RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 BLMP54132 1417 aaPredicted RBP19.22■□□□□ 0.67
GCA-210ENST00000487445 APAF1O14727 1248 aa19.22■□□□□ 0.67
GCA-210ENST00000487445 USP54Q70EL1 1684 aa19.22■□□□□ 0.67
GCA-210ENST00000487445 NHSL1Q5SYE7 1610 aa19.21■□□□□ 0.67
GCA-210ENST00000487445 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
GCA-210ENST00000487445 RUNDC1Q96C34 613 aa19.21■□□□□ 0.67
GCA-210ENST00000487445 RTL1A6NKG5 1358 aa19.21■□□□□ 0.67
GCA-210ENST00000487445 PEAK1Q9H792 1746 aa19.2■□□□□ 0.66
GCA-210ENST00000487445 FCHSD2O94868 740 aa19.2■□□□□ 0.66
GCA-210ENST00000487445 AXIN2Q9Y2T1 843 aa19.2■□□□□ 0.66
GCA-210ENST00000487445 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
GCA-210ENST00000487445 ZBED9Q6R2W3 1325 aa19.19■□□□□ 0.66
GCA-210ENST00000487445 SULT6B1Q6IMI4 303 aa19.19■□□□□ 0.66
GCA-210ENST00000487445 AHDC1Q5TGY3 1603 aaPredicted RBP19.19■□□□□ 0.66
GCA-210ENST00000487445 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
GCA-210ENST00000487445 PRKAR2BP31323 418 aa19.18■□□□□ 0.66
GCA-210ENST00000487445 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
GCA-210ENST00000487445 EYA1Q99502 592 aa19.18■□□□□ 0.66
GCA-210ENST00000487445 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
GCA-210ENST00000487445 PRDM11Q9NQV5 511 aa19.18■□□□□ 0.66
GCA-210ENST00000487445 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
GCA-210ENST00000487445 AEBP1Q8IUX7 1158 aa19.18■□□□□ 0.66
GCA-210ENST00000487445 NEFMP07197 916 aa19.17■□□□□ 0.66
GCA-210ENST00000487445 TCP11L2Q8N4U5 519 aa19.17■□□□□ 0.66
GCA-210ENST00000487445 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
GCA-210ENST00000487445 RSPH6AQ9H0K4 717 aa19.17■□□□□ 0.66
GCA-210ENST00000487445 RRP7AQ9Y3A4 280 aaKnown RBP19.17■□□□□ 0.66
GCA-210ENST00000487445 ANKRD24Q8TF21 1146 aa19.16■□□□□ 0.66
GCA-210ENST00000487445 PLEKHF1Q96S99 279 aa19.16■□□□□ 0.66
GCA-210ENST00000487445 CPDO75976 1380 aa19.14■□□□□ 0.66
GCA-210ENST00000487445 USHBP1Q8N6Y0 703 aa19.14■□□□□ 0.65
GCA-210ENST00000487445 CSB-PGBD3P0DP91 1061 aa19.13■□□□□ 0.65
GCA-210ENST00000487445 NBPF6Q5VWK0 638 aa19.13■□□□□ 0.65
GCA-210ENST00000487445 PHACTR3Q96KR7 559 aa19.13■□□□□ 0.65
GCA-210ENST00000487445 NBPF4Q96M43 638 aa19.13■□□□□ 0.65
GCA-210ENST00000487445 IGSF1Q8N6C5 1336 aa19.13■□□□□ 0.65
GCA-210ENST00000487445 NUTM2BA6NNL0 878 aaPredicted RBP19.12■□□□□ 0.65
GCA-210ENST00000487445 NUTM2EB1AL46 878 aaPredicted RBP19.12■□□□□ 0.65
GCA-210ENST00000487445 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
GCA-210ENST00000487445 PHRF1Q9P1Y6 1649 aaKnown RBP19.11■□□□□ 0.65
GCA-210ENST00000487445 FAM83GA6ND36 823 aa19.11■□□□□ 0.65
GCA-210ENST00000487445 PHLPP1O60346 1717 aa19.11■□□□□ 0.65
GCA-210ENST00000487445 ERBB3P21860 1342 aa19.11■□□□□ 0.65
GCA-210ENST00000487445 ADAMTS2O95450 1211 aa19.1■□□□□ 0.65
GCA-210ENST00000487445 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
GCA-210ENST00000487445 LTN1O94822 1766 aa19.09■□□□□ 0.65
GCA-210ENST00000487445 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
GCA-210ENST00000487445 COL16A1Q07092 1604 aaPredicted RBP19.09■□□□□ 0.65
GCA-210ENST00000487445 HSPA1LP34931 641 aa19.08■□□□□ 0.64
GCA-210ENST00000487445 RIPK4P57078 832 aa19.08■□□□□ 0.64
GCA-210ENST00000487445 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
GCA-210ENST00000487445 EVA1CP58658 441 aa19.07■□□□□ 0.64
GCA-210ENST00000487445 STRN4Q9NRL3 753 aa19.07■□□□□ 0.64
GCA-210ENST00000487445 KDRP35968 1356 aa19.06■□□□□ 0.64
GCA-210ENST00000487445 WWC1Q8IX03 1113 aa19.06■□□□□ 0.64
GCA-210ENST00000487445 CDCA7LQ96GN5 454 aa19.06■□□□□ 0.64
GCA-210ENST00000487445 CRYBG1Q9Y4K1 1723 aa19.05■□□□□ 0.64
GCA-210ENST00000487445 JCADQ9P266 1359 aa19.05■□□□□ 0.64
GCA-210ENST00000487445 NFE2L2Q16236 605 aa19.05■□□□□ 0.64
GCA-210ENST00000487445 BTG4Q9NY30 223 aa19.05■□□□□ 0.64
GCA-210ENST00000487445 GOLGA2Q08379 1002 aa19.04■□□□□ 0.64
GCA-210ENST00000487445 TOM1L2Q6ZVM7 507 aa19.04■□□□□ 0.64
GCA-210ENST00000487445 ZNF521Q96K83 1311 aa19.03■□□□□ 0.64
GCA-210ENST00000487445 PDE3BQ13370 1112 aa19.03■□□□□ 0.64
GCA-210ENST00000487445 MTHFSDQ2M296 383 aaKnown RBP19.02■□□□□ 0.64
GCA-210ENST00000487445 CAMTA1Q9Y6Y1 1673 aa19.02■□□□□ 0.63
GCA-210ENST00000487445 CCDC27Q2M243 656 aa19.02■□□□□ 0.63
GCA-210ENST00000487445 TRIM35Q9UPQ4 493 aa19.02■□□□□ 0.63
GCA-210ENST00000487445 WDR17Q8IZU2 1322 aa19.01■□□□□ 0.63
GCA-210ENST00000487445 RGPD1P0DJD0 1748 aa19.01■□□□□ 0.63
GCA-210ENST00000487445 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
GCA-210ENST00000487445 LARP1Q6PKG0 1096 aaKnown RBP19■□□□□ 0.63
GCA-210ENST00000487445 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
GCA-210ENST00000487445 RAPGEF4Q8WZA2 1011 aa19■□□□□ 0.63
GCA-210ENST00000487445 ABCC6O95255 1503 aa19■□□□□ 0.63
GCA-210ENST00000487445 COL5A2P05997 1499 aaPredicted RBP18.99■□□□□ 0.63
GCA-210ENST00000487445 ABCA3Q99758 1704 aa18.99■□□□□ 0.63
GCA-210ENST00000487445 GAS2L2Q8NHY3 880 aa18.99■□□□□ 0.63
GCA-210ENST00000487445 USP35Q9P2H5 1018 aa18.99■□□□□ 0.63
GCA-210ENST00000487445 COL18A1P39060 1754 aa18.98■□□□□ 0.63
GCA-210ENST00000487445 SPINK5Q9NQ38 1064 aaPredicted RBP18.98■□□□□ 0.63
GCA-210ENST00000487445 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
GCA-210ENST00000487445 WDR63Q8IWG1 891 aa18.97■□□□□ 0.63
GCA-210ENST00000487445 THUMPD2Q9BTF0 503 aaKnown RBP18.97■□□□□ 0.63
GCA-210ENST00000487445 DCTN1Q14203 1278 aa18.97■□□□□ 0.63
GCA-210ENST00000487445 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
GCA-210ENST00000487445 SPATA31A6Q5VVP1 1343 aa18.96■□□□□ 0.63
GCA-210ENST00000487445 E9PSI1 815 aa18.96■□□□□ 0.63
GCA-210ENST00000487445 TATP17735 454 aaPredicted RBP18.96■□□□□ 0.63
GCA-210ENST00000487445 SLFN5Q08AF3 891 aa18.96■□□□□ 0.63
GCA-210ENST00000487445 PLEKHO1Q53GL0 409 aaPredicted RBP18.96■□□□□ 0.63
GCA-210ENST00000487445 RTF1Q92541 710 aaKnown RBP18.95■□□□□ 0.62
GCA-210ENST00000487445 NGLY1Q96IV0 654 aa18.95■□□□□ 0.62
GCA-210ENST00000487445 CARD10Q9BWT7 1032 aa18.95■□□□□ 0.62
GCA-210ENST00000487445 AMOTQ4VCS5 1084 aa18.95■□□□□ 0.62
GCA-210ENST00000487445 LMO7Q8WWI1 1683 aa18.94■□□□□ 0.62
GCA-210ENST00000487445 NCAPD2Q15021 1401 aa18.94■□□□□ 0.62
GCA-210ENST00000487445 MCM10Q7L590 875 aa18.94■□□□□ 0.62
GCA-210ENST00000487445 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
GCA-210ENST00000487445 RGPD5Q99666 1765 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms