ZEB1-206ENST00000488625 RBM10P98175 930 aaKnown RBP11.83□□□□□ -0.52
ZEB1-206ENST00000488625 MRPL50Q8N5N7 158 aaKnown RBP11.83□□□□□ -0.52
ZEB1-206ENST00000488625 PLXNC1O60486 1568 aa11.83□□□□□ -0.52
ZEB1-206ENST00000488625 ABCC1P33527 1531 aa11.83□□□□□ -0.52
ZEB1-206ENST00000488625 CDK11BP21127 795 aaKnown RBP11.83□□□□□ -0.52
ZEB1-206ENST00000488625 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
ZEB1-206ENST00000488625 FBXO31Q5XUX0 539 aaPredicted RBP11.83□□□□□ -0.52
ZEB1-206ENST00000488625 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 FSD1Q9BTV5 496 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 FAM83GA6ND36 823 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 FYB1O15117 783 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 TRPM2O94759 1503 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 FBLN1P23142 703 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 EXOC6BQ9Y2D4 811 aa11.82□□□□□ -0.52
ZEB1-206ENST00000488625 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms