RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 C1QTNF2Q9BXJ5 285 aa8.6□□□□□ -1.03
USP9X-208ENST00000487625 AGERQ15109 404 aa8.59□□□□□ -1.03
USP9X-208ENST00000487625 CCDC116Q8IYX3 515 aa8.59□□□□□ -1.03
USP9X-208ENST00000487625 MBIPQ9NS73 344 aa8.59□□□□□ -1.03
USP9X-208ENST00000487625 MAP10Q9P2G4 905 aa8.59□□□□□ -1.03
USP9X-208ENST00000487625 MAP4K5Q9Y4K4 846 aa8.59□□□□□ -1.03
USP9X-208ENST00000487625 IGF1RP08069 1367 aa8.59□□□□□ -1.03
USP9X-208ENST00000487625 ACDQ96AP0 544 aa8.58□□□□□ -1.04
USP9X-208ENST00000487625 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
USP9X-208ENST00000487625 F12P00748 615 aaPredicted RBP8.57□□□□□ -1.04
USP9X-208ENST00000487625 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
USP9X-208ENST00000487625 LYPD8Q6UX82 237 aa8.57□□□□□ -1.04
USP9X-208ENST00000487625 BPHLQ86WA6 291 aaPredicted RBP8.57□□□□□ -1.04
USP9X-208ENST00000487625 P3H3Q8IVL6 736 aa8.57□□□□□ -1.04
USP9X-208ENST00000487625 COL8A1P27658 744 aa8.56□□□□□ -1.04
USP9X-208ENST00000487625 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
USP9X-208ENST00000487625 RNF217Q8TC41 542 aa8.56□□□□□ -1.04
USP9X-208ENST00000487625 NDUFV2P19404 249 aa8.55□□□□□ -1.04
USP9X-208ENST00000487625 SNRPNP63162 240 aaKnown RBP8.55□□□□□ -1.04
USP9X-208ENST00000487625 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
USP9X-208ENST00000487625 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
USP9X-208ENST00000487625 MTMR2Q13614 643 aa8.54□□□□□ -1.04
USP9X-208ENST00000487625 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
USP9X-208ENST00000487625 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
USP9X-208ENST00000487625 ZMYM1Q5SVZ6 1142 aa8.53□□□□□ -1.04
USP9X-208ENST00000487625 AGBL1Q96MI9 1066 aa8.53□□□□□ -1.04
USP9X-208ENST00000487625 TSHZ2Q9NRE2 1034 aa8.53□□□□□ -1.04
USP9X-208ENST00000487625 GPR25O00155 361 aa8.52□□□□□ -1.05
USP9X-208ENST00000487625 TRMT44Q8IYL2 757 aaKnown RBP8.52□□□□□ -1.05
USP9X-208ENST00000487625 ZNF837Q96EG3 531 aaPredicted RBP8.52□□□□□ -1.05
USP9X-208ENST00000487625 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.05
USP9X-208ENST00000487625 MOXD2PA6NHM9 499 aa8.51□□□□□ -1.05
USP9X-208ENST00000487625 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
USP9X-208ENST00000487625 ALYREFQ86V81 257 aaKnown RBP8.51□□□□□ -1.05
USP9X-208ENST00000487625 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
USP9X-208ENST00000487625 POLMQ9NP87 494 aaPredicted RBP8.51□□□□□ -1.05
USP9X-208ENST00000487625 LRRC4BQ9NT99 713 aa8.51□□□□□ -1.05
USP9X-208ENST00000487625 IRF6O14896 467 aa8.5□□□□□ -1.05
USP9X-208ENST00000487625 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
USP9X-208ENST00000487625 RELBQ01201 579 aa8.49□□□□□ -1.05
USP9X-208ENST00000487625 OIP5O43482 229 aa8.48□□□□□ -1.05
USP9X-208ENST00000487625 SEMA6BQ9H3T3 888 aa8.48□□□□□ -1.05
USP9X-208ENST00000487625 CFAP99D6REC4 459 aa8.47□□□□□ -1.05
USP9X-208ENST00000487625 CLCN1P35523 988 aa8.47□□□□□ -1.05
USP9X-208ENST00000487625 FOXD4L6Q3SYB3 417 aaPredicted RBP8.47□□□□□ -1.05
USP9X-208ENST00000487625 FOXD4L5Q5VV16 416 aaPredicted RBP8.47□□□□□ -1.05
USP9X-208ENST00000487625 FOXD4L3Q6VB84 417 aaPredicted RBP8.47□□□□□ -1.05
USP9X-208ENST00000487625 C1QTNF9BB2RNN3 333 aa8.46□□□□□ -1.06
USP9X-208ENST00000487625 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
USP9X-208ENST00000487625 KRTAP4-7Q9BYR0 210 aa8.46□□□□□ -1.06
USP9X-208ENST00000487625 MKL2Q9ULH7 1088 aa8.46□□□□□ -1.06
USP9X-208ENST00000487625 TRIM22Q8IYM9 498 aa8.45□□□□□ -1.06
USP9X-208ENST00000487625 ZNF395Q9H8N7 513 aaPredicted RBP8.45□□□□□ -1.06
USP9X-208ENST00000487625 CD163Q86VB7 1156 aa8.44□□□□□ -1.06
USP9X-208ENST00000487625 GOLGA2P5Q9HBQ8 144 aa8.44□□□□□ -1.06
USP9X-208ENST00000487625 MAGEB6P1A0A0J9YX57 407 aa8.43□□□□□ -1.06
USP9X-208ENST00000487625 SHISA8B8ZZ34 492 aa8.43□□□□□ -1.06
USP9X-208ENST00000487625 SUV39H2Q9H5I1 410 aa8.43□□□□□ -1.06
USP9X-208ENST00000487625 GRIN2CQ14957 1233 aa8.42□□□□□ -1.06
USP9X-208ENST00000487625 DBN1Q16643 649 aa8.42□□□□□ -1.06
USP9X-208ENST00000487625 CCDC102AQ96A19 550 aa8.42□□□□□ -1.06
USP9X-208ENST00000487625 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
USP9X-208ENST00000487625 SCO2A0A1W2PP80 73 aa8.41□□□□□ -1.06
USP9X-208ENST00000487625 PER1O15534 1290 aaPredicted RBP8.41□□□□□ -1.06
USP9X-208ENST00000487625 CHRNA4P43681 627 aa8.41□□□□□ -1.06
USP9X-208ENST00000487625 DOC2BQ14184 412 aa8.4□□□□□ -1.06
USP9X-208ENST00000487625 FOXR1Q6PIV2 292 aa8.4□□□□□ -1.06
USP9X-208ENST00000487625 GTPBP3Q969Y2 492 aaKnown RBP8.4□□□□□ -1.06
USP9X-208ENST00000487625 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
USP9X-208ENST00000487625 ERFEQ4G0M1 354 aa8.39□□□□□ -1.07
USP9X-208ENST00000487625 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
USP9X-208ENST00000487625 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
USP9X-208ENST00000487625 CARD14Q9BXL6 1004 aa8.39□□□□□ -1.07
USP9X-208ENST00000487625 MX2P20592 715 aa8.38□□□□□ -1.07
USP9X-208ENST00000487625 NBPF14Q5TI25 921 aa8.38□□□□□ -1.07
USP9X-208ENST00000487625 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
USP9X-208ENST00000487625 OXCT2Q9BYC2 517 aaPredicted RBP8.38□□□□□ -1.07
USP9X-208ENST00000487625 RHOQP17081 205 aa8.37□□□□□ -1.07
USP9X-208ENST00000487625 HOXB4P17483 251 aaPredicted RBP8.37□□□□□ -1.07
USP9X-208ENST00000487625 LINC00114Q6XXX2 140 aa8.37□□□□□ -1.07
USP9X-208ENST00000487625 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
USP9X-208ENST00000487625 LCE1DQ5T752 114 aa8.36□□□□□ -1.07
USP9X-208ENST00000487625 RRAGCQ9HB90 399 aa8.36□□□□□ -1.07
USP9X-208ENST00000487625 PCDHB15Q9Y5E8 787 aa8.36□□□□□ -1.07
USP9X-208ENST00000487625 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
USP9X-208ENST00000487625 ARTNQ5T4W7 220 aa8.35□□□□□ -1.07
USP9X-208ENST00000487625 RIPOR1Q6ZS17 1223 aa8.35□□□□□ -1.07
USP9X-208ENST00000487625 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
USP9X-208ENST00000487625 KCTD15Q96SI1 283 aaPredicted RBP8.35□□□□□ -1.07
USP9X-208ENST00000487625 ZFP64Q9NPA5 681 aa8.35□□□□□ -1.07
USP9X-208ENST00000487625 HRCP23327 699 aa8.34□□□□□ -1.07
USP9X-208ENST00000487625 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
USP9X-208ENST00000487625 PRICKLE2Q7Z3G6 844 aa8.34□□□□□ -1.07
USP9X-208ENST00000487625 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
USP9X-208ENST00000487625 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
USP9X-208ENST00000487625 ADH1AP07327 375 aa8.33□□□□□ -1.08
USP9X-208ENST00000487625 GJA5P36382 358 aa8.33□□□□□ -1.08
USP9X-208ENST00000487625 INTS6LQ5JSJ4 861 aaKnown RBP8.33□□□□□ -1.08
USP9X-208ENST00000487625 RSBN1LQ6PCB5 846 aaPredicted RBP8.33□□□□□ -1.08
USP9X-208ENST00000487625 MAP2K3P46734 347 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms